RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 KIF1BO60333 1816 aa4.87□□□□□ -1.63
UBR3-209ENST00000477461 NPATQ14207 1427 aa4.87□□□□□ -1.63
UBR3-209ENST00000477461 CCDC187A0A096LP49 1063 aa4.86□□□□□ -1.63
UBR3-209ENST00000477461 LY6G6EA0A0G2JKS1 128 aa4.86□□□□□ -1.63
UBR3-209ENST00000477461 CAPN8A6NHC0 703 aa4.86□□□□□ -1.63
UBR3-209ENST00000477461 A6NNZ2 444 aa4.86□□□□□ -1.63
UBR3-209ENST00000477461 PIAS2O75928 621 aa4.86□□□□□ -1.63
UBR3-209ENST00000477461 CCKBRP32239 447 aa4.86□□□□□ -1.63
UBR3-209ENST00000477461 PGDP52209 483 aa4.86□□□□□ -1.63
UBR3-209ENST00000477461 CACNB3P54284 484 aa4.86□□□□□ -1.63
UBR3-209ENST00000477461 SLC14A1Q13336 389 aa4.86□□□□□ -1.63
UBR3-209ENST00000477461 RAPGEF1Q13905 1077 aa4.86□□□□□ -1.63
UBR3-209ENST00000477461 KCNB1Q14721 858 aa4.86□□□□□ -1.63
UBR3-209ENST00000477461 MFSD13AQ14CX5 517 aa4.86□□□□□ -1.63
UBR3-209ENST00000477461 NPY5RQ15761 445 aa4.86□□□□□ -1.63
UBR3-209ENST00000477461 METTL25Q8N6Q8 603 aa4.86□□□□□ -1.63
UBR3-209ENST00000477461 TTC17Q96AE7 1141 aa4.86□□□□□ -1.63
UBR3-209ENST00000477461 VCPIP1Q96JH7 1222 aa4.86□□□□□ -1.63
UBR3-209ENST00000477461 C22orf23Q9BZE7 217 aa4.86□□□□□ -1.63
UBR3-209ENST00000477461 POT1Q9NUX5 634 aa4.86□□□□□ -1.63
UBR3-209ENST00000477461 TNRQ92752 1358 aa4.86□□□□□ -1.63
UBR3-209ENST00000477461 TONSLQ96HA7 1378 aa4.86□□□□□ -1.63
UBR3-209ENST00000477461 ANKRD30BQ9BXX2 1392 aa4.86□□□□□ -1.63
UBR3-209ENST00000477461 ERVK-7P63135 1459 aa4.86□□□□□ -1.63
UBR3-209ENST00000477461 TRPM2O94759 1503 aa4.86□□□□□ -1.63
UBR3-209ENST00000477461 IGKV2D-30A0A075B6S6 120 aa4.85□□□□□ -1.63
UBR3-209ENST00000477461 CD8B2A6NJW9 211 aa4.85□□□□□ -1.63
UBR3-209ENST00000477461 TPP1O14773 563 aa4.85□□□□□ -1.63
UBR3-209ENST00000477461 FYB1O15117 783 aa4.85□□□□□ -1.63
UBR3-209ENST00000477461 TLR2O60603 784 aa4.85□□□□□ -1.63
UBR3-209ENST00000477461 RHCEP18577 417 aa4.85□□□□□ -1.63
UBR3-209ENST00000477461 CCKARP32238 428 aa4.85□□□□□ -1.63
UBR3-209ENST00000477461 MCM5P33992 734 aa4.85□□□□□ -1.63
UBR3-209ENST00000477461 FAM193AP78312 1265 aa4.85□□□□□ -1.63
UBR3-209ENST00000477461 RHDQ02161 417 aa4.85□□□□□ -1.63
UBR3-209ENST00000477461 ID2Q02363 134 aa4.85□□□□□ -1.63
UBR3-209ENST00000477461 GALEQ14376 348 aa4.85□□□□□ -1.63
UBR3-209ENST00000477461 CNN3Q15417 329 aaKnown RBP4.85□□□□□ -1.63
UBR3-209ENST00000477461 C4orf46Q504U0 113 aa4.85□□□□□ -1.63
UBR3-209ENST00000477461 DENND2CQ68D51 928 aa4.85□□□□□ -1.63
UBR3-209ENST00000477461 CRELD2Q6UXH1 353 aaPredicted RBP4.85□□□□□ -1.63
UBR3-209ENST00000477461 CLEC9AQ6UXN8 241 aa4.85□□□□□ -1.63
UBR3-209ENST00000477461 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.85□□□□□ -1.63
UBR3-209ENST00000477461 SIN3AQ96ST3 1273 aa4.85□□□□□ -1.63
UBR3-209ENST00000477461 SLC52A1Q9NWF4 448 aa4.85□□□□□ -1.63
UBR3-209ENST00000477461 RGS17Q9UGC6 210 aaPredicted RBP4.85□□□□□ -1.63
UBR3-209ENST00000477461 DDX20Q9UHI6 824 aaKnown RBP4.85□□□□□ -1.63
UBR3-209ENST00000477461 PAXBP1Q9Y5B6 917 aa4.85□□□□□ -1.63
UBR3-209ENST00000477461 FRMPD2Q68DX3 1309 aaPredicted RBP4.85□□□□□ -1.63
UBR3-209ENST00000477461 PTPRTO14522 1441 aa4.85□□□□□ -1.63
UBR3-209ENST00000477461 NOS1P29475 1434 aa4.85□□□□□ -1.63
UBR3-209ENST00000477461 SPATA31D1Q6ZQQ2 1576 aa4.85□□□□□ -1.63
UBR3-209ENST00000477461 CLTCL1P53675 1640 aa4.84□□□□□ -1.63
UBR3-209ENST00000477461 SYNMO15061 1565 aa4.84□□□□□ -1.63
UBR3-209ENST00000477461 PTPRMP28827 1452 aa4.84□□□□□ -1.63
UBR3-209ENST00000477461 ZMYM2Q9UBW7 1377 aa4.84□□□□□ -1.63
UBR3-209ENST00000477461 TRIM43BA6NCK2 446 aa4.84□□□□□ -1.63
UBR3-209ENST00000477461 ISM1B1AKI9 464 aa4.84□□□□□ -1.63
UBR3-209ENST00000477461 GOLIM4O00461 696 aa4.84□□□□□ -1.63
UBR3-209ENST00000477461 TMPRSS11DO60235 418 aa4.84□□□□□ -1.63
UBR3-209ENST00000477461 CRYABP02511 175 aaKnown RBP4.84□□□□□ -1.63
UBR3-209ENST00000477461 ALPLP05186 524 aa4.84□□□□□ -1.63
UBR3-209ENST00000477461 PARP1P09874 1014 aaKnown RBP4.84□□□□□ -1.63
UBR3-209ENST00000477461 PSG1P11464 419 aa4.84□□□□□ -1.63
UBR3-209ENST00000477461 RPL17P18621 184 aaKnown RBP4.84□□□□□ -1.63
UBR3-209ENST00000477461 RPS16P62249 146 aaKnown RBP4.84□□□□□ -1.63
UBR3-209ENST00000477461 TIAL1Q01085 375 aaKnown RBP eCLIP4.84□□□□□ -1.63
UBR3-209ENST00000477461 STIM1Q13586 685 aa4.84□□□□□ -1.63
UBR3-209ENST00000477461 ARHGEF7Q14155 803 aa4.84□□□□□ -1.63
UBR3-209ENST00000477461 SLC29A2Q14542 456 aa4.84□□□□□ -1.63
UBR3-209ENST00000477461 KCNAB1Q14722 419 aa4.84□□□□□ -1.63
UBR3-209ENST00000477461 ZNF750Q32MQ0 723 aa4.84□□□□□ -1.63
UBR3-209ENST00000477461 LEXMQ3ZCV2 418 aa4.84□□□□□ -1.63
UBR3-209ENST00000477461 APOA5Q6Q788 366 aa4.84□□□□□ -1.63
UBR3-209ENST00000477461 VSTM1Q6UX27 236 aa4.84□□□□□ -1.63
UBR3-209ENST00000477461 ANKRD13BQ86YJ7 626 aa4.84□□□□□ -1.63
UBR3-209ENST00000477461 LINC01465Q8N7H1 131 aa4.84□□□□□ -1.63
UBR3-209ENST00000477461 C12orf76Q8N812 135 aaPredicted RBP4.84□□□□□ -1.63
UBR3-209ENST00000477461 TRIM43Q96BQ3 446 aaPredicted RBP4.84□□□□□ -1.63
UBR3-209ENST00000477461 SUCLG2Q96I99 432 aa4.84□□□□□ -1.63
UBR3-209ENST00000477461 CCDC136Q96JN2 1154 aa4.84□□□□□ -1.63
UBR3-209ENST00000477461 SCNM1Q9BWG6 230 aa4.84□□□□□ -1.63
UBR3-209ENST00000477461 NKX1-2Q9UD57 310 aaPredicted RBP4.84□□□□□ -1.63
UBR3-209ENST00000477461 ITGB1BP2Q9UKP3 347 aa4.84□□□□□ -1.63
UBR3-209ENST00000477461 TPCN1Q9ULQ1 816 aa4.84□□□□□ -1.63
UBR3-209ENST00000477461 UGGT1Q9NYU2 1555 aa4.83□□□□□ -1.64
UBR3-209ENST00000477461 PLA2R1Q13018 1463 aa4.83□□□□□ -1.64
UBR3-209ENST00000477461 NLRP1Q9C000 1473 aa4.83□□□□□ -1.64
UBR3-209ENST00000477461 CNTNAP2Q9UHC6 1331 aa4.83□□□□□ -1.64
UBR3-209ENST00000477461 CA12O43570 354 aa4.83□□□□□ -1.64
UBR3-209ENST00000477461 CTSAP10619 480 aa4.83□□□□□ -1.64
UBR3-209ENST00000477461 CPA2P48052 419 aa4.83□□□□□ -1.64
UBR3-209ENST00000477461 ME1P48163 572 aa4.83□□□□□ -1.64
UBR3-209ENST00000477461 CFHR3Q02985 330 aa4.83□□□□□ -1.64
UBR3-209ENST00000477461 POLD3Q15054 466 aaPredicted RBP4.83□□□□□ -1.64
UBR3-209ENST00000477461 RNF220Q5VTB9 566 aa4.83□□□□□ -1.64
UBR3-209ENST00000477461 DARS2Q6PI48 645 aaKnown RBP4.83□□□□□ -1.64
UBR3-209ENST00000477461 COLCA1Q6ZS62 124 aa4.83□□□□□ -1.64
UBR3-209ENST00000477461 PIP4P1Q86T03 277 aa4.83□□□□□ -1.64
UBR3-209ENST00000477461 FAM156AQ8NDB6 213 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms