RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 MBD1Q9UIS9 605 aaPredicted RBP11.29□□□□□ -0.6
SEC13-214ENST00000476597 RWDD2AQ9UIY3 292 aa11.29□□□□□ -0.6
SEC13-214ENST00000476597 STOML2Q9UJZ1 356 aa11.29□□□□□ -0.6
SEC13-214ENST00000476597 CEP295Q9C0D2 2601 aa11.28□□□□□ -0.6
SEC13-214ENST00000476597 WASH3PC4AMC7 463 aa11.28□□□□□ -0.6
SEC13-214ENST00000476597 M0QYV0 167 aa11.28□□□□□ -0.6
SEC13-214ENST00000476597 MAP3K13O43283 966 aa11.28□□□□□ -0.6
SEC13-214ENST00000476597 CALCAP01258 141 aa11.28□□□□□ -0.6
SEC13-214ENST00000476597 CYBBP04839 570 aa11.28□□□□□ -0.6
SEC13-214ENST00000476597 GPD2P43304 727 aa11.28□□□□□ -0.6
SEC13-214ENST00000476597 RPL34P49207 117 aaKnown RBP11.28□□□□□ -0.6
SEC13-214ENST00000476597 HARS2P49590 506 aaKnown RBP11.28□□□□□ -0.6
SEC13-214ENST00000476597 SPDYCQ5MJ68 293 aa11.28□□□□□ -0.6
SEC13-214ENST00000476597 STPG1Q5TH74 334 aa11.28□□□□□ -0.6
SEC13-214ENST00000476597 KIAA1211LQ6NV74 962 aa11.28□□□□□ -0.6
SEC13-214ENST00000476597 LPCAT2Q7L5N7 544 aa11.28□□□□□ -0.6
SEC13-214ENST00000476597 IPO4Q8TEX9 1081 aaKnown RBP11.28□□□□□ -0.6
SEC13-214ENST00000476597 PIWIL1Q96J94 861 aaKnown RBP11.28□□□□□ -0.6
SEC13-214ENST00000476597 SLC2A11Q9BYW1 496 aa11.28□□□□□ -0.6
SEC13-214ENST00000476597 INTS2Q9H0H0 1204 aaKnown RBP11.28□□□□□ -0.6
SEC13-214ENST00000476597 UBE2TQ9NPD8 197 aaPredicted RBP11.28□□□□□ -0.6
SEC13-214ENST00000476597 THAP10Q9P2Z0 257 aaPredicted RBP11.28□□□□□ -0.6
SEC13-214ENST00000476597 SFMBT1Q9UHJ3 866 aa11.28□□□□□ -0.6
SEC13-214ENST00000476597 CLEC4EQ9ULY5 219 aa11.28□□□□□ -0.6
SEC13-214ENST00000476597 CNOT1A5YKK6 2376 aaKnown RBP11.28□□□□□ -0.6
SEC13-214ENST00000476597 EPG5Q9HCE0 2579 aa11.27□□□□□ -0.6
SEC13-214ENST00000476597 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.27□□□□□ -0.61
SEC13-214ENST00000476597 PIK3R2O00459 728 aa11.27□□□□□ -0.61
SEC13-214ENST00000476597 NPC1O15118 1278 aa11.27□□□□□ -0.61
SEC13-214ENST00000476597 ZBTB24O43167 697 aaPredicted RBP11.27□□□□□ -0.61
SEC13-214ENST00000476597 FBXO21O94952 628 aa11.27□□□□□ -0.61
SEC13-214ENST00000476597 LATS1O95835 1130 aa11.27□□□□□ -0.61
SEC13-214ENST00000476597 DHPSP49366 369 aaPredicted RBP11.27□□□□□ -0.61
SEC13-214ENST00000476597 ENPP2Q13822 863 aa11.27□□□□□ -0.61
SEC13-214ENST00000476597 GEN1Q17RS7 908 aa11.27□□□□□ -0.61
SEC13-214ENST00000476597 MPPE1Q53F39 396 aa11.27□□□□□ -0.61
SEC13-214ENST00000476597 IL31Q6EBC2 164 aa11.27□□□□□ -0.61
SEC13-214ENST00000476597 TCEAL6Q6IPX3 200 aa11.27□□□□□ -0.61
SEC13-214ENST00000476597 MSANTD2Q6P1R3 559 aa11.27□□□□□ -0.61
SEC13-214ENST00000476597 CYP2U1Q7Z449 544 aa11.27□□□□□ -0.61
SEC13-214ENST00000476597 IRF2BP1Q8IU81 584 aa11.27□□□□□ -0.61
SEC13-214ENST00000476597 TMEFF1Q8IYR6 380 aa11.27□□□□□ -0.61
SEC13-214ENST00000476597 MLKLQ8NB16 471 aa11.27□□□□□ -0.61
SEC13-214ENST00000476597 DDI1Q8WTU0 396 aa11.27□□□□□ -0.61
SEC13-214ENST00000476597 DDX1Q92499 740 aaKnown RBP11.27□□□□□ -0.61
SEC13-214ENST00000476597 TCEAL3Q969E4 200 aa11.27□□□□□ -0.61
SEC13-214ENST00000476597 SPACA7Q96KW9 195 aa11.27□□□□□ -0.61
SEC13-214ENST00000476597 ELOVL2Q9NXB9 296 aa11.27□□□□□ -0.61
SEC13-214ENST00000476597 CACNA2D2Q9NY47 1150 aa11.27□□□□□ -0.61
SEC13-214ENST00000476597 CHD8Q9HCK8 2581 aa11.27□□□□□ -0.61
SEC13-214ENST00000476597 MYOFQ9NZM1 2061 aa11.27□□□□□ -0.61
SEC13-214ENST00000476597 ACACBO00763 2458 aa11.26□□□□□ -0.61
SEC13-214ENST00000476597 KHNYNO15037 678 aaKnown RBP11.26□□□□□ -0.61
SEC13-214ENST00000476597 TIMM44O43615 452 aa11.26□□□□□ -0.61
SEC13-214ENST00000476597 TSPAN3O60637 253 aa11.26□□□□□ -0.61
SEC13-214ENST00000476597 ZNF217O75362 1048 aa11.26□□□□□ -0.61
SEC13-214ENST00000476597 LTFP02788 710 aa11.26□□□□□ -0.61
SEC13-214ENST00000476597 FYNP06241 537 aa11.26□□□□□ -0.61
SEC13-214ENST00000476597 NDUFV2P19404 249 aa11.26□□□□□ -0.61
SEC13-214ENST00000476597 PTGER3P43115 390 aa11.26□□□□□ -0.61
SEC13-214ENST00000476597 ZNF445P59923 1031 aa11.26□□□□□ -0.61
SEC13-214ENST00000476597 MEA1Q16626 185 aa11.26□□□□□ -0.61
SEC13-214ENST00000476597 PPM1JQ5JR12 505 aa11.26□□□□□ -0.61
SEC13-214ENST00000476597 ADGRF1Q5T601 910 aa11.26□□□□□ -0.61
SEC13-214ENST00000476597 RNF43Q68DV7 783 aa11.26□□□□□ -0.61
SEC13-214ENST00000476597 SLC36A4Q6YBV0 504 aa11.26□□□□□ -0.61
SEC13-214ENST00000476597 ENOSF1Q7L5Y1 443 aa11.26□□□□□ -0.61
SEC13-214ENST00000476597 METTL3Q86U44 580 aaKnown RBP11.26□□□□□ -0.61
SEC13-214ENST00000476597 UNC45BQ8IWX7 931 aa11.26□□□□□ -0.61
SEC13-214ENST00000476597 SCUBE3Q8IX30 993 aa11.26□□□□□ -0.61
SEC13-214ENST00000476597 CLEC4CQ8WTT0 213 aa11.26□□□□□ -0.61
SEC13-214ENST00000476597 STK32AQ8WU08 396 aa11.26□□□□□ -0.61
SEC13-214ENST00000476597 ZNF606Q8WXB4 792 aa11.26□□□□□ -0.61
SEC13-214ENST00000476597 PIGKQ92643 395 aa11.26□□□□□ -0.61
SEC13-214ENST00000476597 AZIN2Q96A70 460 aa11.26□□□□□ -0.61
SEC13-214ENST00000476597 TMA16Q96EY4 203 aaKnown RBP11.26□□□□□ -0.61
SEC13-214ENST00000476597 FAM81BQ96LP2 452 aa11.26□□□□□ -0.61
SEC13-214ENST00000476597 CRACR2AQ9BSW2 395 aa11.26□□□□□ -0.61
SEC13-214ENST00000476597 TMEM74BQ9NUR3 256 aa11.26□□□□□ -0.61
SEC13-214ENST00000476597 CALCOCO1Q9P1Z2 691 aa11.26□□□□□ -0.61
SEC13-214ENST00000476597 RAD54BQ9Y620 910 aa11.26□□□□□ -0.61
SEC13-214ENST00000476597 STON1Q9Y6Q2 735 aa11.26□□□□□ -0.61
SEC13-214ENST00000476597 TPRP12270 2363 aaKnown RBP11.26□□□□□ -0.61
SEC13-214ENST00000476597 IGHV1OR15-9A0A0B4J2B8 117 aa11.25□□□□□ -0.61
SEC13-214ENST00000476597 LNP1A1A4G5 178 aa11.25□□□□□ -0.61
SEC13-214ENST00000476597 PATE3B3GLJ2 98 aa11.25□□□□□ -0.61
SEC13-214ENST00000476597 AP5Z1O43299 807 aa11.25□□□□□ -0.61
SEC13-214ENST00000476597 MSI1O43347 362 aaKnown RBP11.25□□□□□ -0.61
SEC13-214ENST00000476597 IGLV3-27P01718 113 aa11.25□□□□□ -0.61
SEC13-214ENST00000476597 KRT5P13647 590 aa11.25□□□□□ -0.61
SEC13-214ENST00000476597 SLC9A1P19634 815 aa11.25□□□□□ -0.61
SEC13-214ENST00000476597 HOXD9P28356 352 aaPredicted RBP11.25□□□□□ -0.61
SEC13-214ENST00000476597 IL12RB1P42701 662 aa11.25□□□□□ -0.61
SEC13-214ENST00000476597 ACADSBP45954 432 aa11.25□□□□□ -0.61
SEC13-214ENST00000476597 IRX4P78413 519 aa11.25□□□□□ -0.61
SEC13-214ENST00000476597 RING1Q06587 406 aa11.25□□□□□ -0.61
SEC13-214ENST00000476597 EIF4HQ15056 248 aaKnown RBP11.25□□□□□ -0.61
SEC13-214ENST00000476597 E2F5Q15329 346 aa11.25□□□□□ -0.61
SEC13-214ENST00000476597 TMEM215Q68D42 235 aa11.25□□□□□ -0.61
SEC13-214ENST00000476597 SMYD5Q6GMV2 418 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms