RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 PLATP00750 562 aa4.57□□□□□ -1.68
VPS13D-207ENST00000476169 LMNAP02545 664 aaKnown RBP4.57□□□□□ -1.68
VPS13D-207ENST00000476169 SPARCP09486 303 aa4.57□□□□□ -1.68
VPS13D-207ENST00000476169 FAM90A15PP0C7V4 464 aa4.57□□□□□ -1.68
VPS13D-207ENST00000476169 FAM90A14PP0C7W9 464 aa4.57□□□□□ -1.68
VPS13D-207ENST00000476169 COMTP21964 271 aa4.57□□□□□ -1.68
VPS13D-207ENST00000476169 TGM1P22735 817 aa4.57□□□□□ -1.68
VPS13D-207ENST00000476169 PRKCHP24723 683 aa4.57□□□□□ -1.68
VPS13D-207ENST00000476169 SLC5A2P31639 672 aa4.57□□□□□ -1.68
VPS13D-207ENST00000476169 ABCD1P33897 745 aa4.57□□□□□ -1.68
VPS13D-207ENST00000476169 ATP6V1E1P36543 226 aa4.57□□□□□ -1.68
VPS13D-207ENST00000476169 DPP6P42658 865 aa4.57□□□□□ -1.68
VPS13D-207ENST00000476169 MAGEA10P43363 369 aaPredicted RBP4.57□□□□□ -1.68
VPS13D-207ENST00000476169 NDUFV1P49821 464 aa4.57□□□□□ -1.68
VPS13D-207ENST00000476169 OCA2Q04671 838 aa4.57□□□□□ -1.68
VPS13D-207ENST00000476169 CSHL1Q14406 222 aa4.57□□□□□ -1.68
VPS13D-207ENST00000476169 PTCHD3Q3KNS1 767 aa4.57□□□□□ -1.68
VPS13D-207ENST00000476169 TBC1D10BQ4KMP7 808 aaPredicted RBP4.57□□□□□ -1.68
VPS13D-207ENST00000476169 PDCD4Q53EL6 469 aaKnown RBP4.57□□□□□ -1.68
VPS13D-207ENST00000476169 ZNF484Q5JVG2 852 aa4.57□□□□□ -1.68
VPS13D-207ENST00000476169 ARHGAP40Q5TG30 622 aa4.57□□□□□ -1.68
VPS13D-207ENST00000476169 MANEALQ5VSG8 457 aa4.57□□□□□ -1.68
VPS13D-207ENST00000476169 NAA35Q5VZE5 725 aa4.57□□□□□ -1.68
VPS13D-207ENST00000476169 DGAT2L7PQ6IED9 249 aa4.57□□□□□ -1.68
VPS13D-207ENST00000476169 RGS7BPQ6MZT1 257 aaPredicted RBP4.57□□□□□ -1.68
VPS13D-207ENST00000476169 NAA16Q6N069 864 aaPredicted RBP4.57□□□□□ -1.68
VPS13D-207ENST00000476169 GLB1LQ6UWU2 654 aa4.57□□□□□ -1.68
VPS13D-207ENST00000476169 IKBIPQ70UQ0 350 aa4.57□□□□□ -1.68
VPS13D-207ENST00000476169 HTR3DQ70Z44 454 aa4.57□□□□□ -1.68
VPS13D-207ENST00000476169 MAPKAPK5Q8IW41 473 aa4.57□□□□□ -1.68
VPS13D-207ENST00000476169 ZNF808Q8N4W9 903 aaPredicted RBP4.57□□□□□ -1.68
VPS13D-207ENST00000476169 FSIP1Q8NA03 581 aa4.57□□□□□ -1.68
VPS13D-207ENST00000476169 KCTD6Q8NC69 237 aa4.57□□□□□ -1.68
VPS13D-207ENST00000476169 LINS1Q8NG48 757 aa4.57□□□□□ -1.68
VPS13D-207ENST00000476169 FAM89AQ96GI7 184 aa4.57□□□□□ -1.68
VPS13D-207ENST00000476169 ZNF668Q96K58 619 aaPredicted RBP4.57□□□□□ -1.68
VPS13D-207ENST00000476169 FAM227BQ96M60 508 aa4.57□□□□□ -1.68
VPS13D-207ENST00000476169 FMNL2Q96PY5 1086 aa4.57□□□□□ -1.68
VPS13D-207ENST00000476169 USP44Q9H0E7 712 aa4.57□□□□□ -1.68
VPS13D-207ENST00000476169 GBA2Q9HCG7 927 aaPredicted RBP4.57□□□□□ -1.68
VPS13D-207ENST00000476169 ATP8A2Q9NTI2 1148 aa4.57□□□□□ -1.68
VPS13D-207ENST00000476169 TBC1D14Q9P2M4 693 aa4.57□□□□□ -1.68
VPS13D-207ENST00000476169 ACAD8Q9UKU7 415 aa4.57□□□□□ -1.68
VPS13D-207ENST00000476169 NDRG4Q9ULP0 352 aaKnown RBP4.57□□□□□ -1.68
VPS13D-207ENST00000476169 SUFUQ9UMX1 484 aa4.57□□□□□ -1.68
VPS13D-207ENST00000476169 NAALADL1Q9UQQ1 740 aa4.57□□□□□ -1.68
VPS13D-207ENST00000476169 PRAMEF33A0A0G2JMD5 474 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 F5H697 171 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 FYB1O15117 783 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 CD3EAPO15446 510 aaKnown RBP4.56□□□□□ -1.68
VPS13D-207ENST00000476169 GPR42O15529 346 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 SEPT4O43236 478 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 PRAMEF10O60809 474 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 RPS6KA4O75676 772 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 HLA-DOAP06340 250 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 ADRB2P07550 413 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 WEE2P0C1S8 567 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 ARP10275 920 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 UBL4AP11441 157 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 LAMP2P13473 410 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 HGFP14210 728 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 BMP7P18075 431 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 CD6P30203 668 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 PPIFP30405 207 aaKnown RBP4.56□□□□□ -1.68
VPS13D-207ENST00000476169 GCH1P30793 250 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 PPARGP37231 505 aaPredicted RBP4.56□□□□□ -1.68
VPS13D-207ENST00000476169 HADHAP40939 763 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 SCNN1GP51170 649 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 PPARDQ03181 441 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 FPGSQ05932 587 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 STK4Q13043 487 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 CRHR2Q13324 411 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 E2F2Q14209 437 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 C1orf141Q5JVX7 400 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 ZNF569Q5MCW4 686 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 LIPMQ5VYY2 423 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 ABLIM2Q6H8Q1 611 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 RPUSD3Q6P087 351 aaKnown RBP4.56□□□□□ -1.68
VPS13D-207ENST00000476169 TMPRSS9Q7Z410 1059 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 LIMS2Q7Z4I7 341 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 GDF7Q7Z4P5 450 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 CCDC91Q7Z6B0 441 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 SLC15A3Q8IY34 581 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 ADGRG5Q8IZF4 528 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 GALNT4Q8N4A0 578 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.56□□□□□ -1.68
VPS13D-207ENST00000476169 FAM71DQ8N9W8 422 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 TOR1AIP2Q8NFQ8 470 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 NFKBIDQ8NI38 313 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 MGARPQ8TDB4 240 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 ABHD5Q8WTS1 349 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 TMEM171Q8WVE6 324 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 SNX19Q92543 992 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 TMEM125Q96AQ2 219 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 FUZQ9BT04 418 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 TTPALQ9BTX7 342 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 MAK16Q9BXY0 300 aaKnown RBP4.56□□□□□ -1.68
VPS13D-207ENST00000476169 TRIM5Q9C035 493 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 ZCWPW1Q9H0M4 648 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 CCDC134Q9H6E4 229 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms