RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 SP100P23497 879 aaPredicted RBP17.58■□□□□ 0.41
EPHB4-204ENST00000477446 RRM1P23921 792 aa17.58■□□□□ 0.41
EPHB4-204ENST00000477446 SCNN1AP37088 669 aa17.58■□□□□ 0.41
EPHB4-204ENST00000477446 TUBP50607 506 aa17.58■□□□□ 0.41
EPHB4-204ENST00000477446 GSCP56915 257 aaPredicted RBP17.58■□□□□ 0.41
EPHB4-204ENST00000477446 FAM102AQ5T9C2 384 aaPredicted RBP17.58■□□□□ 0.41
EPHB4-204ENST00000477446 SLC26A9Q7LBE3 791 aa17.58■□□□□ 0.41
EPHB4-204ENST00000477446 ZNF276Q8N554 614 aa17.58■□□□□ 0.41
EPHB4-204ENST00000477446 ARL14EPQ8N8R7 260 aaPredicted RBP17.58■□□□□ 0.41
EPHB4-204ENST00000477446 CARD9Q9H257 536 aa17.58■□□□□ 0.41
EPHB4-204ENST00000477446 POPDC2Q9HBU9 364 aa17.58■□□□□ 0.41
EPHB4-204ENST00000477446 ASNSD1Q9NWL6 643 aa17.58■□□□□ 0.41
EPHB4-204ENST00000477446 GDE1Q9NZC3 331 aa17.58■□□□□ 0.41
EPHB4-204ENST00000477446 UVRAGQ9P2Y5 699 aa17.58■□□□□ 0.41
EPHB4-204ENST00000477446 TCRBV5S1A1TA0A578 114 aa17.57■□□□□ 0.4
EPHB4-204ENST00000477446 SOBPA7XYQ1 873 aa17.57■□□□□ 0.4
EPHB4-204ENST00000477446 COCHO43405 550 aa17.57■□□□□ 0.4
EPHB4-204ENST00000477446 CEP104O60308 925 aa17.57■□□□□ 0.4
EPHB4-204ENST00000477446 HSF2BPO75031 334 aa17.57■□□□□ 0.4
EPHB4-204ENST00000477446 OLFM2O95897 454 aa17.57■□□□□ 0.4
EPHB4-204ENST00000477446 TBX18O95935 607 aa17.57■□□□□ 0.4
EPHB4-204ENST00000477446 GLI1P08151 1106 aa17.57■□□□□ 0.4
EPHB4-204ENST00000477446 HDCP19113 662 aa17.57■□□□□ 0.4
EPHB4-204ENST00000477446 OTOP3Q7RTS5 596 aa17.57■□□□□ 0.4
EPHB4-204ENST00000477446 CMTM8Q8IZV2 173 aa17.57■□□□□ 0.4
EPHB4-204ENST00000477446 C3orf20Q8ND61 904 aa17.57■□□□□ 0.4
EPHB4-204ENST00000477446 ATXN2LQ8WWM7 1075 aaKnown RBP17.57■□□□□ 0.4
EPHB4-204ENST00000477446 TRIM11Q96F44 468 aa17.57■□□□□ 0.4
EPHB4-204ENST00000477446 OSGEPQ9NPF4 335 aa17.57■□□□□ 0.4
EPHB4-204ENST00000477446 CTTNBP2NLQ9P2B4 639 aa17.57■□□□□ 0.4
EPHB4-204ENST00000477446 ZMYM5Q9UJ78 669 aa17.57■□□□□ 0.4
EPHB4-204ENST00000477446 PACSIN2Q9UNF0 486 aaPredicted RBP17.57■□□□□ 0.4
EPHB4-204ENST00000477446 NAALADL1Q9UQQ1 740 aa17.57■□□□□ 0.4
EPHB4-204ENST00000477446 USTQ9Y2C2 406 aa17.57■□□□□ 0.4
EPHB4-204ENST00000477446 TRAV19A0A0A6YYK7 116 aa17.57■□□□□ 0.4
EPHB4-204ENST00000477446 ATMINO43313 823 aaPredicted RBP17.57■□□□□ 0.4
EPHB4-204ENST00000477446 CYP1A2P05177 515 aa17.57■□□□□ 0.4
EPHB4-204ENST00000477446 LAMP2P13473 410 aa17.57■□□□□ 0.4
EPHB4-204ENST00000477446 NCAM1P13591 858 aa17.57■□□□□ 0.4
EPHB4-204ENST00000477446 PFKLP17858 780 aa17.57■□□□□ 0.4
EPHB4-204ENST00000477446 RNASE9P60153 205 aaKnown RBP17.57■□□□□ 0.4
EPHB4-204ENST00000477446 NNTQ13423 1086 aa17.57■□□□□ 0.4
EPHB4-204ENST00000477446 C10orf120Q5SQS8 335 aa17.57■□□□□ 0.4
EPHB4-204ENST00000477446 EMBQ6PCB8 327 aa17.57■□□□□ 0.4
EPHB4-204ENST00000477446 BEND5Q7L4P6 421 aa17.57■□□□□ 0.4
EPHB4-204ENST00000477446 ZSCAN18Q8TBC5 510 aaPredicted RBP17.57■□□□□ 0.4
EPHB4-204ENST00000477446 ZNF653Q96CK0 615 aa17.57■□□□□ 0.4
EPHB4-204ENST00000477446 ARHGEF26Q96DR7 871 aa17.57■□□□□ 0.4
EPHB4-204ENST00000477446 METTL5Q9NRN9 209 aaKnown RBP17.57■□□□□ 0.4
EPHB4-204ENST00000477446 ZFP37Q9Y6Q3 630 aaPredicted RBP17.57■□□□□ 0.4
EPHB4-204ENST00000477446 NUP210Q8TEM1 1887 aaPredicted RBP17.57■□□□□ 0.4
EPHB4-204ENST00000477446 CAPN9O14815 690 aa17.56■□□□□ 0.4
EPHB4-204ENST00000477446 GJB6O95452 261 aa17.56■□□□□ 0.4
EPHB4-204ENST00000477446 CKMP06732 381 aa17.56■□□□□ 0.4
EPHB4-204ENST00000477446 MYBL1P10243 752 aa17.56■□□□□ 0.4
EPHB4-204ENST00000477446 ATP5C1P36542 298 aaKnown RBP17.56■□□□□ 0.4
EPHB4-204ENST00000477446 AVPR1AP37288 418 aa17.56■□□□□ 0.4
EPHB4-204ENST00000477446 FAM78AQ5JUQ0 283 aa17.56■□□□□ 0.4
EPHB4-204ENST00000477446 SYPL2Q5VXT5 272 aa17.56■□□□□ 0.4
EPHB4-204ENST00000477446 KLHDC10Q6PID8 442 aa17.56■□□□□ 0.4
EPHB4-204ENST00000477446 TADA2BQ86TJ2 420 aa17.56■□□□□ 0.4
EPHB4-204ENST00000477446 ARID3BQ8IVW6 561 aaPredicted RBP17.56■□□□□ 0.4
EPHB4-204ENST00000477446 DEFB106AQ8N104 65 aa17.56■□□□□ 0.4
EPHB4-204ENST00000477446 UBL4BQ8N7F7 174 aa17.56■□□□□ 0.4
EPHB4-204ENST00000477446 AENQ8WTP8 325 aaKnown RBP17.56■□□□□ 0.4
EPHB4-204ENST00000477446 RNF139Q8WU17 664 aa17.56■□□□□ 0.4
EPHB4-204ENST00000477446 ACSF2Q96CM8 615 aaPredicted RBP17.56■□□□□ 0.4
EPHB4-204ENST00000477446 SLC2A13Q96QE2 648 aa17.56■□□□□ 0.4
EPHB4-204ENST00000477446 CDK5RAP1Q96SZ6 601 aaKnown RBP17.56■□□□□ 0.4
EPHB4-204ENST00000477446 TRIM62Q9BVG3 475 aa17.56■□□□□ 0.4
EPHB4-204ENST00000477446 SMG9Q9H0W8 520 aaKnown RBP17.56■□□□□ 0.4
EPHB4-204ENST00000477446 MED4Q9NPJ6 270 aa17.56■□□□□ 0.4
EPHB4-204ENST00000477446 GDF3Q9NR23 364 aa17.56■□□□□ 0.4
EPHB4-204ENST00000477446 CNOT8Q9UFF9 292 aaKnown RBP17.56■□□□□ 0.4
EPHB4-204ENST00000477446 DMGDHQ9UI17 866 aaKnown RBP17.56■□□□□ 0.4
EPHB4-204ENST00000477446 HELZP42694 1942 aaKnown RBP17.55■□□□□ 0.4
EPHB4-204ENST00000477446 SIGLEC16A6NMB1 481 aa17.55■□□□□ 0.4
EPHB4-204ENST00000477446 C2CD4DB7Z1M9 353 aa17.55■□□□□ 0.4
EPHB4-204ENST00000477446 MDM4O15151 490 aa17.55■□□□□ 0.4
EPHB4-204ENST00000477446 DAB1O75553 588 aa17.55■□□□□ 0.4
EPHB4-204ENST00000477446 KRT3P12035 628 aa17.55■□□□□ 0.4
EPHB4-204ENST00000477446 WEE1P30291 646 aa17.55■□□□□ 0.4
EPHB4-204ENST00000477446 DNA2P51530 1060 aa17.55■□□□□ 0.4
EPHB4-204ENST00000477446 MAMLD1Q13495 774 aa17.55■□□□□ 0.4
EPHB4-204ENST00000477446 HSP90B2PQ58FF3 399 aa17.55■□□□□ 0.4
EPHB4-204ENST00000477446 DCAF6Q58WW2 860 aa17.55■□□□□ 0.4
EPHB4-204ENST00000477446 PLEKHA7Q6IQ23 1121 aa17.55■□□□□ 0.4
EPHB4-204ENST00000477446 DNAJC24Q6P3W2 148 aa17.55■□□□□ 0.4
EPHB4-204ENST00000477446 JOSD2Q8TAC2 188 aa17.55■□□□□ 0.4
EPHB4-204ENST00000477446 ASB16Q96NS5 453 aa17.55■□□□□ 0.4
EPHB4-204ENST00000477446 ASB2Q96Q27 587 aa17.55■□□□□ 0.4
EPHB4-204ENST00000477446 NACA2Q9H009 215 aa17.55■□□□□ 0.4
EPHB4-204ENST00000477446 OLA1Q9NTK5 396 aaKnown RBP17.55■□□□□ 0.4
EPHB4-204ENST00000477446 EPS15L1Q9UBC2 864 aa17.55■□□□□ 0.4
EPHB4-204ENST00000477446 DNMT3LQ9UJW3 386 aa17.55■□□□□ 0.4
EPHB4-204ENST00000477446 NR2E1Q9Y466 385 aa17.55■□□□□ 0.4
EPHB4-204ENST00000477446 ALG6Q9Y672 507 aa17.55■□□□□ 0.4
EPHB4-204ENST00000477446 UNC80Q8N2C7 3258 aa17.55■□□□□ 0.4
EPHB4-204ENST00000477446 DDX3YO15523 660 aaKnown RBP17.54■□□□□ 0.4
EPHB4-204ENST00000477446 PRAMEF12O95522 483 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms