RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 FAM200BP0CF97 657 aa18.05■□□□□ 0.48
VIM-204ENST00000478746 P4HA1P13674 534 aa18.05■□□□□ 0.48
VIM-204ENST00000478746 PRKCHP24723 683 aa18.05■□□□□ 0.48
VIM-204ENST00000478746 ITPKBP27987 946 aa18.05■□□□□ 0.48
VIM-204ENST00000478746 CASP4P49662 377 aa18.05■□□□□ 0.48
VIM-204ENST00000478746 CCT8P50990 548 aa18.05■□□□□ 0.48
VIM-204ENST00000478746 NDST1P52848 882 aa18.05■□□□□ 0.48
VIM-204ENST00000478746 AP3M2P53677 418 aa18.05■□□□□ 0.48
VIM-204ENST00000478746 ARID5AQ03989 594 aa18.05■□□□□ 0.48
VIM-204ENST00000478746 ANKS1BQ7Z6G8 1248 aa18.05■□□□□ 0.48
VIM-204ENST00000478746 TADA2BQ86TJ2 420 aa18.05■□□□□ 0.48
VIM-204ENST00000478746 JAKMIP2Q96AA8 810 aa18.05■□□□□ 0.48
VIM-204ENST00000478746 CIPCQ9C0C6 399 aa18.05■□□□□ 0.48
VIM-204ENST00000478746 TNMDQ9H2S6 317 aa18.05■□□□□ 0.48
VIM-204ENST00000478746 TM9SF3Q9HD45 589 aa18.05■□□□□ 0.48
VIM-204ENST00000478746 OSGEPQ9NPF4 335 aa18.05■□□□□ 0.48
VIM-204ENST00000478746 NAGPAQ9UK23 515 aa18.05■□□□□ 0.48
VIM-204ENST00000478746 PCDHA5Q9Y5H7 936 aa18.05■□□□□ 0.48
VIM-204ENST00000478746 GTF3C3Q9Y5Q9 886 aa18.05■□□□□ 0.48
VIM-204ENST00000478746 NUMA1Q14980 2115 aa18.05■□□□□ 0.48
VIM-204ENST00000478746 TMEM131Q92545 1883 aa18.04■□□□□ 0.48
VIM-204ENST00000478746 HHLA1C9JL84 531 aa18.04■□□□□ 0.48
VIM-204ENST00000478746 ATXN7O15265 892 aaPredicted RBP18.04■□□□□ 0.48
VIM-204ENST00000478746 TIMM44O43615 452 aa18.04■□□□□ 0.48
VIM-204ENST00000478746 CYBBP04839 570 aa18.04■□□□□ 0.48
VIM-204ENST00000478746 ADORA2BP29275 332 aa18.04■□□□□ 0.48
VIM-204ENST00000478746 ACSL1P33121 698 aa18.04■□□□□ 0.48
VIM-204ENST00000478746 GRIA4P48058 902 aa18.04■□□□□ 0.48
VIM-204ENST00000478746 ASIC1P78348 528 aa18.04■□□□□ 0.48
VIM-204ENST00000478746 COG7P83436 770 aa18.04■□□□□ 0.48
VIM-204ENST00000478746 AMPD3Q01432 767 aa18.04■□□□□ 0.48
VIM-204ENST00000478746 EIF4HQ15056 248 aaKnown RBP18.04■□□□□ 0.48
VIM-204ENST00000478746 FAM26FQ5R3K3 315 aa18.04■□□□□ 0.48
VIM-204ENST00000478746 FAM173BQ6P4H8 233 aa18.04■□□□□ 0.48
VIM-204ENST00000478746 SERPINA13PQ6UXR4 307 aa18.04■□□□□ 0.48
VIM-204ENST00000478746 LRRC69Q6ZNQ3 347 aa18.04■□□□□ 0.48
VIM-204ENST00000478746 UNC93AQ86WB7 457 aa18.04■□□□□ 0.48
VIM-204ENST00000478746 OR2T3Q8NH03 318 aa18.04■□□□□ 0.48
VIM-204ENST00000478746 SORCS1Q8WY21 1168 aa18.04■□□□□ 0.48
VIM-204ENST00000478746 DCLK3Q9C098 648 aa18.04■□□□□ 0.48
VIM-204ENST00000478746 KBTBD4Q9NVX7 518 aa18.04■□□□□ 0.48
VIM-204ENST00000478746 FTSJ1Q9UET6 329 aa18.04■□□□□ 0.48
VIM-204ENST00000478746 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.04■□□□□ 0.48
VIM-204ENST00000478746 CKAP5Q14008 2032 aa18.03■□□□□ 0.48
VIM-204ENST00000478746 H0Y8X5 98 aa18.03■□□□□ 0.48
VIM-204ENST00000478746 EXOC3O60645 756 aa18.03■□□□□ 0.48
VIM-204ENST00000478746 C1QL1O75973 258 aa18.03■□□□□ 0.48
VIM-204ENST00000478746 C4BPAP04003 597 aaKnown RBP18.03■□□□□ 0.48
VIM-204ENST00000478746 HMBSP08397 361 aa18.03■□□□□ 0.48
VIM-204ENST00000478746 RALAP11233 206 aa18.03■□□□□ 0.48
VIM-204ENST00000478746 JUPP14923 745 aa18.03■□□□□ 0.48
VIM-204ENST00000478746 TRIM21P19474 475 aaKnown RBP18.03■□□□□ 0.48
VIM-204ENST00000478746 PSEN1P49768 467 aa18.03■□□□□ 0.48
VIM-204ENST00000478746 SGSM1Q2NKQ1 1148 aa18.03■□□□□ 0.48
VIM-204ENST00000478746 INAVAQ3KP66 663 aa18.03■□□□□ 0.48
VIM-204ENST00000478746 CLEC20AQ6ZU45 233 aa18.03■□□□□ 0.48
VIM-204ENST00000478746 ZNF276Q8N554 614 aa18.03■□□□□ 0.48
VIM-204ENST00000478746 PLEKHO2Q8TD55 490 aa18.03■□□□□ 0.48
VIM-204ENST00000478746 HNRNPABQ99729 332 aaKnown RBP18.03■□□□□ 0.48
VIM-204ENST00000478746 LHX5Q9H2C1 402 aa18.03■□□□□ 0.48
VIM-204ENST00000478746 PRORYQ9H606 182 aa18.03■□□□□ 0.48
VIM-204ENST00000478746 CGNQ9P2M7 1197 aaKnown RBP18.03■□□□□ 0.48
VIM-204ENST00000478746 CLEC4EQ9ULY5 219 aa18.03■□□□□ 0.48
VIM-204ENST00000478746 DFNA5O60443 496 aa18.02■□□□□ 0.48
VIM-204ENST00000478746 VNN1O95497 513 aa18.02■□□□□ 0.48
VIM-204ENST00000478746 CORO1AP31146 461 aaKnown RBP18.02■□□□□ 0.48
VIM-204ENST00000478746 EIF2S3P41091 472 aaKnown RBP18.02■□□□□ 0.48
VIM-204ENST00000478746 CAMK2GQ13555 558 aaPredicted RBP18.02■□□□□ 0.48
VIM-204ENST00000478746 SLC39A14Q15043 492 aa18.02■□□□□ 0.48
VIM-204ENST00000478746 C6orf118Q5T5N4 469 aa18.02■□□□□ 0.48
VIM-204ENST00000478746 TMEM215Q68D42 235 aa18.02■□□□□ 0.48
VIM-204ENST00000478746 ADAT2Q7Z6V5 191 aaKnown RBP18.02■□□□□ 0.48
VIM-204ENST00000478746 SCD5Q86SK9 330 aa18.02■□□□□ 0.48
VIM-204ENST00000478746 C12orf56Q8IXR9 622 aa18.02■□□□□ 0.48
VIM-204ENST00000478746 RBBP8NLQ8NC74 664 aaPredicted RBP18.02■□□□□ 0.48
VIM-204ENST00000478746 PARD3BQ8TEW8 1205 aa18.02■□□□□ 0.48
VIM-204ENST00000478746 DDI1Q8WTU0 396 aa18.02■□□□□ 0.48
VIM-204ENST00000478746 BIRC7Q96CA5 298 aa18.02■□□□□ 0.48
VIM-204ENST00000478746 NXPE2Q96DL1 559 aa18.02■□□□□ 0.48
VIM-204ENST00000478746 CYFIP2Q96F07 1278 aa18.02■□□□□ 0.48
VIM-204ENST00000478746 CDK5RAP1Q96SZ6 601 aaKnown RBP18.02■□□□□ 0.48
VIM-204ENST00000478746 SLC2A11Q9BYW1 496 aa18.02■□□□□ 0.48
VIM-204ENST00000478746 BTBD1Q9H0C5 482 aa18.02■□□□□ 0.48
VIM-204ENST00000478746 PNPLA8Q9NP80 782 aa18.02■□□□□ 0.48
VIM-204ENST00000478746 HMGXB4Q9UGU5 601 aa18.02■□□□□ 0.48
VIM-204ENST00000478746 RASAL2Q9UJF2 1139 aa18.02■□□□□ 0.48
VIM-204ENST00000478746 AGO1Q9UL18 857 aaKnown RBP18.02■□□□□ 0.48
VIM-204ENST00000478746 UBE4BO95155 1302 aa18.01■□□□□ 0.47
VIM-204ENST00000478746 LRRIQ3A6PVS8 624 aaPredicted RBP18.01■□□□□ 0.47
VIM-204ENST00000478746 RRP8O43159 456 aaKnown RBP18.01■□□□□ 0.47
VIM-204ENST00000478746 STX6O43752 255 aa18.01■□□□□ 0.47
VIM-204ENST00000478746 TSPAN3O60637 253 aa18.01■□□□□ 0.47
VIM-204ENST00000478746 FSBPO95073 299 aa18.01■□□□□ 0.47
VIM-204ENST00000478746 SEMA4FO95754 770 aa18.01■□□□□ 0.47
VIM-204ENST00000478746 CD27P26842 260 aa18.01■□□□□ 0.47
VIM-204ENST00000478746 CTSKP43235 329 aa18.01■□□□□ 0.47
VIM-204ENST00000478746 KIF11P52732 1056 aa18.01■□□□□ 0.47
VIM-204ENST00000478746 CLDN10P78369 228 aa18.01■□□□□ 0.47
VIM-204ENST00000478746 IL9RQ01113 521 aa18.01■□□□□ 0.47
VIM-204ENST00000478746 SEMG2Q02383 582 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms