RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 CRY1Q16526 586 aa22.08■■□□□ 1.13
LIME1-204ENST00000476183 PREPLQ4J6C6 727 aaPredicted RBP22.08■■□□□ 1.13
LIME1-204ENST00000476183 CPXM2Q8N436 756 aa22.08■■□□□ 1.13
LIME1-204ENST00000476183 GOLGA1Q92805 767 aa22.08■■□□□ 1.13
LIME1-204ENST00000476183 EBF1Q9UH73 591 aa22.08■■□□□ 1.13
LIME1-204ENST00000476183 CLEC4EQ9ULY5 219 aa22.08■■□□□ 1.13
LIME1-204ENST00000476183 NAALADL1Q9UQQ1 740 aa22.08■■□□□ 1.13
LIME1-204ENST00000476183 CEP250Q9BV73 2442 aa22.07■■□□□ 1.12
LIME1-204ENST00000476183 GFRA2O00451 464 aa22.07■■□□□ 1.12
LIME1-204ENST00000476183 AXIN1O15169 862 aa22.07■■□□□ 1.12
LIME1-204ENST00000476183 IGLV3-27P01718 113 aa22.07■■□□□ 1.12
LIME1-204ENST00000476183 NCAM1P13591 858 aa22.07■■□□□ 1.12
LIME1-204ENST00000476183 UCHL3P15374 230 aa22.07■■□□□ 1.12
LIME1-204ENST00000476183 HARS2P49590 506 aaKnown RBP22.07■■□□□ 1.12
LIME1-204ENST00000476183 DGKGP49619 791 aa22.07■■□□□ 1.12
LIME1-204ENST00000476183 KLK7P49862 253 aa22.07■■□□□ 1.12
LIME1-204ENST00000476183 MYL5Q02045 173 aa22.07■■□□□ 1.12
LIME1-204ENST00000476183 HSF5Q4G112 596 aaPredicted RBP22.07■■□□□ 1.12
LIME1-204ENST00000476183 TSTD1Q8NFU3 115 aa22.07■■□□□ 1.12
LIME1-204ENST00000476183 DQX1Q8TE96 717 aaKnown RBP22.07■■□□□ 1.12
LIME1-204ENST00000476183 GAB3Q8WWW8 586 aa22.07■■□□□ 1.12
LIME1-204ENST00000476183 FAM149B1Q96BN6 582 aa22.07■■□□□ 1.12
LIME1-204ENST00000476183 PIWIL1Q96J94 861 aaKnown RBP22.07■■□□□ 1.12
LIME1-204ENST00000476183 CPXM1Q96SM3 734 aa22.07■■□□□ 1.12
LIME1-204ENST00000476183 NCDNQ9UBB6 729 aa22.07■■□□□ 1.12
LIME1-204ENST00000476183 STOML2Q9UJZ1 356 aa22.07■■□□□ 1.12
LIME1-204ENST00000476183 STARD13Q9Y3M8 1113 aa22.07■■□□□ 1.12
LIME1-204ENST00000476183 SART1O43290 800 aaKnown RBP22.06■■□□□ 1.12
LIME1-204ENST00000476183 TYRO3Q06418 890 aa22.06■■□□□ 1.12
LIME1-204ENST00000476183 NCAPHQ15003 741 aa22.06■■□□□ 1.12
LIME1-204ENST00000476183 SYPL2Q5VXT5 272 aa22.06■■□□□ 1.12
LIME1-204ENST00000476183 EGFLAMQ63HQ2 1017 aa22.06■■□□□ 1.12
LIME1-204ENST00000476183 ZNF513Q8N8E2 541 aaPredicted RBP22.06■■□□□ 1.12
LIME1-204ENST00000476183 C1orf131Q8NDD1 294 aaKnown RBP22.06■■□□□ 1.12
LIME1-204ENST00000476183 GANQ9H2C0 597 aa22.06■■□□□ 1.12
LIME1-204ENST00000476183 LHX5Q9H2C1 402 aa22.06■■□□□ 1.12
LIME1-204ENST00000476183 HSD3B7Q9H2F3 369 aa22.06■■□□□ 1.12
LIME1-204ENST00000476183 PLCB1Q9NQ66 1216 aa22.06■■□□□ 1.12
LIME1-204ENST00000476183 RAB23Q9ULC3 237 aa22.06■■□□□ 1.12
LIME1-204ENST00000476183 TSPAN3O60637 253 aa22.05■■□□□ 1.12
LIME1-204ENST00000476183 RPP40O75818 363 aaKnown RBP22.05■■□□□ 1.12
LIME1-204ENST00000476183 TAF5Q15542 800 aa22.05■■□□□ 1.12
LIME1-204ENST00000476183 LAIR1Q6GTX8 287 aa22.05■■□□□ 1.12
LIME1-204ENST00000476183 ANO7Q6IWH7 933 aa22.05■■□□□ 1.12
LIME1-204ENST00000476183 CEP68Q76N32 757 aa22.05■■□□□ 1.12
LIME1-204ENST00000476183 BEND5Q7L4P6 421 aa22.05■■□□□ 1.12
LIME1-204ENST00000476183 RASSF3Q86WH2 238 aa22.05■■□□□ 1.12
LIME1-204ENST00000476183 KIAA2013Q8IYS2 634 aa22.05■■□□□ 1.12
LIME1-204ENST00000476183 ADAM32Q8TC27 787 aa22.05■■□□□ 1.12
LIME1-204ENST00000476183 KCNV2Q8TDN2 545 aa22.05■■□□□ 1.12
LIME1-204ENST00000476183 PPP1R13BQ96KQ4 1090 aa22.05■■□□□ 1.12
LIME1-204ENST00000476183 FCRL2Q96LA5 508 aaPredicted RBP22.05■■□□□ 1.12
LIME1-204ENST00000476183 ACOX2Q99424 681 aa22.05■■□□□ 1.12
LIME1-204ENST00000476183 LATS1O95835 1130 aa22.04■■□□□ 1.12
LIME1-204ENST00000476183 ZNF18P17022 549 aa22.04■■□□□ 1.12
LIME1-204ENST00000476183 KRT9P35527 623 aa22.04■■□□□ 1.12
LIME1-204ENST00000476183 DGKEP52429 567 aa22.04■■□□□ 1.12
LIME1-204ENST00000476183 COPB1P53618 953 aaKnown RBP22.04■■□□□ 1.12
LIME1-204ENST00000476183 TBX4P57082 545 aa22.04■■□□□ 1.12
LIME1-204ENST00000476183 EOGTQ5NDL2 527 aa22.04■■□□□ 1.12
LIME1-204ENST00000476183 ADGRF1Q5T601 910 aa22.04■■□□□ 1.12
LIME1-204ENST00000476183 NUDT18Q6ZVK8 323 aa22.04■■□□□ 1.12
LIME1-204ENST00000476183 TAC4Q86UU9 113 aa22.04■■□□□ 1.12
LIME1-204ENST00000476183 FAM160A2Q8N612 972 aaPredicted RBP22.04■■□□□ 1.12
LIME1-204ENST00000476183 MDGA1Q8NFP4 955 aa22.04■■□□□ 1.12
LIME1-204ENST00000476183 DDI1Q8WTU0 396 aa22.04■■□□□ 1.12
LIME1-204ENST00000476183 STK33Q9BYT3 514 aa22.04■■□□□ 1.12
LIME1-204ENST00000476183 TPSD1Q9BZJ3 242 aa22.04■■□□□ 1.12
LIME1-204ENST00000476183 LIMA1Q9UHB6 759 aaKnown RBP22.04■■□□□ 1.12
LIME1-204ENST00000476183 SLC27A6Q9Y2P4 619 aa22.04■■□□□ 1.12
LIME1-204ENST00000476183 DCHS1Q96JQ0 3298 aa22.03■■□□□ 1.12
LIME1-204ENST00000476183 GOLGA6L7A0A1B0GV03 622 aa22.03■■□□□ 1.12
LIME1-204ENST00000476183 F8VZ95 297 aa22.03■■□□□ 1.12
LIME1-204ENST00000476183 DCLK1O15075 740 aa22.03■■□□□ 1.12
LIME1-204ENST00000476183 EPHB6O15197 1021 aa22.03■■□□□ 1.12
LIME1-204ENST00000476183 CYBBP04839 570 aa22.03■■□□□ 1.12
LIME1-204ENST00000476183 CYP11B1P15538 503 aa22.03■■□□□ 1.12
LIME1-204ENST00000476183 TGM1P22735 817 aa22.03■■□□□ 1.12
LIME1-204ENST00000476183 HOXD9P28356 352 aaPredicted RBP22.03■■□□□ 1.12
LIME1-204ENST00000476183 WASP42768 502 aa22.03■■□□□ 1.12
LIME1-204ENST00000476183 SGSHP51688 502 aa22.03■■□□□ 1.12
LIME1-204ENST00000476183 BPIFB4P59827 614 aa22.03■■□□□ 1.12
LIME1-204ENST00000476183 YWHAZP63104 245 aaKnown RBP22.03■■□□□ 1.12
LIME1-204ENST00000476183 PITX1P78337 314 aaPredicted RBP22.03■■□□□ 1.12
LIME1-204ENST00000476183 RING1Q06587 406 aa22.03■■□□□ 1.12
LIME1-204ENST00000476183 GEN1Q17RS7 908 aa22.03■■□□□ 1.12
LIME1-204ENST00000476183 PTPN20Q4JDL3 420 aa22.03■■□□□ 1.12
LIME1-204ENST00000476183 NUGGCQ68CJ6 796 aa22.03■■□□□ 1.12
LIME1-204ENST00000476183 CAVIN1Q6NZI2 390 aaKnown RBP22.03■■□□□ 1.12
LIME1-204ENST00000476183 KBTBD6Q86V97 674 aa22.03■■□□□ 1.12
LIME1-204ENST00000476183 DDX1Q92499 740 aaKnown RBP22.03■■□□□ 1.12
LIME1-204ENST00000476183 SLC39A13Q96H72 371 aa22.03■■□□□ 1.12
LIME1-204ENST00000476183 SERPINB11Q96P15 392 aa22.03■■□□□ 1.12
LIME1-204ENST00000476183 POPDC2Q9HBU9 364 aa22.03■■□□□ 1.12
LIME1-204ENST00000476183 GMEB2Q9UKD1 530 aa22.03■■□□□ 1.12
LIME1-204ENST00000476183 SIK3Q9Y2K2 1263 aa22.03■■□□□ 1.12
LIME1-204ENST00000476183 ABCA7Q8IZY2 2146 aa22.03■■□□□ 1.12
LIME1-204ENST00000476183 ERBB2P04626 1255 aa22.02■■□□□ 1.12
LIME1-204ENST00000476183 SLC6A4P31645 630 aa22.02■■□□□ 1.12
LIME1-204ENST00000476183 NNTQ13423 1086 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms