RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 ABCC4O15439 1325 aa5.54□□□□□ -1.52
VPS50-214ENST00000477935 ASTN2O75129 1339 aaPredicted RBP5.54□□□□□ -1.52
VPS50-214ENST00000477935 TMEM233B4DJY2 109 aa5.54□□□□□ -1.52
VPS50-214ENST00000477935 ECE2O60344 883 aa5.54□□□□□ -1.52
VPS50-214ENST00000477935 C1QL1O75973 258 aa5.54□□□□□ -1.52
VPS50-214ENST00000477935 NXPH3O95157 252 aa5.54□□□□□ -1.52
VPS50-214ENST00000477935 SGPL1O95470 568 aa5.54□□□□□ -1.52
VPS50-214ENST00000477935 TTLL1O95922 423 aa5.54□□□□□ -1.52
VPS50-214ENST00000477935 ZBED1O96006 694 aa5.54□□□□□ -1.52
VPS50-214ENST00000477935 IGLV2-14P01704 120 aa5.54□□□□□ -1.52
VPS50-214ENST00000477935 HRGP04196 525 aa5.54□□□□□ -1.52
VPS50-214ENST00000477935 LRPAP1P30533 357 aa5.54□□□□□ -1.52
VPS50-214ENST00000477935 SUMO3P55854 103 aaPredicted RBP5.54□□□□□ -1.52
VPS50-214ENST00000477935 SATB1Q01826 763 aa5.54□□□□□ -1.52
VPS50-214ENST00000477935 KRT17Q04695 432 aa5.54□□□□□ -1.52
VPS50-214ENST00000477935 MYO1EQ12965 1108 aa5.54□□□□□ -1.52
VPS50-214ENST00000477935 BMPR2Q13873 1038 aa5.54□□□□□ -1.52
VPS50-214ENST00000477935 E2F2Q14209 437 aa5.54□□□□□ -1.52
VPS50-214ENST00000477935 MTHFSDQ2M296 383 aaKnown RBP5.54□□□□□ -1.52
VPS50-214ENST00000477935 AKNAD1Q5T1N1 836 aa5.54□□□□□ -1.52
VPS50-214ENST00000477935 ZNF618Q5T7W0 954 aa5.54□□□□□ -1.52
VPS50-214ENST00000477935 TSTD2Q5T7W7 516 aa5.54□□□□□ -1.52
VPS50-214ENST00000477935 TEDDM1Q5T9Z0 273 aa5.54□□□□□ -1.52
VPS50-214ENST00000477935 RNF220Q5VTB9 566 aa5.54□□□□□ -1.52
VPS50-214ENST00000477935 MAVSQ7Z434 540 aa5.54□□□□□ -1.52
VPS50-214ENST00000477935 GAS2L3Q86XJ1 694 aa5.54□□□□□ -1.52
VPS50-214ENST00000477935 ATRIPQ8WXE1 791 aa5.54□□□□□ -1.52
VPS50-214ENST00000477935 ATG4AQ8WYN0 398 aa5.54□□□□□ -1.52
VPS50-214ENST00000477935 LRTOMTQ8WZ04 291 aa5.54□□□□□ -1.52
VPS50-214ENST00000477935 GUCD1Q96NT3 240 aa5.54□□□□□ -1.52
VPS50-214ENST00000477935 TIMP4Q99727 224 aa5.54□□□□□ -1.52
VPS50-214ENST00000477935 C1QTNF1Q9BXJ1 281 aa5.54□□□□□ -1.52
VPS50-214ENST00000477935 BHMT2Q9H2M3 363 aa5.54□□□□□ -1.52
VPS50-214ENST00000477935 DBNDD1Q9H9R9 158 aa5.54□□□□□ -1.52
VPS50-214ENST00000477935 ST3GAL5Q9UNP4 418 aa5.54□□□□□ -1.52
VPS50-214ENST00000477935 NCOR1O75376 2440 aa5.54□□□□□ -1.52
VPS50-214ENST00000477935 ABCC12Q96J65 1359 aa5.54□□□□□ -1.52
VPS50-214ENST00000477935 ISM1B1AKI9 464 aa5.53□□□□□ -1.52
VPS50-214ENST00000477935 TLR5O60602 858 aa5.53□□□□□ -1.52
VPS50-214ENST00000477935 CCL5P13501 91 aa5.53□□□□□ -1.52
VPS50-214ENST00000477935 BRAFP15056 766 aa5.53□□□□□ -1.52
VPS50-214ENST00000477935 PCSK6P29122 969 aa5.53□□□□□ -1.52
VPS50-214ENST00000477935 CLCN2P51788 898 aa5.53□□□□□ -1.52
VPS50-214ENST00000477935 GRAPQ13588 217 aa5.53□□□□□ -1.52
VPS50-214ENST00000477935 GALEQ14376 348 aa5.53□□□□□ -1.52
VPS50-214ENST00000477935 POLD3Q15054 466 aaPredicted RBP5.53□□□□□ -1.52
VPS50-214ENST00000477935 KIAA0753Q2KHM9 967 aa5.53□□□□□ -1.52
VPS50-214ENST00000477935 ZIK1Q3SY52 487 aaPredicted RBP5.53□□□□□ -1.52
VPS50-214ENST00000477935 MGAT5BQ3V5L5 792 aa5.53□□□□□ -1.52
VPS50-214ENST00000477935 PLA1AQ53H76 456 aa5.53□□□□□ -1.52
VPS50-214ENST00000477935 PLAC9Q5JTB6 97 aa5.53□□□□□ -1.52
VPS50-214ENST00000477935 SUSD4Q5VX71 490 aa5.53□□□□□ -1.52
VPS50-214ENST00000477935 PPP4R4Q6NUP7 873 aa5.53□□□□□ -1.52
VPS50-214ENST00000477935 DARS2Q6PI48 645 aaKnown RBP5.53□□□□□ -1.52
VPS50-214ENST00000477935 KIF6Q6ZMV9 814 aa5.53□□□□□ -1.52
VPS50-214ENST00000477935 ZNF34Q8IZ26 560 aa5.53□□□□□ -1.52
VPS50-214ENST00000477935 IL17REQ8NFR9 667 aa5.53□□□□□ -1.52
VPS50-214ENST00000477935 MAFAQ8NHW3 353 aaPredicted RBP5.53□□□□□ -1.52
VPS50-214ENST00000477935 GRAPLQ8TC17 118 aaPredicted RBP5.53□□□□□ -1.52
VPS50-214ENST00000477935 U2AF1L4Q8WU68 220 aaKnown RBP5.53□□□□□ -1.52
VPS50-214ENST00000477935 SIN3AQ96ST3 1273 aa5.53□□□□□ -1.52
VPS50-214ENST00000477935 ZNF518BQ9C0D4 1074 aa5.53□□□□□ -1.52
VPS50-214ENST00000477935 LRRC27Q9C0I9 530 aa5.53□□□□□ -1.52
VPS50-214ENST00000477935 MS4A7Q9GZW8 240 aaPredicted RBP5.53□□□□□ -1.52
VPS50-214ENST00000477935 CXorf36Q9H7Y0 433 aa5.53□□□□□ -1.52
VPS50-214ENST00000477935 SACM1LQ9NTJ5 587 aa5.53□□□□□ -1.52
VPS50-214ENST00000477935 MAP3K15Q6ZN16 1313 aa5.52□□□□□ -1.53
VPS50-214ENST00000477935 FAM205AQ6ZU69 1335 aa5.52□□□□□ -1.53
VPS50-214ENST00000477935 GCOM1H8Y6P7 765 aaPredicted RBP5.52□□□□□ -1.53
VPS50-214ENST00000477935 GOLIM4O00461 696 aa5.52□□□□□ -1.53
VPS50-214ENST00000477935 SLC16A3O15427 465 aaKnown RBP5.52□□□□□ -1.53
VPS50-214ENST00000477935 PARNO95453 639 aaKnown RBP5.52□□□□□ -1.53
VPS50-214ENST00000477935 NTSR2O95665 410 aa5.52□□□□□ -1.53
VPS50-214ENST00000477935 ERBB2P04626 1255 aa5.52□□□□□ -1.53
VPS50-214ENST00000477935 CSF1RP07333 972 aa5.52□□□□□ -1.53
VPS50-214ENST00000477935 EBLN1P0CF75 366 aa5.52□□□□□ -1.53
VPS50-214ENST00000477935 MYF5P13349 255 aa5.52□□□□□ -1.53
VPS50-214ENST00000477935 RHCEP18577 417 aa5.52□□□□□ -1.53
VPS50-214ENST00000477935 WT1P19544 449 aaPredicted RBP5.52□□□□□ -1.53
VPS50-214ENST00000477935 ITPKBP27987 946 aa5.52□□□□□ -1.53
VPS50-214ENST00000477935 PEX2P28328 305 aa5.52□□□□□ -1.53
VPS50-214ENST00000477935 LIPAP38571 399 aa5.52□□□□□ -1.53
VPS50-214ENST00000477935 PIP4K2AP48426 406 aaPredicted RBP5.52□□□□□ -1.53
VPS50-214ENST00000477935 CCT8P50990 548 aa5.52□□□□□ -1.53
VPS50-214ENST00000477935 FAM193AP78312 1265 aa5.52□□□□□ -1.53
VPS50-214ENST00000477935 RHDQ02161 417 aa5.52□□□□□ -1.53
VPS50-214ENST00000477935 CNGA2Q16280 664 aa5.52□□□□□ -1.53
VPS50-214ENST00000477935 SUPT20HL1Q3ZLR7 823 aa5.52□□□□□ -1.53
VPS50-214ENST00000477935 SLC44A4Q53GD3 710 aa5.52□□□□□ -1.53
VPS50-214ENST00000477935 DCAF12L1Q5VU92 463 aa5.52□□□□□ -1.53
VPS50-214ENST00000477935 ZNF551Q7Z340 670 aaPredicted RBP5.52□□□□□ -1.53
VPS50-214ENST00000477935 MICU3Q86XE3 530 aa5.52□□□□□ -1.53
VPS50-214ENST00000477935 APOBEC3FQ8IUX4 373 aaKnown RBP5.52□□□□□ -1.53
VPS50-214ENST00000477935 RAET1EQ8TD07 263 aa5.52□□□□□ -1.53
VPS50-214ENST00000477935 NELL1Q92832 810 aa5.52□□□□□ -1.53
VPS50-214ENST00000477935 NMD3Q96D46 503 aaKnown RBP5.52□□□□□ -1.53
VPS50-214ENST00000477935 APIPQ96GX9 242 aa5.52□□□□□ -1.53
VPS50-214ENST00000477935 HAPLN3Q96S86 360 aa5.52□□□□□ -1.53
VPS50-214ENST00000477935 CDX2Q99626 313 aaPredicted RBP5.52□□□□□ -1.53
VPS50-214ENST00000477935 UTP14AQ9BVJ6 771 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms