RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 SERPINB11Q96P15 392 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 DDX23Q9BUQ8 820 aaKnown RBP7.19□□□□□ -1.26
BRCA1-215ENST00000478531 EDEM3Q9BZQ6 932 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 DCLK3Q9C098 648 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 SPHK2Q9NRA0 654 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 RBM12Q9NTZ6 932 aaKnown RBP7.19□□□□□ -1.26
BRCA1-215ENST00000478531 DDIT4Q9NX09 232 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 TAS2R14Q9NYV8 317 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 PLK2Q9NYY3 685 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 AIPL1Q9NZN9 384 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 ADAM22Q9P0K1 906 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 AGO1Q9UL18 857 aaKnown RBP7.19□□□□□ -1.26
BRCA1-215ENST00000478531 CAPN11Q9UMQ6 739 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 HBS1LQ9Y450 684 aaKnown RBP7.19□□□□□ -1.26
BRCA1-215ENST00000478531 ATMINO43313 823 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-215ENST00000478531 CALB1P05937 261 aa7.18□□□□□ -1.26
BRCA1-215ENST00000478531 GLI1P08151 1106 aa7.18□□□□□ -1.26
BRCA1-215ENST00000478531 PLEKP08567 350 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-215ENST00000478531 UNGP13051 313 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-215ENST00000478531 MMP8P22894 467 aa7.18□□□□□ -1.26
BRCA1-215ENST00000478531 SULT1E1P49888 294 aa7.18□□□□□ -1.26
BRCA1-215ENST00000478531 CLCN5P51795 746 aa7.18□□□□□ -1.26
BRCA1-215ENST00000478531 CDK17Q00537 523 aa7.18□□□□□ -1.26
BRCA1-215ENST00000478531 AMPD2Q01433 879 aa7.18□□□□□ -1.26
BRCA1-215ENST00000478531 TRIM14Q14142 442 aa7.18□□□□□ -1.26
BRCA1-215ENST00000478531 TRIP4Q15650 581 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-215ENST00000478531 NUGGCQ68CJ6 796 aa7.18□□□□□ -1.26
BRCA1-215ENST00000478531 RHBDF2Q6PJF5 856 aa7.18□□□□□ -1.26
BRCA1-215ENST00000478531 C12orf40Q86WS4 652 aa7.18□□□□□ -1.26
BRCA1-215ENST00000478531 TMEM25Q86YD3 366 aa7.18□□□□□ -1.26
BRCA1-215ENST00000478531 EMC1Q8N766 993 aa7.18□□□□□ -1.26
BRCA1-215ENST00000478531 RNF34Q969K3 372 aa7.18□□□□□ -1.26
BRCA1-215ENST00000478531 SLC2A13Q96QE2 648 aa7.18□□□□□ -1.26
BRCA1-215ENST00000478531 P2RY13Q9BPV8 354 aa7.18□□□□□ -1.26
BRCA1-215ENST00000478531 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.18□□□□□ -1.26
BRCA1-215ENST00000478531 BBS2Q9BXC9 721 aa7.18□□□□□ -1.26
BRCA1-215ENST00000478531 NUCKS1Q9H1E3 243 aaKnown RBP7.18□□□□□ -1.26
BRCA1-215ENST00000478531 ASNSD1Q9NWL6 643 aa7.18□□□□□ -1.26
BRCA1-215ENST00000478531 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.18□□□□□ -1.26
BRCA1-215ENST00000478531 ZNF510Q9Y2H8 683 aa7.18□□□□□ -1.26
BRCA1-215ENST00000478531 M0QYT0 321 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 IRAK2O43187 625 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 TSPAN3O60637 253 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 APOEP02649 317 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 TYRP14679 529 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 TFE3P19532 575 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-215ENST00000478531 AVPR2P30518 371 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 FLT3P36888 993 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 OPRD1P41143 372 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 PRKCIP41743 596 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 MATKP42679 507 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 SLC6A11P48066 632 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 MLLT6P55198 1093 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-215ENST00000478531 ADKP55263 362 aaKnown RBP7.17□□□□□ -1.26
BRCA1-215ENST00000478531 SEC13P55735 322 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 GAD2Q05329 585 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 GRSF1Q12849 480 aaKnown RBP eCLIP7.17□□□□□ -1.26
BRCA1-215ENST00000478531 ZC3H12AQ5D1E8 599 aaKnown RBP7.17□□□□□ -1.26
BRCA1-215ENST00000478531 DNAJC24Q6P3W2 148 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 RFWD3Q6PCD5 774 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 C1orf228Q6PIY5 440 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 SARM1Q6SZW1 724 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 Q6ZS52 159 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 MON1BQ7L1V2 547 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 BEND5Q7L4P6 421 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 PHF13Q86YI8 300 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-215ENST00000478531 UNC45BQ8IWX7 931 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 KIAA1958Q8N8K9 716 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 OLIG1Q8TAK6 271 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 CD101Q93033 1021 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 FCRL2Q96LA5 508 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-215ENST00000478531 CFAP57Q96MR6 1250 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 SYT11Q9BT88 431 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 SELENOOQ9BVL4 669 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 FBRSL1Q9HCM7 1045 aaKnown RBP7.17□□□□□ -1.26
BRCA1-215ENST00000478531 DNAJC17Q9NVM6 304 aaKnown RBP7.17□□□□□ -1.26
BRCA1-215ENST00000478531 STAP1Q9ULZ2 295 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 TLR6Q9Y2C9 796 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 GOLGA6L7A0A1B0GV03 622 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 DDX3XO00571 662 aaKnown RBP eCLIP7.17□□□□□ -1.261e-8■■■□□ 17.6
BRCA1-215ENST00000478531 NCAM2O15394 837 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 MFAP3LO75121 409 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 EGFP01133 1207 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 IGLV3-27P01718 113 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 CYBBP04839 570 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 SERPING1P05155 500 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 GBP1P32455 592 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 NOS2P35228 1153 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 CHKAP35790 457 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 SCNN1AP37088 669 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 SLC11A2P49281 568 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 GALK1P51570 392 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 RING1Q06587 406 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 MESP2Q0VG99 397 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 PTP4A2Q12974 167 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 NNTQ13423 1086 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 LRRC32Q14392 662 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 CDO1Q16878 200 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 GAB4Q2WGN9 574 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 HGSNATQ68CP4 663 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms