RNA–Protein interactions for RNA: ENST00000479199.1

GCA-208, Transcript of grancalcin, humanhuman

TSL 2

Gene GCA, Length 597 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-208ENST00000479199 SLFN14P0C7P3 912 aa12.6□□□□□ -0.39
GCA-208ENST00000479199 ZSCAN22P10073 491 aaPredicted RBP12.6□□□□□ -0.39
GCA-208ENST00000479199 RALAP11233 206 aa12.6□□□□□ -0.39
GCA-208ENST00000479199 RDXP35241 583 aaKnown RBP12.6□□□□□ -0.39
GCA-208ENST00000479199 VAMP7P51809 220 aa12.6□□□□□ -0.39
GCA-208ENST00000479199 PPP3CAQ08209 521 aa12.6□□□□□ -0.39
GCA-208ENST00000479199 SCAPQ12770 1279 aa12.6□□□□□ -0.39
GCA-208ENST00000479199 EFEMP1Q12805 493 aa12.6□□□□□ -0.39
GCA-208ENST00000479199 SLC14A1Q13336 389 aa12.6□□□□□ -0.39
GCA-208ENST00000479199 ENPP2Q13822 863 aa12.6□□□□□ -0.39
GCA-208ENST00000479199 PKP1Q13835 747 aa12.6□□□□□ -0.39
GCA-208ENST00000479199 ZNF234Q14588 700 aa12.6□□□□□ -0.39
GCA-208ENST00000479199 LRSAM1Q6UWE0 723 aa12.6□□□□□ -0.39
GCA-208ENST00000479199 ANKS1BQ7Z6G8 1248 aa12.6□□□□□ -0.39
GCA-208ENST00000479199 TADA2BQ86TJ2 420 aa12.6□□□□□ -0.39
GCA-208ENST00000479199 ADAMTS14Q8WXS8 1223 aa12.6□□□□□ -0.39
GCA-208ENST00000479199 SORCS1Q8WY21 1168 aa12.6□□□□□ -0.39
GCA-208ENST00000479199 IMPG2Q9BZV3 1241 aa12.6□□□□□ -0.39
GCA-208ENST00000479199 CLEC4EQ9ULY5 219 aa12.6□□□□□ -0.39
GCA-208ENST00000479199 FRMD4BQ9Y2L6 1034 aa12.6□□□□□ -0.39
GCA-208ENST00000479199 PCDHB9Q9Y5E1 797 aa12.6□□□□□ -0.39
GCA-208ENST00000479199 PRR29P0C7W0 189 aa12.59□□□□□ -0.39
GCA-208ENST00000479199 PDIA4P13667 645 aaKnown RBP12.59□□□□□ -0.39
GCA-208ENST00000479199 PFKFB1P16118 471 aa12.59□□□□□ -0.39
GCA-208ENST00000479199 NR2F2P24468 414 aa12.59□□□□□ -0.39
GCA-208ENST00000479199 PSEN1P49768 467 aa12.59□□□□□ -0.39
GCA-208ENST00000479199 TPMTP51580 245 aa12.59□□□□□ -0.39
GCA-208ENST00000479199 BNC1Q01954 994 aa12.59□□□□□ -0.39
GCA-208ENST00000479199 DNM1Q05193 864 aaKnown RBP12.59□□□□□ -0.39
GCA-208ENST00000479199 ZNF394Q53GI3 561 aa12.59□□□□□ -0.39
GCA-208ENST00000479199 DCAF12L1Q5VU92 463 aa12.59□□□□□ -0.39
GCA-208ENST00000479199 METTL3Q86U44 580 aaKnown RBP12.59□□□□□ -0.39
GCA-208ENST00000479199 TMPRSS6Q8IU80 811 aa12.59□□□□□ -0.39
GCA-208ENST00000479199 DENND1CQ8IV53 801 aa12.59□□□□□ -0.39
GCA-208ENST00000479199 RBBP8NLQ8NC74 664 aaPredicted RBP12.59□□□□□ -0.39
GCA-208ENST00000479199 DNASE2BQ8WZ79 361 aa12.59□□□□□ -0.39
GCA-208ENST00000479199 PIWIL1Q96J94 861 aaKnown RBP12.59□□□□□ -0.39
GCA-208ENST00000479199 DUSP16Q9BY84 665 aa12.59□□□□□ -0.39
GCA-208ENST00000479199 ZDHHC5Q9C0B5 715 aa12.59□□□□□ -0.39
GCA-208ENST00000479199 CYP3A43Q9HB55 503 aa12.59□□□□□ -0.39
GCA-208ENST00000479199 ITM2CQ9NQX7 267 aa12.59□□□□□ -0.39
GCA-208ENST00000479199 CLIC5Q9NZA1 410 aa12.59□□□□□ -0.39
GCA-208ENST00000479199 PCOLCE2Q9UKZ9 415 aa12.59□□□□□ -0.39
GCA-208ENST00000479199 AGO1Q9UL18 857 aaKnown RBP12.59□□□□□ -0.39
GCA-208ENST00000479199 FNDC3AQ9Y2H6 1198 aaKnown RBP12.59□□□□□ -0.39
GCA-208ENST00000479199 USP3Q9Y6I4 520 aa12.59□□□□□ -0.39
GCA-208ENST00000479199 SLCO1B1Q9Y6L6 691 aa12.59□□□□□ -0.39
GCA-208ENST00000479199 URB1O60287 2271 aaKnown RBP12.58□□□□□ -0.4
GCA-208ENST00000479199 A0A1B0GVL5 298 aa12.58□□□□□ -0.4
GCA-208ENST00000479199 CALUO43852 315 aaPredicted RBP12.58□□□□□ -0.4
GCA-208ENST00000479199 SYNCRIPO60506 623 aaKnown RBP12.58□□□□□ -0.4
GCA-208ENST00000479199 CBFA2T3O75081 653 aa12.58□□□□□ -0.4
GCA-208ENST00000479199 CHKAP35790 457 aa12.58□□□□□ -0.4
GCA-208ENST00000479199 COPAP53621 1224 aa12.58□□□□□ -0.4
GCA-208ENST00000479199 ACAP1Q15027 740 aa12.58□□□□□ -0.4
GCA-208ENST00000479199 TMEM215Q68D42 235 aa12.58□□□□□ -0.4
GCA-208ENST00000479199 C19orf48Q6RUI8 117 aa12.58□□□□□ -0.4
GCA-208ENST00000479199 SLCO6A1Q86UG4 719 aa12.58□□□□□ -0.4
GCA-208ENST00000479199 FAM124AQ86V42 546 aa12.58□□□□□ -0.4
GCA-208ENST00000479199 ZNF276Q8N554 614 aa12.58□□□□□ -0.4
GCA-208ENST00000479199 SETD7Q8WTS6 366 aaKnown RBP12.58□□□□□ -0.4
GCA-208ENST00000479199 UCMAQ8WVF2 138 aa12.58□□□□□ -0.4
GCA-208ENST00000479199 PRCCQ92733 491 aaPredicted RBP12.58□□□□□ -0.4
GCA-208ENST00000479199 SIPA1Q96FS4 1042 aa12.58□□□□□ -0.4
GCA-208ENST00000479199 ARID3AQ99856 593 aa12.58□□□□□ -0.4
GCA-208ENST00000479199 CIPCQ9C0C6 399 aa12.58□□□□□ -0.4
GCA-208ENST00000479199 GAREM1Q9H706 876 aa12.58□□□□□ -0.4
GCA-208ENST00000479199 MARCH2Q9P0N8 246 aa12.58□□□□□ -0.4
GCA-208ENST00000479199 TRAF3IP3Q9Y228 551 aa12.58□□□□□ -0.4
GCA-208ENST00000479199 ZNF510Q9Y2H8 683 aa12.58□□□□□ -0.4
GCA-208ENST00000479199 NFE2L3Q9Y4A8 694 aa12.58□□□□□ -0.4
GCA-208ENST00000479199 MYLKQ15746 1914 aa12.58□□□□□ -0.4
GCA-208ENST00000479199 IGSF10Q6WRI0 2623 aa12.57□□□□□ -0.4
GCA-208ENST00000479199 SLC12A8A0AV02 714 aa12.57□□□□□ -0.4
GCA-208ENST00000479199 METTL12A8MUP2 240 aa12.57□□□□□ -0.4
GCA-208ENST00000479199 NPC1O15118 1278 aa12.57□□□□□ -0.4
GCA-208ENST00000479199 MAPK13O15264 365 aa12.57□□□□□ -0.4
GCA-208ENST00000479199 BCAT2O15382 392 aaPredicted RBP12.57□□□□□ -0.4
GCA-208ENST00000479199 CER1O95813 267 aa12.57□□□□□ -0.4
GCA-208ENST00000479199 IGLV3-19P01714 112 aa12.57□□□□□ -0.4
GCA-208ENST00000479199 CYBBP04839 570 aa12.57□□□□□ -0.4
GCA-208ENST00000479199 EPHX1P07099 455 aa12.57□□□□□ -0.4
GCA-208ENST00000479199 HLA-EP13747 358 aa12.57□□□□□ -0.4
GCA-208ENST00000479199 MATKP42679 507 aa12.57□□□□□ -0.4
GCA-208ENST00000479199 YWHAGP61981 247 aaKnown RBP eCLIP12.57□□□□□ -0.4
GCA-208ENST00000479199 COG7P83436 770 aa12.57□□□□□ -0.4
GCA-208ENST00000479199 SERPINA13PQ6UXR4 307 aa12.57□□□□□ -0.4
GCA-208ENST00000479199 INTS8Q75QN2 995 aaKnown RBP12.57□□□□□ -0.4
GCA-208ENST00000479199 RSRC2Q7L4I2 434 aaKnown RBP12.57□□□□□ -0.4
GCA-208ENST00000479199 PIGZQ86VD9 579 aa12.57□□□□□ -0.4
GCA-208ENST00000479199 FAM186BQ8IYM0 893 aa12.57□□□□□ -0.4
GCA-208ENST00000479199 ZNF366Q8N895 744 aa12.57□□□□□ -0.4
GCA-208ENST00000479199 CADM4Q8NFZ8 388 aa12.57□□□□□ -0.4
GCA-208ENST00000479199 DDI1Q8WTU0 396 aa12.57□□□□□ -0.4
GCA-208ENST00000479199 SNX19Q92543 992 aa12.57□□□□□ -0.4
GCA-208ENST00000479199 NDRG1Q92597 394 aaKnown RBP12.57□□□□□ -0.4
GCA-208ENST00000479199 SEMA4DQ92854 862 aa12.57□□□□□ -0.4
GCA-208ENST00000479199 HEXIM2Q96MH2 286 aaKnown RBP12.57□□□□□ -0.4
GCA-208ENST00000479199 CDK5RAP1Q96SZ6 601 aaKnown RBP12.57□□□□□ -0.4
GCA-208ENST00000479199 DCLK3Q9C098 648 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms