RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 TBXAS1P24557 533 aaPredicted RBP19.2■□□□□ 0.66
ECHDC1-214ENST00000474289 CDK9P50750 372 aaKnown RBP19.2■□□□□ 0.66
ECHDC1-214ENST00000474289 TAF5Q15542 800 aa19.2■□□□□ 0.66
ECHDC1-214ENST00000474289 FAXCQ5TGI0 409 aa19.2■□□□□ 0.66
ECHDC1-214ENST00000474289 WDR78Q5VTH9 848 aa19.2■□□□□ 0.66
ECHDC1-214ENST00000474289 SCARA3Q6AZY7 606 aa19.2■□□□□ 0.66
ECHDC1-214ENST00000474289 NCCRP1Q6ZVX7 275 aaPredicted RBP19.2■□□□□ 0.66
ECHDC1-214ENST00000474289 CROCCP3Q8IVE0 287 aa19.2■□□□□ 0.66
ECHDC1-214ENST00000474289 WDTC1Q8N5D0 677 aa19.2■□□□□ 0.66
ECHDC1-214ENST00000474289 TBC1D22BQ9NU19 505 aa19.2■□□□□ 0.66
ECHDC1-214ENST00000474289 LY75O60449 1722 aa19.19■□□□□ 0.66
ECHDC1-214ENST00000474289 LSM8O95777 96 aaKnown RBP19.19■□□□□ 0.66
ECHDC1-214ENST00000474289 ZNF23P17027 643 aa19.19■□□□□ 0.66
ECHDC1-214ENST00000474289 HADHQ16836 314 aaKnown RBP19.19■□□□□ 0.66
ECHDC1-214ENST00000474289 TAS1R3Q7RTX0 852 aa19.19■□□□□ 0.66
ECHDC1-214ENST00000474289 SAMD3Q8N6K7 520 aa19.19■□□□□ 0.66
ECHDC1-214ENST00000474289 KCTD6Q8NC69 237 aa19.19■□□□□ 0.66
ECHDC1-214ENST00000474289 TMEM35BQ8NCS4 154 aa19.19■□□□□ 0.66
ECHDC1-214ENST00000474289 JOSD2Q8TAC2 188 aa19.19■□□□□ 0.66
ECHDC1-214ENST00000474289 RSPH1Q8WYR4 309 aa19.19■□□□□ 0.66
ECHDC1-214ENST00000474289 RTKNQ9BST9 563 aa19.19■□□□□ 0.66
ECHDC1-214ENST00000474289 YIPF2Q9BWQ6 316 aa19.19■□□□□ 0.66
ECHDC1-214ENST00000474289 ARHGAP28Q9P2N2 729 aa19.19■□□□□ 0.66
ECHDC1-214ENST00000474289 PCSK1NQ9UHG2 260 aa19.19■□□□□ 0.66
ECHDC1-214ENST00000474289 SLC15A5A6NIM6 579 aa19.19■□□□□ 0.66
ECHDC1-214ENST00000474289 POLRMTO00411 1230 aaKnown RBP19.19■□□□□ 0.66
ECHDC1-214ENST00000474289 ALOX15P16050 662 aaPredicted RBP19.19■□□□□ 0.66
ECHDC1-214ENST00000474289 FLOT2Q14254 428 aa19.19■□□□□ 0.66
ECHDC1-214ENST00000474289 PCLAFQ15004 111 aa19.19■□□□□ 0.66
ECHDC1-214ENST00000474289 CYTH1Q15438 398 aa19.19■□□□□ 0.66
ECHDC1-214ENST00000474289 N4BP2L1Q5TBK1 243 aaPredicted RBP19.19■□□□□ 0.66
ECHDC1-214ENST00000474289 GPAT2Q6NUI2 795 aa19.19■□□□□ 0.66
ECHDC1-214ENST00000474289 DHRS4L2Q6PKH6 230 aa19.19■□□□□ 0.66
ECHDC1-214ENST00000474289 PACS1Q6VY07 963 aa19.19■□□□□ 0.66
ECHDC1-214ENST00000474289 PPP4R1Q8TF05 950 aa19.19■□□□□ 0.66
ECHDC1-214ENST00000474289 CALN1Q9BXU9 219 aa19.19■□□□□ 0.66
ECHDC1-214ENST00000474289 RRN3Q9NYV6 651 aa19.19■□□□□ 0.66
ECHDC1-214ENST00000474289 ZNHIT2Q9UHR6 403 aa19.19■□□□□ 0.66
ECHDC1-214ENST00000474289 ZNF541Q9H0D2 1346 aa19.19■□□□□ 0.66
ECHDC1-214ENST00000474289 EP400Q96L91 3159 aa19.18■□□□□ 0.66
ECHDC1-214ENST00000474289 ITGBL1O95965 494 aaPredicted RBP19.18■□□□□ 0.66
ECHDC1-214ENST00000474289 SERPINE1P05121 402 aa19.18■□□□□ 0.66
ECHDC1-214ENST00000474289 CD1EP15812 388 aa19.18■□□□□ 0.66
ECHDC1-214ENST00000474289 HSPA13P48723 471 aa19.18■□□□□ 0.66
ECHDC1-214ENST00000474289 ENTPD1P49961 510 aa19.18■□□□□ 0.66
ECHDC1-214ENST00000474289 CBLBQ13191 982 aa19.18■□□□□ 0.66
ECHDC1-214ENST00000474289 TKFCQ3LXA3 575 aa19.18■□□□□ 0.66
ECHDC1-214ENST00000474289 LPCAT2Q7L5N7 544 aa19.18■□□□□ 0.66
ECHDC1-214ENST00000474289 TSPAN14Q8NG11 270 aa19.18■□□□□ 0.66
ECHDC1-214ENST00000474289 KBTBD7Q8WVZ9 684 aa19.18■□□□□ 0.66
ECHDC1-214ENST00000474289 BIRC8Q96P09 236 aa19.18■□□□□ 0.66
ECHDC1-214ENST00000474289 CCT7Q99832 543 aa19.18■□□□□ 0.66
ECHDC1-214ENST00000474289 SLX1AQ9BQ83 275 aa19.18■□□□□ 0.66
ECHDC1-214ENST00000474289 COL20A1Q9P218 1284 aa19.18■□□□□ 0.66
ECHDC1-214ENST00000474289 SLX4Q8IY92 1834 aa19.18■□□□□ 0.66
ECHDC1-214ENST00000474289 KLRG2A4D1S0 409 aaPredicted RBP19.17■□□□□ 0.66
ECHDC1-214ENST00000474289 FAM159BA6NKW6 160 aa19.17■□□□□ 0.66
ECHDC1-214ENST00000474289 PDGFRBP09619 1106 aa19.17■□□□□ 0.66
ECHDC1-214ENST00000474289 PRDX6P30041 224 aa19.17■□□□□ 0.66
ECHDC1-214ENST00000474289 MSX2P35548 267 aaPredicted RBP19.17■□□□□ 0.66
ECHDC1-214ENST00000474289 THOP1P52888 689 aa19.17■□□□□ 0.66
ECHDC1-214ENST00000474289 KLF10Q13118 480 aa19.17■□□□□ 0.66
ECHDC1-214ENST00000474289 ZNF394Q53GI3 561 aa19.17■□□□□ 0.66
ECHDC1-214ENST00000474289 ZFP1Q6P2D0 407 aa19.17■□□□□ 0.66
ECHDC1-214ENST00000474289 UBR7Q8N806 425 aa19.17■□□□□ 0.66
ECHDC1-214ENST00000474289 HSPH1Q92598 858 aa19.17■□□□□ 0.66
ECHDC1-214ENST00000474289 ZNF512Q96ME7 567 aaPredicted RBP19.17■□□□□ 0.66
ECHDC1-214ENST00000474289 PKP2Q99959 881 aa19.17■□□□□ 0.66
ECHDC1-214ENST00000474289 FAM96AQ9H5X1 160 aa19.17■□□□□ 0.66
ECHDC1-214ENST00000474289 TDRD3Q9H7E2 651 aaKnown RBP19.17■□□□□ 0.66
ECHDC1-214ENST00000474289 PFDN4Q9NQP4 134 aa19.17■□□□□ 0.66
ECHDC1-214ENST00000474289 MAN1C1Q9NR34 630 aa19.17■□□□□ 0.66
ECHDC1-214ENST00000474289 NRXN2Q9P2S2 1712 aa19.17■□□□□ 0.66
ECHDC1-214ENST00000474289 KANSL1LA0AUZ9 987 aa19.17■□□□□ 0.66
ECHDC1-214ENST00000474289 TBC1D12O60347 775 aa19.17■□□□□ 0.66
ECHDC1-214ENST00000474289 KLHL41O60662 606 aa19.17■□□□□ 0.66
ECHDC1-214ENST00000474289 XRCC1P18887 633 aaPredicted RBP19.17■□□□□ 0.66
ECHDC1-214ENST00000474289 NOMO1Q15155 1222 aa19.17■□□□□ 0.66
ECHDC1-214ENST00000474289 VPS72Q15906 364 aa19.17■□□□□ 0.66
ECHDC1-214ENST00000474289 C10orf107Q8IVU9 208 aa19.17■□□□□ 0.66
ECHDC1-214ENST00000474289 TRIML2Q8N7C3 387 aa19.17■□□□□ 0.66
ECHDC1-214ENST00000474289 HAUS8Q9BT25 410 aa19.17■□□□□ 0.66
ECHDC1-214ENST00000474289 PLGRKTQ9HBL7 147 aa19.17■□□□□ 0.66
ECHDC1-214ENST00000474289 TJP2Q9UDY2 1190 aa19.17■□□□□ 0.66
ECHDC1-214ENST00000474289 ARID2Q68CP9 1835 aa19.17■□□□□ 0.66
ECHDC1-214ENST00000474289 CNTNAP2Q9UHC6 1331 aa19.16■□□□□ 0.66
ECHDC1-214ENST00000474289 PLIN3O60664 434 aa19.16■□□□□ 0.66
ECHDC1-214ENST00000474289 APRTP07741 180 aa19.16■□□□□ 0.66
ECHDC1-214ENST00000474289 PSMC3P17980 439 aa19.16■□□□□ 0.66
ECHDC1-214ENST00000474289 NUDT2P50583 147 aa19.16■□□□□ 0.66
ECHDC1-214ENST00000474289 NAA20P61599 178 aa19.16■□□□□ 0.66
ECHDC1-214ENST00000474289 MMRN1Q13201 1228 aa19.16■□□□□ 0.66
ECHDC1-214ENST00000474289 BTG3Q14201 252 aaPredicted RBP19.16■□□□□ 0.66
ECHDC1-214ENST00000474289 C16orf72Q14CZ0 275 aa19.16■□□□□ 0.66
ECHDC1-214ENST00000474289 TIFABQ6ZNK6 161 aa19.16■□□□□ 0.66
ECHDC1-214ENST00000474289 NLRP7Q8WX94 980 aa19.16■□□□□ 0.66
ECHDC1-214ENST00000474289 NGLY1Q96IV0 654 aa19.16■□□□□ 0.66
ECHDC1-214ENST00000474289 LENG8Q96PV6 779 aaPredicted RBP19.16■□□□□ 0.66
ECHDC1-214ENST00000474289 INO80BQ9C086 356 aaPredicted RBP19.16■□□□□ 0.66
ECHDC1-214ENST00000474289 ANKEF1Q9NU02 776 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms