RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 PRKCBP05771 671 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 TMEM191BP0C7N4 346 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 UBA1P22314 1058 aaKnown RBP5.18□□□□□ -1.58
SF3B6-202ENST00000478050 MMP8P22894 467 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 KLRC2P26717 231 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 POLR2BP30876 1174 aaKnown RBP5.18□□□□□ -1.58
SF3B6-202ENST00000478050 RDXP35241 583 aaKnown RBP5.18□□□□□ -1.58
SF3B6-202ENST00000478050 CHKAP35790 457 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 SSR1P43307 286 aaKnown RBP5.18□□□□□ -1.58
SF3B6-202ENST00000478050 TM4SF4P48230 202 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 STAT5BP51692 787 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 IFI35P80217 286 aaPredicted RBP5.18□□□□□ -1.58
SF3B6-202ENST00000478050 TRPC3Q13507 836 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 PIGHQ14442 188 aaPredicted RBP5.18□□□□□ -1.58
SF3B6-202ENST00000478050 MXD4Q14582 209 aaPredicted RBP5.18□□□□□ -1.58
SF3B6-202ENST00000478050 CNGA2Q16280 664 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 MAPK6Q16659 721 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 SGSM1Q2NKQ1 1148 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 ANKRD20A8PQ5CZ79 823 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 ICE2Q659A1 982 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 CDCA2Q69YH5 1023 aaPredicted RBP5.18□□□□□ -1.58
SF3B6-202ENST00000478050 HIBCHQ6NVY1 386 aaPredicted RBP5.18□□□□□ -1.58
SF3B6-202ENST00000478050 DNAJC24Q6P3W2 148 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 MPZL3Q6UWV2 235 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 METTL7BQ6UX53 244 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 LBX2Q6XYB7 198 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 SEPT14Q6ZU15 432 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 TTLL10Q6ZVT0 673 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 PIGWQ7Z7B1 504 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 EXOC3L1Q86VI1 746 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 C1QL4Q86Z23 238 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 PASD1Q8IV76 773 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 CCDC13Q8IYE1 715 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 LRRC34Q8IZ02 419 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 ZCCHC9Q8N567 271 aaKnown RBP5.18□□□□□ -1.58
SF3B6-202ENST00000478050 NIPA2Q8N8Q9 360 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 OR5B17Q8NGF7 314 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.18□□□□□ -1.58
SF3B6-202ENST00000478050 UHMK1Q8TAS1 419 aaKnown RBP5.18□□□□□ -1.58
SF3B6-202ENST00000478050 DYDC1Q8WWB3 177 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 ZNF606Q8WXB4 792 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 SEPT1Q8WYJ6 367 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 ATG4AQ8WYN0 398 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 KAT2BQ92831 832 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 ARHGEF2Q92974 986 aaKnown RBP5.18□□□□□ -1.58
SF3B6-202ENST00000478050 ELMO3Q96BJ8 720 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 DCPSQ96C86 337 aaKnown RBP5.18□□□□□ -1.58
SF3B6-202ENST00000478050 FAXDC2Q96IV6 333 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 CFAP57Q96MR6 1250 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 TTC25Q96NG3 672 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 SLITRK1Q96PX8 696 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 UHRF1Q96T88 793 aaPredicted RBP5.18□□□□□ -1.58
SF3B6-202ENST00000478050 PCYT2Q99447 389 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 ACO2Q99798 780 aaKnown RBP5.18□□□□□ -1.58
SF3B6-202ENST00000478050 PLCD4Q9BRC7 762 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 HERPUD2Q9BSE4 406 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 DDX23Q9BUQ8 820 aaKnown RBP5.18□□□□□ -1.58
SF3B6-202ENST00000478050 TRIM7Q9C029 511 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 CCDC113Q9H0I3 377 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 PPCSQ9HAB8 311 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 CRIM1Q9NZV1 1036 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 STRIP2Q9ULQ0 834 aa5.18□□□□□ -1.58
SF3B6-202ENST00000478050 DRG1Q9Y295 367 aaKnown RBP5.18□□□□□ -1.58
SF3B6-202ENST00000478050 BAHCC1Q9P281 2608 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 LOC102724159A0A0B4J2E5 919 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 TCRBV5S1A1TA0A578 114 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 TMEM120BA0PK00 339 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 MED7O43513 233 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 LIASO43766 372 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 FAM189A1O60320 539 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 B4GALT4O60513 344 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 MSCO60682 206 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 USP2O75604 605 aaPredicted RBP5.17□□□□□ -1.58
SF3B6-202ENST00000478050 STK10O94804 968 aaKnown RBP5.17□□□□□ -1.58
SF3B6-202ENST00000478050 IL18RAPO95256 599 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 SLC25A27O95847 323 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 TNNC2P02585 160 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 EDN1P05305 212 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 VIMP08670 466 aaKnown RBP5.17□□□□□ -1.58
SF3B6-202ENST00000478050 HARSP12081 509 aaKnown RBP5.17□□□□□ -1.58
SF3B6-202ENST00000478050 CD58P19256 250 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 HNRNPH1P31943 449 aaKnown RBP5.17□□□□□ -1.58
SF3B6-202ENST00000478050 GJC1P36383 396 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 TCF7P36402 384 aaPredicted RBP5.17□□□□□ -1.58
SF3B6-202ENST00000478050 MAGEA4P43358 317 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 SLCO1A2P46721 670 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 SLC26A2P50443 739 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 ST13P50502 369 aaKnown RBP5.17□□□□□ -1.58
SF3B6-202ENST00000478050 VCPP55072 806 aaKnown RBP5.17□□□□□ -1.58
SF3B6-202ENST00000478050 GSCP56915 257 aaPredicted RBP5.17□□□□□ -1.58
SF3B6-202ENST00000478050 FKBP1BP68106 108 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 CNTN2Q02246 1040 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 TFDP1Q14186 410 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 GRM2Q14416 872 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 MORF4L2Q15014 288 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 PWP2Q15269 919 aaKnown RBP5.17□□□□□ -1.58
SF3B6-202ENST00000478050 KYNUQ16719 465 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 HADHQ16836 314 aaKnown RBP5.17□□□□□ -1.58
SF3B6-202ENST00000478050 LONRF1Q17RB8 773 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 KCTD19Q17RG1 926 aaPredicted RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms