RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 SPACA1Q9HBV2 294 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 MRM3Q9HC36 420 aaKnown RBP6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 AGPAT3Q9NRZ7 376 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 STX8Q9UNK0 236 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 TNFSF13BQ9Y275 285 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 PCDHB6Q9Y5E3 794 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 PCDHGA2Q9Y5H1 932 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 DMRT1Q9Y5R6 373 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 GOLGA8JA6NMD2 632 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 E9PBE3 544 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 GOLGA8TH3BQL2 631 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 J3QL48 77 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 TAF4O00268 1085 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 CPNE3O75131 537 aaKnown RBP6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 GALTP07902 379 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 GOLGA8HP0CJ92 632 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 GAAP10253 952 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 C6P13671 934 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 ANPEPP15144 967 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 PEX2P28328 305 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 ADSLP30566 484 aaPredicted RBP6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 PPP1R2P41236 205 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 DPP6P42658 865 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 ADARP55265 1226 aaKnown RBP6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 DSC2Q02487 901 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 TLE2Q04725 743 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 DNM1Q05193 864 aaKnown RBP6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 TRIM25Q14258 630 aaKnown RBP6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 STARD3Q14849 445 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 VEPH1Q14D04 833 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 ZRSR1Q15695 479 aaKnown RBP6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 TSTQ16762 297 aaKnown RBP6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 CES4AQ5XG92 561 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 CWF19L1Q69YN2 538 aaKnown RBP6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 RCSD1Q6JBY9 416 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 PPP1R2P3Q6NXS1 205 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 TRIM65Q6PJ69 517 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 SLC2A7Q6PXP3 512 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 MARK2Q7KZI7 788 aaKnown RBP6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 HDXQ7Z353 690 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 CACNA2D4Q7Z3S7 1137 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 AKAP14Q86UN6 197 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 BBS5Q8N3I7 341 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 GANCQ8TET4 914 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 TSPEARQ8WU66 669 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 IP6K1Q92551 441 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 SLC22A18Q96BI1 424 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 SPACA9Q96E40 222 aaPredicted RBP6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 TRERF1Q96PN7 1200 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 SELENOSQ9BQE4 189 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 NUP85Q9BW27 656 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 PARD6BQ9BYG5 372 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 PARVBQ9HBI1 364 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 DLL3Q9NYJ7 618 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 MIS18AQ9NYP9 233 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 MAD2L2Q9UI95 211 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 ERVK-19Q9WJR5 959 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 DLGAP4Q9Y2H0 992 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 NAALAD2Q9Y3Q0 740 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 PCDHGB2Q9Y5G2 931 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 WASF2Q9Y6W5 498 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 PMF1-BGLAPU3KQ54 211 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 NCOR2Q9Y618 2525 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 CCDC171Q6TFL3 1326 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 TTC24A2A3L6 582 aaPredicted RBP6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 FAM227AF5H4B4 570 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 CACNG3O60359 315 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 PHF2O75151 1096 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 BCAS2O75934 225 aaPredicted RBP6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 ATP5HO75947 161 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 TSPAN9O75954 239 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 ANXA6P08133 673 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 TXNP10599 105 aaKnown RBP6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 DDX5P17844 614 aaKnown RBP6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 ACSL1P33121 698 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 RFC2P35250 354 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 ADRA1BP35368 520 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 THPOP40225 353 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 NNMTP40261 264 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 GDI2P50395 445 aaKnown RBP6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 PPP5CP53041 499 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 ZNF445P59923 1031 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 ERVK-9P63128 1117 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 DHX9Q08211 1270 aaKnown RBP6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 RPA4Q13156 261 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 CHIT1Q13231 466 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 NNTQ13423 1086 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 ARHGAP19Q14CB8 494 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 NFIL3Q16649 462 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 SMU1Q2TAY7 513 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 HSP90AA4PQ58FG1 418 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 PGM2L1Q6PCE3 622 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 KDM7AQ6ZMT4 941 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 BMP8AQ7Z5Y6 402 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 RABEPKQ7Z6M1 372 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 CPOQ8IVL8 374 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 PHC2Q8IXK0 858 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 CCDC105Q8IYK2 499 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 LRRC34Q8IZ02 419 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 ST13P4Q8IZP2 240 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms