RNA–Protein interactions for RNA: ENST00000478196.6

RPS27A-208, Transcript of ribosomal protein S27a, human

TSL 2

Gene RPS27A, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS27A-208	ENST00000478196	RRP36	Q96EU6	259 aa	Known RBP	4.57	□□□□□ -1.68
RPS27A-208	ENST00000478196	PTCD3	Q96EY7	689 aa	Known RBP	4.57	□□□□□ -1.68
RPS27A-208	ENST00000478196	FUBP3	Q96I24	572 aa	Known RBP eCLIP	4.57	□□□□□ -1.68
RPS27A-208	ENST00000478196	PAWR	Q96IZ0	340 aa	Known RBP	4.57	□□□□□ -1.68
RPS27A-208	ENST00000478196	DRC1	Q96MC2	740 aa		4.57	□□□□□ -1.68
RPS27A-208	ENST00000478196	TAAR1	Q96RJ0	339 aa		4.57	□□□□□ -1.68
RPS27A-208	ENST00000478196	TIMP4	Q99727	224 aa		4.57	□□□□□ -1.68
RPS27A-208	ENST00000478196	RBM28	Q9NW13	759 aa	Known RBP	4.57	□□□□□ -1.68
RPS27A-208	ENST00000478196	KCTD5	Q9NXV2	234 aa		4.57	□□□□□ -1.68
RPS27A-208	ENST00000478196	PNMA2	Q9UL42	364 aa		4.57	□□□□□ -1.68
RPS27A-208	ENST00000478196	TMPRSS11E	Q9UL52	423 aa		4.57	□□□□□ -1.68
RPS27A-208	ENST00000478196	MRPL11	Q9Y3B7	192 aa	Known RBP	4.57	□□□□□ -1.68
RPS27A-208	ENST00000478196	WIPF3	A6NGB9	483 aa		4.56	□□□□□ -1.68
RPS27A-208	ENST00000478196	CXorf49	A8MYA2	514 aa	Predicted RBP	4.56	□□□□□ -1.68
RPS27A-208	ENST00000478196	CTAGE5	O15320	804 aa		4.56	□□□□□ -1.68
RPS27A-208	ENST00000478196	DHX16	O60231	1041 aa	Known RBP	4.56	□□□□□ -1.68
RPS27A-208	ENST00000478196	SGPL1	O95470	568 aa		4.56	□□□□□ -1.68
RPS27A-208	ENST00000478196	GJB1	P08034	283 aa		4.56	□□□□□ -1.68
RPS27A-208	ENST00000478196	CELA2A	P08217	269 aa		4.56	□□□□□ -1.68
RPS27A-208	ENST00000478196	EN2	P19622	333 aa	Predicted RBP	4.56	□□□□□ -1.68
RPS27A-208	ENST00000478196	POU3F3	P20264	500 aa	Predicted RBP	4.56	□□□□□ -1.68
RPS27A-208	ENST00000478196	CTSS	P25774	331 aa		4.56	□□□□□ -1.68
RPS27A-208	ENST00000478196	CALML3	P27482	149 aa		4.56	□□□□□ -1.68
RPS27A-208	ENST00000478196	HOXA13	P31271	388 aa	Predicted RBP	4.56	□□□□□ -1.68
RPS27A-208	ENST00000478196	RGS19	P49795	217 aa		4.56	□□□□□ -1.68
RPS27A-208	ENST00000478196	ALDH5A1	P51649	535 aa	Predicted RBP	4.56	□□□□□ -1.68
RPS27A-208	ENST00000478196	SOX10	P56693	466 aa		4.56	□□□□□ -1.68
RPS27A-208	ENST00000478196	KRTAP10-6	P60371	365 aa	Predicted RBP	4.56	□□□□□ -1.68
RPS27A-208	ENST00000478196	STK3	Q13188	491 aa		4.56	□□□□□ -1.68
RPS27A-208	ENST00000478196	RABEP1	Q15276	862 aa		4.56	□□□□□ -1.68
RPS27A-208	ENST00000478196	SRSF7	Q16629	238 aa	Known RBP eCLIP	4.56	□□□□□ -1.68
RPS27A-208	ENST00000478196	PFKFB3	Q16875	520 aa	Predicted RBP	4.56	□□□□□ -1.68
RPS27A-208	ENST00000478196	USP17L6P	Q6QN14	398 aa		4.56	□□□□□ -1.68
RPS27A-208	ENST00000478196	SYNE3	Q6ZMZ3	975 aa		4.56	□□□□□ -1.68
RPS27A-208	ENST00000478196	ARMCX2	Q7L311	632 aa		4.56	□□□□□ -1.68
RPS27A-208	ENST00000478196	LILRB2	Q8N423	598 aa		4.56	□□□□□ -1.68
RPS27A-208	ENST00000478196	SAMD3	Q8N6K7	520 aa		4.56	□□□□□ -1.68
RPS27A-208	ENST00000478196	ZNF610	Q8N9Z0	462 aa		4.56	□□□□□ -1.68
RPS27A-208	ENST00000478196	NSUN7	Q8NE18	718 aa	Known RBP	4.56	□□□□□ -1.68
RPS27A-208	ENST00000478196	IL31RA	Q8NI17	732 aa		4.56	□□□□□ -1.68
RPS27A-208	ENST00000478196	ZNF480	Q8WV37	535 aa		4.56	□□□□□ -1.68
RPS27A-208	ENST00000478196	CHTF18	Q8WVB6	975 aa		4.56	□□□□□ -1.68
RPS27A-208	ENST00000478196	GTF3C6	Q969F1	213 aa		4.56	□□□□□ -1.68
RPS27A-208	ENST00000478196	AIFM3	Q96NN9	605 aa		4.56	□□□□□ -1.68
RPS27A-208	ENST00000478196	ZSWIM1	Q9BR11	485 aa		4.56	□□□□□ -1.68
RPS27A-208	ENST00000478196	RNF26	Q9BY78	433 aa	Predicted RBP	4.56	□□□□□ -1.68
RPS27A-208	ENST00000478196	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	4.56	□□□□□ -1.68	1e-6	■■□□□ 14.2
RPS27A-208	ENST00000478196	PXMP2	Q9NR77	195 aa		4.56	□□□□□ -1.68
RPS27A-208	ENST00000478196	PDGFC	Q9NRA1	345 aa		4.56	□□□□□ -1.68
RPS27A-208	ENST00000478196	NRBP1	Q9UHY1	535 aa		4.56	□□□□□ -1.68
RPS27A-208	ENST00000478196	KCNG1	Q9UIX4	513 aa		4.56	□□□□□ -1.68
RPS27A-208	ENST00000478196	KCNE5	Q9UJ90	142 aa		4.56	□□□□□ -1.68
RPS27A-208	ENST00000478196	EVPL	Q92817	2033 aa		4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	LAMA3	Q16787	3333 aa		4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	STK36	Q9NRP7	1315 aa		4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	LOC102724159	A0A0B4J2E5	919 aa		4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	CCDC196	A0A1B0GTZ2	297 aa		4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	ESYT2	A0FGR8	921 aa		4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	ASB14	A6NK59	587 aa		4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	GCOM1	H8Y6P7	765 aa	Predicted RBP	4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	SEPT4	O43236	478 aa		4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	TGM5	O43548	720 aa		4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	JAK2	O60674	1132 aa		4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	POLR2M	P0CAP2	368 aa		4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	SCG2	P13521	617 aa		4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	GPD1	P21695	349 aa		4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	FGFR4	P22455	802 aa		4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	LSP1	P33241	339 aa		4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	KPNA1	P52294	538 aa	Predicted RBP	4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	UBXN2A	P68543	259 aa		4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	PHC1	P78364	1004 aa		4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	MRPS9	P82933	396 aa	Known RBP	4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	DSG1	Q02413	1049 aa		4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	ACVR2B	Q13705	512 aa		4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	BMS1	Q14692	1282 aa	Known RBP	4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	PGM5	Q15124	567 aa		4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	PWP2	Q15269	919 aa	Known RBP	4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	UBE2S	Q16763	222 aa		4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	CCDC144B	Q3MJ40	725 aa		4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	MFSD14C	Q5VZR4	134 aa		4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	CCSAP	Q6IQ19	270 aa	Predicted RBP	4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	FOXR2	Q6PJQ5	311 aa		4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	NOL8	Q76FK4	1167 aa	Known RBP	4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	HEATR3	Q7Z4Q2	680 aa		4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	LYSMD2	Q8IV50	215 aa		4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	SLC41A1	Q8IVJ1	513 aa		4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	FBXO16	Q8IX29	292 aa	Predicted RBP	4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	DRC7	Q8IY82	874 aa		4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	LNX2	Q8N448	690 aa		4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	PDPR	Q8NCN5	879 aa		4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	NSUN6	Q8TEA1	469 aa	Known RBP	4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	DIS3L	Q8TF46	1054 aa	Known RBP	4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	HASPIN	Q8TF76	798 aa		4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	U2AF1L4	Q8WU68	220 aa	Known RBP	4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	CRYGN	Q8WXF5	182 aa		4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	DEFB118	Q96PH6	123 aa		4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	RMDN3	Q96TC7	470 aa		4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	SLC26A6	Q9BXS9	759 aa		4.55	□□□□□ -1.68
RPS27A-208	ENST00000478196	ZMYND12	Q9H0C1	365 aa		4.55	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms