RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 HCRTO43612 131 aa11.36□□□□□ -0.59
COL27A1-204ENST00000477421 TSPAN3O60637 253 aa11.36□□□□□ -0.59
COL27A1-204ENST00000477421 SERPINB5P36952 375 aa11.36□□□□□ -0.59
COL27A1-204ENST00000477421 AP2B1P63010 937 aa11.36□□□□□ -0.59
COL27A1-204ENST00000477421 TSHZ1Q6ZSZ6 1077 aa11.36□□□□□ -0.59
COL27A1-204ENST00000477421 IFNEQ86WN2 208 aa11.36□□□□□ -0.59
COL27A1-204ENST00000477421 DDIASQ8IXT1 998 aa11.36□□□□□ -0.59
COL27A1-204ENST00000477421 PYROXD2Q8N2H3 581 aa11.36□□□□□ -0.59
COL27A1-204ENST00000477421 HERPUD2Q9BSE4 406 aa11.36□□□□□ -0.59
COL27A1-204ENST00000477421 PACSIN3Q9UKS6 424 aa11.36□□□□□ -0.59
COL27A1-204ENST00000477421 MEI4A8MW99 385 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 CILPO75339 1184 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 ENTPD5O75356 428 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 KRT16P08779 473 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 HOXC6P09630 235 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 TAC1P20366 129 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 FITM2Q8N6M3 262 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 OR52K1Q8NGK4 314 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 SERPINI1Q99574 410 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 DPEP3Q9H4B8 488 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 CXorf56Q9H5V9 222 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 PPME1Q9Y570 386 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 H0YGN5 161 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 NVLO15381 856 aaKnown RBP11.35□□□□□ -0.59
COL27A1-204ENST00000477421 MTA2O94776 668 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 SETSIPP0DME0 302 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 SMIM10L2AP0DMW4 78 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 SMIM10L2BP0DMW5 78 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 PAPOLAP51003 745 aaKnown RBP11.35□□□□□ -0.59
COL27A1-204ENST00000477421 CAPRIN2Q6IMN6 1127 aaKnown RBP11.35□□□□□ -0.59
COL27A1-204ENST00000477421 GPR142Q7Z601 462 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 ZDHHC14Q8IZN3 488 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 TEX9Q8N6V9 391 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 CDC26Q8NHZ8 85 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 CLEC4CQ8WTT0 213 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 DNAJC9Q8WXX5 260 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 APOPT1Q96IL0 206 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 ZNF512Q96ME7 567 aaPredicted RBP11.35□□□□□ -0.59
COL27A1-204ENST00000477421 FRMD8P1Q9BZ68 369 aaPredicted RBP11.35□□□□□ -0.59
COL27A1-204ENST00000477421 PDZD7Q9H5P4 517 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 ACSS3Q9H6R3 686 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 PCDH18Q9HCL0 1135 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 ARHGEF38Q9NXL2 777 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 VANGL2Q9ULK5 521 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 NFS1Q9Y697 457 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.35□□□□□ -0.59
COL27A1-204ENST00000477421 SCAMP3O14828 347 aaKnown RBP11.35□□□□□ -0.59
COL27A1-204ENST00000477421 TPD52L2O43399 206 aaKnown RBP11.35□□□□□ -0.59
COL27A1-204ENST00000477421 PEX14O75381 377 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 LMNAP02545 664 aaKnown RBP11.35□□□□□ -0.59
COL27A1-204ENST00000477421 GFAPP14136 432 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 YBX3P16989 372 aaKnown RBP eCLIP11.35□□□□□ -0.59
COL27A1-204ENST00000477421 ECHS1P30084 290 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 FDFT1P37268 417 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 MPP3Q13368 585 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 TRIP10Q15642 601 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 ANKRD20A2Q5SQ80 823 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 C10orf120Q5SQS8 335 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 ANKRD20A1Q5TYW2 823 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 OTOAQ7RTW8 1153 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 YTHDF3Q7Z739 585 aaKnown RBP11.35□□□□□ -0.59
COL27A1-204ENST00000477421 PPHLN1Q8NEY8 458 aaKnown RBP11.35□□□□□ -0.59
COL27A1-204ENST00000477421 SCG3Q8WXD2 468 aaKnown RBP11.35□□□□□ -0.59
COL27A1-204ENST00000477421 RPRD1AQ96P16 312 aaPredicted RBP11.35□□□□□ -0.59
COL27A1-204ENST00000477421 FRMD8Q9BZ67 464 aaPredicted RBP11.35□□□□□ -0.59
COL27A1-204ENST00000477421 TSPYL2Q9H2G4 693 aaPredicted RBP11.35□□□□□ -0.59
COL27A1-204ENST00000477421 IL1RL2Q9HB29 575 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 TCRBV7S3A2A0A539 114 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 SPDYE5A6NIY4 337 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 TM9SF1O15321 606 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 PHGDHO43175 533 aaKnown RBP11.35□□□□□ -0.59
COL27A1-204ENST00000477421 UBTFL6P0CB48 400 aaPredicted RBP11.35□□□□□ -0.59
COL27A1-204ENST00000477421 RALBP11234 206 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 ICAM3P32942 547 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 MBTD1Q05BQ5 628 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 BST1Q10588 318 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 NAPEPLDQ6IQ20 393 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 ISLR2Q6UXK2 745 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 CHSY1Q86X52 802 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 LRRC40Q9H9A6 602 aa11.35□□□□□ -0.59
COL27A1-204ENST00000477421 ENO4A6NNW6 628 aa11.34□□□□□ -0.59
COL27A1-204ENST00000477421 PPEF2O14830 753 aa11.34□□□□□ -0.59
COL27A1-204ENST00000477421 SH3BP5O60239 455 aa11.34□□□□□ -0.59
COL27A1-204ENST00000477421 VAPBO95292 243 aa11.34□□□□□ -0.59
COL27A1-204ENST00000477421 CPA3P15088 417 aa11.34□□□□□ -0.59
COL27A1-204ENST00000477421 PTPN1P18031 435 aaKnown RBP11.34□□□□□ -0.59
COL27A1-204ENST00000477421 LMO2P25791 158 aa11.34□□□□□ -0.59
COL27A1-204ENST00000477421 PSEN2P49810 448 aa11.34□□□□□ -0.59
COL27A1-204ENST00000477421 PLK1P53350 603 aa11.34□□□□□ -0.59
COL27A1-204ENST00000477421 IL1RL1Q01638 556 aa11.34□□□□□ -0.59
COL27A1-204ENST00000477421 EFEMP1Q12805 493 aa11.34□□□□□ -0.59
COL27A1-204ENST00000477421 TIAM2Q8IVF5 1701 aa11.34□□□□□ -0.59
COL27A1-204ENST00000477421 TNS4Q8IZW8 715 aa11.34□□□□□ -0.59
COL27A1-204ENST00000477421 PLD5Q8N7P1 536 aa11.34□□□□□ -0.59
COL27A1-204ENST00000477421 B3GALNT2Q8NCR0 500 aa11.34□□□□□ -0.59
COL27A1-204ENST00000477421 URGCPQ8TCY9 931 aa11.34□□□□□ -0.59
COL27A1-204ENST00000477421 BLOC1S5Q8TDH9 187 aa11.34□□□□□ -0.59
COL27A1-204ENST00000477421 APBA2Q99767 749 aa11.34□□□□□ -0.59
COL27A1-204ENST00000477421 TKTL2Q9H0I9 626 aa11.34□□□□□ -0.59
COL27A1-204ENST00000477421 CHD4Q14839 1912 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms