RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 TMEM25Q86YD3 366 aa16.13■□□□□ 0.17
C9orf3-217ENST00000479161 SPEM1Q8N4L4 309 aa16.13■□□□□ 0.17
C9orf3-217ENST00000479161 DQX1Q8TE96 717 aaKnown RBP16.13■□□□□ 0.17
C9orf3-217ENST00000479161 NT5C3BQ969T7 300 aa16.13■□□□□ 0.17
C9orf3-217ENST00000479161 SYT11Q9BT88 431 aa16.13■□□□□ 0.17
C9orf3-217ENST00000479161 SYNCQ9H7C4 482 aa16.13■□□□□ 0.17
C9orf3-217ENST00000479161 SFMBT1Q9UHJ3 866 aa16.13■□□□□ 0.17
C9orf3-217ENST00000479161 AGO1Q9UL18 857 aaKnown RBP16.13■□□□□ 0.17
C9orf3-217ENST00000479161 NDRG2Q9UN36 371 aaKnown RBP16.13■□□□□ 0.17
C9orf3-217ENST00000479161 IRAK2O43187 625 aa16.12■□□□□ 0.17
C9orf3-217ENST00000479161 CBFA2T2O43439 604 aa16.12■□□□□ 0.17
C9orf3-217ENST00000479161 ATG13O75143 517 aa16.12■□□□□ 0.17
C9orf3-217ENST00000479161 PENKP01210 267 aaPredicted RBP16.12■□□□□ 0.17
C9orf3-217ENST00000479161 IRF1P10914 325 aa16.12■□□□□ 0.17
C9orf3-217ENST00000479161 SLC2A3P11169 496 aa16.12■□□□□ 0.17
C9orf3-217ENST00000479161 HOXA6P31267 233 aa16.12■□□□□ 0.17
C9orf3-217ENST00000479161 CDK17Q00537 523 aa16.12■□□□□ 0.17
C9orf3-217ENST00000479161 HSF5Q4G112 596 aaPredicted RBP16.12■□□□□ 0.17
C9orf3-217ENST00000479161 MPP7Q5T2T1 576 aa16.12■□□□□ 0.17
C9orf3-217ENST00000479161 TAF3Q5VWG9 929 aa16.12■□□□□ 0.17
C9orf3-217ENST00000479161 SYPL2Q5VXT5 272 aa16.12■□□□□ 0.17
C9orf3-217ENST00000479161 NUDT18Q6ZVK8 323 aa16.12■□□□□ 0.17
C9orf3-217ENST00000479161 FAM183BPQ6ZVS7 135 aa16.12■□□□□ 0.17
C9orf3-217ENST00000479161 PHF13Q86YI8 300 aaPredicted RBP16.12■□□□□ 0.17
C9orf3-217ENST00000479161 TTC16Q8NEE8 873 aa16.12■□□□□ 0.17
C9orf3-217ENST00000479161 TTC8Q8TAM2 541 aa16.12■□□□□ 0.17
C9orf3-217ENST00000479161 PGAP3Q96FM1 320 aaPredicted RBP16.12■□□□□ 0.17
C9orf3-217ENST00000479161 VCPIP1Q96JH7 1222 aa16.12■□□□□ 0.17
C9orf3-217ENST00000479161 XPO6Q96QU8 1125 aaKnown RBP16.12■□□□□ 0.17
C9orf3-217ENST00000479161 PNKPQ96T60 521 aa16.12■□□□□ 0.17
C9orf3-217ENST00000479161 AGPAT1Q99943 283 aa16.12■□□□□ 0.17
C9orf3-217ENST00000479161 DDX50Q9BQ39 737 aaKnown RBP16.12■□□□□ 0.17
C9orf3-217ENST00000479161 FAM126AQ9BYI3 521 aaPredicted RBP16.12■□□□□ 0.17
C9orf3-217ENST00000479161 SLC2A11Q9BYW1 496 aa16.12■□□□□ 0.17
C9orf3-217ENST00000479161 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.12■□□□□ 0.17
C9orf3-217ENST00000479161 TJP2Q9UDY2 1190 aa16.12■□□□□ 0.17
C9orf3-217ENST00000479161 NAALADL1Q9UQQ1 740 aa16.12■□□□□ 0.17
C9orf3-217ENST00000479161 BZW2Q9Y6E2 419 aaKnown RBP16.12■□□□□ 0.17
C9orf3-217ENST00000479161 ATG2BQ96BY7 2078 aa16.12■□□□□ 0.17
C9orf3-217ENST00000479161 DAB1O75553 588 aa16.11■□□□□ 0.17
C9orf3-217ENST00000479161 TRUB2O95900 331 aaKnown RBP16.11■□□□□ 0.17
C9orf3-217ENST00000479161 GBP1P32455 592 aa16.11■□□□□ 0.17
C9orf3-217ENST00000479161 GRIA2P42262 883 aa16.11■□□□□ 0.17
C9orf3-217ENST00000479161 MATKP42679 507 aa16.11■□□□□ 0.17
C9orf3-217ENST00000479161 TNFRSF4P43489 277 aa16.11■□□□□ 0.17
C9orf3-217ENST00000479161 SLC11A2P49281 568 aa16.11■□□□□ 0.17
C9orf3-217ENST00000479161 CCR3P51677 355 aa16.11■□□□□ 0.17
C9orf3-217ENST00000479161 TBX4P57082 545 aa16.11■□□□□ 0.17
C9orf3-217ENST00000479161 TCF15Q12870 199 aa16.11■□□□□ 0.17
C9orf3-217ENST00000479161 PPP2R5DQ14738 602 aa16.11■□□□□ 0.17
C9orf3-217ENST00000479161 ACBD5Q5T8D3 534 aaPredicted RBP16.11■□□□□ 0.17
C9orf3-217ENST00000479161 RNF43Q68DV7 783 aa16.11■□□□□ 0.17
C9orf3-217ENST00000479161 OR6B2Q6IFH4 312 aa16.11■□□□□ 0.17
C9orf3-217ENST00000479161 XYLT1Q86Y38 959 aa16.11■□□□□ 0.17
C9orf3-217ENST00000479161 DENND1CQ8IV53 801 aa16.11■□□□□ 0.17
C9orf3-217ENST00000479161 PHTF2Q8N3S3 785 aa16.11■□□□□ 0.17
C9orf3-217ENST00000479161 PRSS33Q8NF86 280 aa16.11■□□□□ 0.17
C9orf3-217ENST00000479161 SLC20A1Q8WUM9 679 aa16.11■□□□□ 0.17
C9orf3-217ENST00000479161 NELL1Q92832 810 aa16.11■□□□□ 0.17
C9orf3-217ENST00000479161 FBRSL1Q9HCM7 1045 aaKnown RBP16.11■□□□□ 0.17
C9orf3-217ENST00000479161 PRMT8Q9NR22 394 aaPredicted RBP16.11■□□□□ 0.17
C9orf3-217ENST00000479161 IFNKQ9P0W0 207 aa16.11■□□□□ 0.17
C9orf3-217ENST00000479161 DEC1Q9P2X7 70 aa16.11■□□□□ 0.17
C9orf3-217ENST00000479161 CAPN11Q9UMQ6 739 aa16.11■□□□□ 0.17
C9orf3-217ENST00000479161 SLC27A6Q9Y2P4 619 aa16.11■□□□□ 0.17
C9orf3-217ENST00000479161 LRRC53A6NM62 1247 aa16.1■□□□□ 0.17
C9orf3-217ENST00000479161 F9P00740 461 aa16.1■□□□□ 0.17
C9orf3-217ENST00000479161 CYBBP04839 570 aa16.1■□□□□ 0.17
C9orf3-217ENST00000479161 GZMAP12544 262 aa16.1■□□□□ 0.17
C9orf3-217ENST00000479161 MRPS21P82921 87 aaKnown RBP16.1■□□□□ 0.17
C9orf3-217ENST00000479161 ZBED6P86452 979 aa16.1■□□□□ 0.17
C9orf3-217ENST00000479161 C1QBPQ07021 282 aaKnown RBP16.1■□□□□ 0.17
C9orf3-217ENST00000479161 E2F5Q15329 346 aa16.1■□□□□ 0.17
C9orf3-217ENST00000479161 CLEC16AQ2KHT3 1053 aa16.1■□□□□ 0.17
C9orf3-217ENST00000479161 MPPE1Q53F39 396 aa16.1■□□□□ 0.17
C9orf3-217ENST00000479161 DCAF6Q58WW2 860 aa16.1■□□□□ 0.17
C9orf3-217ENST00000479161 SFMBT2Q5VUG0 894 aa16.1■□□□□ 0.17
C9orf3-217ENST00000479161 NAA35Q5VZE5 725 aa16.1■□□□□ 0.17
C9orf3-217ENST00000479161 DEFB106AQ8N104 65 aa16.1■□□□□ 0.17
C9orf3-217ENST00000479161 ZNF557Q8N988 423 aaPredicted RBP16.1■□□□□ 0.17
C9orf3-217ENST00000479161 CPA5Q8WXQ8 436 aa16.1■□□□□ 0.17
C9orf3-217ENST00000479161 PIWIL1Q96J94 861 aaKnown RBP16.1■□□□□ 0.17
C9orf3-217ENST00000479161 FCRL2Q96LA5 508 aaPredicted RBP16.1■□□□□ 0.17
C9orf3-217ENST00000479161 NPY6RQ99463 290 aa16.1■□□□□ 0.17
C9orf3-217ENST00000479161 BBS2Q9BXC9 721 aa16.1■□□□□ 0.17
C9orf3-217ENST00000479161 TMEM59LQ9UK28 342 aa16.1■□□□□ 0.17
C9orf3-217ENST00000479161 STARD13Q9Y3M8 1113 aa16.1■□□□□ 0.17
C9orf3-217ENST00000479161 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.1■□□□□ 0.17
C9orf3-217ENST00000479161 LAMTOR5O43504 91 aa16.09■□□□□ 0.17
C9orf3-217ENST00000479161 ACSL4O60488 711 aa16.09■□□□□ 0.17
C9orf3-217ENST00000479161 TULP3O75386 442 aa16.09■□□□□ 0.17
C9orf3-217ENST00000479161 KAT7O95251 611 aa16.09■□□□□ 0.17
C9orf3-217ENST00000479161 APODP05090 189 aa16.09■□□□□ 0.17
C9orf3-217ENST00000479161 CALB1P05937 261 aa16.09■□□□□ 0.17
C9orf3-217ENST00000479161 TYRP14679 529 aa16.09■□□□□ 0.17
C9orf3-217ENST00000479161 NSFP46459 744 aaKnown RBP16.09■□□□□ 0.17
C9orf3-217ENST00000479161 PTP4A2Q12974 167 aa16.09■□□□□ 0.17
C9orf3-217ENST00000479161 MTAPQ13126 283 aa16.09■□□□□ 0.17
C9orf3-217ENST00000479161 GAS6Q14393 721 aa16.09■□□□□ 0.17
C9orf3-217ENST00000479161 ANGPT1Q15389 498 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms