RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, human

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM50B-208	ENST00000474272	IFRD1	O00458	451 aa	Predicted RBP	4.21	□□□□□ -1.74
TMEM50B-208	ENST00000474272	AREL1	O15033	823 aa		4.21	□□□□□ -1.74
TMEM50B-208	ENST00000474272	CCP110	O43303	1012 aa		4.21	□□□□□ -1.74
TMEM50B-208	ENST00000474272	SRGAP2	O75044	1071 aa		4.21	□□□□□ -1.74
TMEM50B-208	ENST00000474272	BTF3	P20290	206 aa	Known RBP	4.21	□□□□□ -1.74
TMEM50B-208	ENST00000474272	EEF1G	P26641	437 aa	Known RBP	4.21	□□□□□ -1.74
TMEM50B-208	ENST00000474272	PRKAR1B	P31321	381 aa		4.21	□□□□□ -1.74
TMEM50B-208	ENST00000474272	CDKN2A	P42771	156 aa	Known RBP	4.21	□□□□□ -1.74
TMEM50B-208	ENST00000474272	PTDSS1	P48651	473 aa	Known RBP	4.21	□□□□□ -1.74
TMEM50B-208	ENST00000474272	CPT1A	P50416	773 aa		4.21	□□□□□ -1.74
TMEM50B-208	ENST00000474272	ITGA8	P53708	1063 aa		4.21	□□□□□ -1.74
TMEM50B-208	ENST00000474272	BCAT1	P54687	386 aa		4.21	□□□□□ -1.74
TMEM50B-208	ENST00000474272	CHAF1A	Q13111	956 aa	Predicted RBP	4.21	□□□□□ -1.74
TMEM50B-208	ENST00000474272	SLC14A1	Q13336	389 aa		4.21	□□□□□ -1.74
TMEM50B-208	ENST00000474272	ARHGEF7	Q14155	803 aa		4.21	□□□□□ -1.74
TMEM50B-208	ENST00000474272	SLC29A2	Q14542	456 aa		4.21	□□□□□ -1.74
TMEM50B-208	ENST00000474272	KCNB1	Q14721	858 aa		4.21	□□□□□ -1.74
TMEM50B-208	ENST00000474272	TUBB8	Q3ZCM7	444 aa		4.21	□□□□□ -1.74
TMEM50B-208	ENST00000474272	CC2D1B	Q5T0F9	858 aa	Known RBP	4.21	□□□□□ -1.74
TMEM50B-208	ENST00000474272	UBAP2	Q5T6F2	1119 aa	Known RBP	4.21	□□□□□ -1.74
TMEM50B-208	ENST00000474272	BEND5	Q7L4P6	421 aa		4.21	□□□□□ -1.74
TMEM50B-208	ENST00000474272	TXLNB	Q8N3L3	684 aa		4.21	□□□□□ -1.74
TMEM50B-208	ENST00000474272	SDR16C5	Q8N3Y7	309 aa		4.21	□□□□□ -1.74
TMEM50B-208	ENST00000474272	ARFGAP1	Q8N6T3	406 aa		4.21	□□□□□ -1.74
TMEM50B-208	ENST00000474272	LINC01465	Q8N7H1	131 aa		4.21	□□□□□ -1.74
TMEM50B-208	ENST00000474272	ENAH	Q8N8S7	591 aa	Predicted RBP	4.21	□□□□□ -1.74
TMEM50B-208	ENST00000474272	MORC4	Q8TE76	937 aa		4.21	□□□□□ -1.74
TMEM50B-208	ENST00000474272	IPCEF1	Q8WWN9	437 aa	Predicted RBP	4.21	□□□□□ -1.74
TMEM50B-208	ENST00000474272	WDYHV1	Q96HA8	205 aa		4.21	□□□□□ -1.74
TMEM50B-208	ENST00000474272	SELENOO	Q9BVL4	669 aa		4.21	□□□□□ -1.74
TMEM50B-208	ENST00000474272	TTLL2	Q9BWV7	592 aa		4.21	□□□□□ -1.74
TMEM50B-208	ENST00000474272	STK33	Q9BYT3	514 aa		4.21	□□□□□ -1.74
TMEM50B-208	ENST00000474272	DHX36	Q9H2U1	1008 aa	Known RBP	4.21	□□□□□ -1.74
TMEM50B-208	ENST00000474272	ZSCAN32	Q9NX65	697 aa		4.21	□□□□□ -1.74
TMEM50B-208	ENST00000474272	ASAP1	Q9ULH1	1129 aa		4.21	□□□□□ -1.74
TMEM50B-208	ENST00000474272	CAPN11	Q9UMQ6	739 aa		4.21	□□□□□ -1.74
TMEM50B-208	ENST00000474272	MAN2B2	Q9Y2E5	1009 aa		4.21	□□□□□ -1.74
TMEM50B-208	ENST00000474272	ARID4B	Q4LE39	1312 aa	Predicted RBP	4.21	□□□□□ -1.74
TMEM50B-208	ENST00000474272	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	4.2	□□□□□ -1.74
TMEM50B-208	ENST00000474272	FAM234B	A2RU67	622 aa		4.2	□□□□□ -1.74
TMEM50B-208	ENST00000474272	FAM90A8P	A6NJQ4	464 aa		4.2	□□□□□ -1.74
TMEM50B-208	ENST00000474272	RGS10	O43665	173 aa		4.2	□□□□□ -1.74
TMEM50B-208	ENST00000474272	RASAL1	O95294	804 aa		4.2	□□□□□ -1.74
TMEM50B-208	ENST00000474272	NDST3	O95803	873 aa		4.2	□□□□□ -1.74
TMEM50B-208	ENST00000474272	FAM90A13P	P0C7W8	464 aa		4.2	□□□□□ -1.74
TMEM50B-208	ENST00000474272	FAM90A24P	P0C7X0	464 aa		4.2	□□□□□ -1.74
TMEM50B-208	ENST00000474272	MYL4	P12829	197 aa		4.2	□□□□□ -1.74
TMEM50B-208	ENST00000474272	HGF	P14210	728 aa		4.2	□□□□□ -1.74
TMEM50B-208	ENST00000474272	GABRB3	P28472	473 aa		4.2	□□□□□ -1.74
TMEM50B-208	ENST00000474272	UQCRC1	P31930	480 aa		4.2	□□□□□ -1.74
TMEM50B-208	ENST00000474272	TNFAIP2	Q03169	654 aa		4.2	□□□□□ -1.74
TMEM50B-208	ENST00000474272	MTX1	Q13505	466 aa		4.2	□□□□□ -1.74
TMEM50B-208	ENST00000474272	KCNAB1	Q14722	419 aa		4.2	□□□□□ -1.74
TMEM50B-208	ENST00000474272	KRT72	Q14CN4	511 aa		4.2	□□□□□ -1.74
TMEM50B-208	ENST00000474272	INSC	Q1MX18	579 aa		4.2	□□□□□ -1.74
TMEM50B-208	ENST00000474272	GRAMD1B	Q3KR37	738 aa		4.2	□□□□□ -1.74
TMEM50B-208	ENST00000474272	CACHD1	Q5VU97	1274 aa		4.2	□□□□□ -1.74
TMEM50B-208	ENST00000474272	PLAG1	Q6DJT9	500 aa		4.2	□□□□□ -1.74
TMEM50B-208	ENST00000474272	KRT28	Q7Z3Y7	464 aa		4.2	□□□□□ -1.74
TMEM50B-208	ENST00000474272	EXOC8	Q8IYI6	725 aa		4.2	□□□□□ -1.74
TMEM50B-208	ENST00000474272	C16orf71	Q8IYS4	520 aa	Predicted RBP	4.2	□□□□□ -1.74
TMEM50B-208	ENST00000474272	ZNF566	Q969W8	418 aa		4.2	□□□□□ -1.74
TMEM50B-208	ENST00000474272	TMEM41A	Q96HV5	264 aa		4.2	□□□□□ -1.74
TMEM50B-208	ENST00000474272	SCNM1	Q9BWG6	230 aa		4.2	□□□□□ -1.74
TMEM50B-208	ENST00000474272	MLXIP	Q9HAP2	919 aa		4.2	□□□□□ -1.74
TMEM50B-208	ENST00000474272	HEYL	Q9NQ87	328 aa	Predicted RBP	4.2	□□□□□ -1.74
TMEM50B-208	ENST00000474272	ZBTB40	Q9NUA8	1239 aa		4.2	□□□□□ -1.74
TMEM50B-208	ENST00000474272	DKK4	Q9UBT3	224 aa		4.2	□□□□□ -1.74
TMEM50B-208	ENST00000474272	KCNQ3	O43525	872 aa		4.19	□□□□□ -1.74
TMEM50B-208	ENST00000474272	PLA2G6	O60733	806 aa		4.19	□□□□□ -1.74
TMEM50B-208	ENST00000474272	TCEA3	O75764	348 aa		4.19	□□□□□ -1.74
TMEM50B-208	ENST00000474272	EIF3J	O75822	258 aa	Known RBP	4.19	□□□□□ -1.74
TMEM50B-208	ENST00000474272	PIAS2	O75928	621 aa		4.19	□□□□□ -1.74
TMEM50B-208	ENST00000474272	INMT	O95050	263 aa		4.19	□□□□□ -1.74
TMEM50B-208	ENST00000474272	TPH1	P17752	444 aa		4.19	□□□□□ -1.74
TMEM50B-208	ENST00000474272	TNFRSF1B	P20333	461 aa		4.19	□□□□□ -1.74
TMEM50B-208	ENST00000474272	TEC	P42680	631 aa		4.19	□□□□□ -1.74
TMEM50B-208	ENST00000474272	CPA2	P48052	419 aa		4.19	□□□□□ -1.74
TMEM50B-208	ENST00000474272	COPA	P53621	1224 aa		4.19	□□□□□ -1.74
TMEM50B-208	ENST00000474272	RPS13	P62277	151 aa	Known RBP	4.19	□□□□□ -1.74
TMEM50B-208	ENST00000474272	DEUP1	Q05D60	604 aa		4.19	□□□□□ -1.74
TMEM50B-208	ENST00000474272	SRSF1	Q07955	248 aa	Known RBP eCLIP	4.19	□□□□□ -1.74
TMEM50B-208	ENST00000474272	STIM1	Q13586	685 aa		4.19	□□□□□ -1.74
TMEM50B-208	ENST00000474272	STARD3	Q14849	445 aa		4.19	□□□□□ -1.74
TMEM50B-208	ENST00000474272	MFSD13A	Q14CX5	517 aa		4.19	□□□□□ -1.74
TMEM50B-208	ENST00000474272	ZNF750	Q32MQ0	723 aa		4.19	□□□□□ -1.74
TMEM50B-208	ENST00000474272	ZNF585B	Q52M93	769 aa		4.19	□□□□□ -1.74
TMEM50B-208	ENST00000474272	CRTC1	Q6UUV9	634 aa		4.19	□□□□□ -1.74
TMEM50B-208	ENST00000474272	DEF8	Q6ZN54	512 aa		4.19	□□□□□ -1.74
TMEM50B-208	ENST00000474272	SYTL1	Q8IYJ3	562 aa		4.19	□□□□□ -1.74
TMEM50B-208	ENST00000474272	GLIS1	Q8NBF1	620 aa		4.19	□□□□□ -1.74
TMEM50B-208	ENST00000474272	THOC3	Q96J01	351 aa	Known RBP	4.19	□□□□□ -1.74
TMEM50B-208	ENST00000474272	ZFYVE19	Q96K21	471 aa		4.19	□□□□□ -1.74
TMEM50B-208	ENST00000474272	VN1R3	Q9BXE9	311 aa		4.19	□□□□□ -1.74
TMEM50B-208	ENST00000474272	CHMP4A	Q9BY43	222 aa		4.19	□□□□□ -1.74
TMEM50B-208	ENST00000474272	MAGEB5	Q9BZ81	275 aa		4.19	□□□□□ -1.74
TMEM50B-208	ENST00000474272	SNX15	Q9NRS6	342 aa		4.19	□□□□□ -1.74
TMEM50B-208	ENST00000474272	SLC39A10	Q9ULF5	831 aa		4.19	□□□□□ -1.74
TMEM50B-208	ENST00000474272	LRCH1	Q9Y2L9	728 aa		4.19	□□□□□ -1.74
TMEM50B-208	ENST00000474272	CEP83	Q9Y592	693 aa		4.19	□□□□□ -1.74

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