RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 CSNK1G1Q9HCP0 422 aa10.3□□□□□ -0.76
COL4A5-204ENST00000477429 DMAP1Q9NPF5 467 aaPredicted RBP10.3□□□□□ -0.76
COL4A5-204ENST00000477429 AGPAT3Q9NRZ7 376 aa10.3□□□□□ -0.76
COL4A5-204ENST00000477429 FAM49BQ9NUQ9 324 aa10.3□□□□□ -0.76
COL4A5-204ENST00000477429 EHD2Q9NZN4 543 aa10.3□□□□□ -0.76
COL4A5-204ENST00000477429 THAP10Q9P2Z0 257 aaPredicted RBP10.3□□□□□ -0.76
COL4A5-204ENST00000477429 SRPRBQ9Y5M8 271 aaKnown RBP10.3□□□□□ -0.76
COL4A5-204ENST00000477429 DNHD1Q96M86 4753 aa10.29□□□□□ -0.76
COL4A5-204ENST00000477429 GFRA2O00451 464 aa10.29□□□□□ -0.76
COL4A5-204ENST00000477429 PENKP01210 267 aaPredicted RBP10.29□□□□□ -0.76
COL4A5-204ENST00000477429 IGLV3-19P01714 112 aa10.29□□□□□ -0.76
COL4A5-204ENST00000477429 ZNF883P0CG24 379 aa10.29□□□□□ -0.76
COL4A5-204ENST00000477429 TNNI1P19237 187 aa10.29□□□□□ -0.76
COL4A5-204ENST00000477429 ADORA2BP29275 332 aa10.29□□□□□ -0.76
COL4A5-204ENST00000477429 EIF2S3P41091 472 aaKnown RBP10.29□□□□□ -0.76
COL4A5-204ENST00000477429 TNNC1P63316 161 aa10.29□□□□□ -0.76
COL4A5-204ENST00000477429 DLG4P78352 724 aa10.29□□□□□ -0.76
COL4A5-204ENST00000477429 SPOPLQ6IQ16 392 aa10.29□□□□□ -0.76
COL4A5-204ENST00000477429 SDE2Q6IQ49 451 aa10.29□□□□□ -0.76
COL4A5-204ENST00000477429 SCUBE3Q8IX30 993 aa10.29□□□□□ -0.76
COL4A5-204ENST00000477429 NELFCDQ8IXH7 590 aa10.29□□□□□ -0.76
COL4A5-204ENST00000477429 PDILTQ8N807 584 aa10.29□□□□□ -0.76
COL4A5-204ENST00000477429 CADM4Q8NFZ8 388 aa10.29□□□□□ -0.76
COL4A5-204ENST00000477429 XPO6Q96QU8 1125 aaKnown RBP10.29□□□□□ -0.76
COL4A5-204ENST00000477429 ZDHHC5Q9C0B5 715 aa10.29□□□□□ -0.76
COL4A5-204ENST00000477429 KDM4CQ9H3R0 1056 aa10.29□□□□□ -0.76
COL4A5-204ENST00000477429 PRORYQ9H606 182 aa10.29□□□□□ -0.76
COL4A5-204ENST00000477429 CYLDQ9NQC7 956 aa10.29□□□□□ -0.76
COL4A5-204ENST00000477429 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.29□□□□□ -0.76
COL4A5-204ENST00000477429 MUC22E2RYF6 1773 aaPredicted RBP10.29□□□□□ -0.76
COL4A5-204ENST00000477429 COL5A1P20908 1838 aaPredicted RBP10.28□□□□□ -0.76
COL4A5-204ENST00000477429 LRRIQ3A6PVS8 624 aaPredicted RBP10.28□□□□□ -0.76
COL4A5-204ENST00000477429 WNT9AO14904 365 aa10.28□□□□□ -0.76
COL4A5-204ENST00000477429 STAU1O95793 577 aaKnown RBP10.28□□□□□ -0.76
COL4A5-204ENST00000477429 HMBSP08397 361 aa10.28□□□□□ -0.76
COL4A5-204ENST00000477429 FAM163BP0C2L3 166 aa10.28□□□□□ -0.76
COL4A5-204ENST00000477429 RARGP13631 454 aa10.28□□□□□ -0.76
COL4A5-204ENST00000477429 ALCAMQ13740 583 aa10.28□□□□□ -0.76
COL4A5-204ENST00000477429 SHBQ15464 509 aa10.28□□□□□ -0.76
COL4A5-204ENST00000477429 CLEC20AQ6ZU45 233 aa10.28□□□□□ -0.76
COL4A5-204ENST00000477429 GATAD2AQ86YP4 633 aa10.28□□□□□ -0.76
COL4A5-204ENST00000477429 ZNF507Q8TCN5 953 aa10.28□□□□□ -0.76
COL4A5-204ENST00000477429 SIPA1Q96FS4 1042 aa10.28□□□□□ -0.76
COL4A5-204ENST00000477429 SMARCD1Q96GM5 515 aa10.28□□□□□ -0.76
COL4A5-204ENST00000477429 NACA2Q9H009 215 aa10.28□□□□□ -0.76
COL4A5-204ENST00000477429 MTG2Q9H4K7 406 aa10.28□□□□□ -0.76
COL4A5-204ENST00000477429 CAAP1Q9H8G2 361 aa10.28□□□□□ -0.76
COL4A5-204ENST00000477429 EBF2Q9HAK2 575 aa10.28□□□□□ -0.76
COL4A5-204ENST00000477429 TM9SF3Q9HD45 589 aa10.28□□□□□ -0.76
COL4A5-204ENST00000477429 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.28□□□□□ -0.76
COL4A5-204ENST00000477429 WDR35Q9P2L0 1181 aa10.28□□□□□ -0.76
COL4A5-204ENST00000477429 ANKRD6Q9Y2G4 727 aa10.28□□□□□ -0.76
COL4A5-204ENST00000477429 SLC27A6Q9Y2P4 619 aa10.28□□□□□ -0.76
COL4A5-204ENST00000477429 NFE2L3Q9Y4A8 694 aa10.28□□□□□ -0.76
COL4A5-204ENST00000477429 PCDHGB2Q9Y5G2 931 aa10.28□□□□□ -0.76
COL4A5-204ENST00000477429 LRRK2Q5S007 2527 aa10.28□□□□□ -0.76
COL4A5-204ENST00000477429 ITPR2Q14571 2701 aa10.27□□□□□ -0.77
COL4A5-204ENST00000477429 ENO4A6NNW6 628 aa10.27□□□□□ -0.77
COL4A5-204ENST00000477429 GPR37O15354 613 aa10.27□□□□□ -0.77
COL4A5-204ENST00000477429 FLRT2O43155 660 aa10.27□□□□□ -0.77
COL4A5-204ENST00000477429 WISP1O95388 367 aa10.27□□□□□ -0.77
COL4A5-204ENST00000477429 CER1O95813 267 aa10.27□□□□□ -0.77
COL4A5-204ENST00000477429 BMP15O95972 392 aa10.27□□□□□ -0.77
COL4A5-204ENST00000477429 C4BPAP04003 597 aaKnown RBP10.27□□□□□ -0.77
COL4A5-204ENST00000477429 WNT1P04628 370 aa10.27□□□□□ -0.77
COL4A5-204ENST00000477429 ATP5C1P36542 298 aaKnown RBP10.27□□□□□ -0.77
COL4A5-204ENST00000477429 STAT6P42226 847 aa10.27□□□□□ -0.77
COL4A5-204ENST00000477429 NDST1P52848 882 aa10.27□□□□□ -0.77
COL4A5-204ENST00000477429 DNAJC3Q13217 504 aa10.27□□□□□ -0.77
COL4A5-204ENST00000477429 SURF1Q15526 300 aa10.27□□□□□ -0.77
COL4A5-204ENST00000477429 PPP1R15BQ5SWA1 713 aa10.27□□□□□ -0.77
COL4A5-204ENST00000477429 C1orf220Q5T0J3 134 aa10.27□□□□□ -0.77
COL4A5-204ENST00000477429 BRAPQ7Z569 592 aa10.27□□□□□ -0.77
COL4A5-204ENST00000477429 SNX19Q92543 992 aa10.27□□□□□ -0.77
COL4A5-204ENST00000477429 BIRC7Q96CA5 298 aa10.27□□□□□ -0.77
COL4A5-204ENST00000477429 USP28Q96RU2 1077 aa10.27□□□□□ -0.77
COL4A5-204ENST00000477429 VRTNQ9H8Y1 702 aa10.27□□□□□ -0.77
COL4A5-204ENST00000477429 CCDC39Q9UFE4 941 aa10.27□□□□□ -0.77
COL4A5-204ENST00000477429 AGO1Q9UL18 857 aaKnown RBP10.27□□□□□ -0.77
COL4A5-204ENST00000477429 SMC3Q9UQE7 1217 aa10.27□□□□□ -0.77
COL4A5-204ENST00000477429 SCML2Q9UQR0 700 aa10.27□□□□□ -0.77
COL4A5-204ENST00000477429 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.27□□□□□ -0.77
COL4A5-204ENST00000477429 R3HCC1Q9Y3T6 440 aaKnown RBP10.27□□□□□ -0.77
COL4A5-204ENST00000477429 CKAP5Q14008 2032 aa10.27□□□□□ -0.77
COL4A5-204ENST00000477429 KNTC1P50748 2209 aa10.26□□□□□ -0.77
COL4A5-204ENST00000477429 VPS37CA5D8V6 355 aaPredicted RBP10.26□□□□□ -0.77
COL4A5-204ENST00000477429 KIAA0391O15091 583 aaKnown RBP10.26□□□□□ -0.77
COL4A5-204ENST00000477429 ZBTB24O43167 697 aaPredicted RBP10.26□□□□□ -0.77
COL4A5-204ENST00000477429 TNFSF14O43557 240 aa10.26□□□□□ -0.77
COL4A5-204ENST00000477429 IGHV4-34P06331 123 aa10.26□□□□□ -0.77
COL4A5-204ENST00000477429 CTSKP43235 329 aa10.26□□□□□ -0.77
COL4A5-204ENST00000477429 ASPAP45381 313 aa10.26□□□□□ -0.77
COL4A5-204ENST00000477429 ABCG1P45844 678 aa10.26□□□□□ -0.77
COL4A5-204ENST00000477429 SGSHP51688 502 aa10.26□□□□□ -0.77
COL4A5-204ENST00000477429 EHHADHQ08426 723 aa10.26□□□□□ -0.77
COL4A5-204ENST00000477429 TRPC3Q13507 836 aa10.26□□□□□ -0.77
COL4A5-204ENST00000477429 ZNF699Q32M78 642 aa10.26□□□□□ -0.77
COL4A5-204ENST00000477429 PREPLQ4J6C6 727 aaPredicted RBP10.26□□□□□ -0.77
COL4A5-204ENST00000477429 C10orf120Q5SQS8 335 aa10.26□□□□□ -0.77
COL4A5-204ENST00000477429 CRYBG2Q8N1P7 616 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms