RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 ADGRF1Q5T601 910 aa11.67□□□□□ -0.54
CKS1B-206ENST00000474215 SDE2Q6IQ49 451 aa11.67□□□□□ -0.54
CKS1B-206ENST00000474215 ANO7Q6IWH7 933 aa11.67□□□□□ -0.54
CKS1B-206ENST00000474215 DPY19L2P1Q6NXN4 242 aa11.67□□□□□ -0.54
CKS1B-206ENST00000474215 TOGARAM2Q6ZUX3 1019 aa11.67□□□□□ -0.54
CKS1B-206ENST00000474215 TMEM110Q86TL2 294 aa11.67□□□□□ -0.54
CKS1B-206ENST00000474215 KBTBD6Q86V97 674 aa11.67□□□□□ -0.54
CKS1B-206ENST00000474215 FAM217AQ8IXS0 508 aa11.67□□□□□ -0.54
CKS1B-206ENST00000474215 DDI1Q8WTU0 396 aa11.67□□□□□ -0.54
CKS1B-206ENST00000474215 LOXL4Q96JB6 756 aa11.67□□□□□ -0.54
CKS1B-206ENST00000474215 PARD6AQ9NPB6 346 aa11.67□□□□□ -0.54
CKS1B-206ENST00000474215 ZDHHC4Q9NPG8 344 aa11.67□□□□□ -0.54
CKS1B-206ENST00000474215 CYTH4Q9UIA0 394 aa11.67□□□□□ -0.54
CKS1B-206ENST00000474215 STOML2Q9UJZ1 356 aa11.67□□□□□ -0.54
CKS1B-206ENST00000474215 AJAP1Q9UKB5 411 aaPredicted RBP11.67□□□□□ -0.54
CKS1B-206ENST00000474215 OTOGLQ3ZCN5 2332 aa11.67□□□□□ -0.54
CKS1B-206ENST00000474215 DCLK1O15075 740 aa11.66□□□□□ -0.54
CKS1B-206ENST00000474215 PAPSS1O43252 624 aaPredicted RBP11.66□□□□□ -0.54
CKS1B-206ENST00000474215 LATS1O95835 1130 aa11.66□□□□□ -0.54
CKS1B-206ENST00000474215 IGLV3-27P01718 113 aa11.66□□□□□ -0.54
CKS1B-206ENST00000474215 NCAM1P13591 858 aa11.66□□□□□ -0.54
CKS1B-206ENST00000474215 NTSR1P30989 418 aa11.66□□□□□ -0.54
CKS1B-206ENST00000474215 CLCN1P35523 988 aa11.66□□□□□ -0.54
CKS1B-206ENST00000474215 ID4P47928 161 aa11.66□□□□□ -0.54
CKS1B-206ENST00000474215 BPIFB4P59827 614 aa11.66□□□□□ -0.54
CKS1B-206ENST00000474215 RING1Q06587 406 aa11.66□□□□□ -0.54
CKS1B-206ENST00000474215 KCNMA1Q12791 1236 aa11.66□□□□□ -0.54
CKS1B-206ENST00000474215 PLK5Q496M5 336 aa11.66□□□□□ -0.54
CKS1B-206ENST00000474215 MPPE1Q53F39 396 aa11.66□□□□□ -0.54
CKS1B-206ENST00000474215 KLHDC7AQ5VTJ3 777 aa11.66□□□□□ -0.54
CKS1B-206ENST00000474215 SASS6Q6UVJ0 657 aa11.66□□□□□ -0.54
CKS1B-206ENST00000474215 BEND5Q7L4P6 421 aa11.66□□□□□ -0.54
CKS1B-206ENST00000474215 UNC45BQ8IWX7 931 aa11.66□□□□□ -0.54
CKS1B-206ENST00000474215 FAM71AQ8IYT1 594 aa11.66□□□□□ -0.54
CKS1B-206ENST00000474215 WDTC1Q8N5D0 677 aa11.66□□□□□ -0.54
CKS1B-206ENST00000474215 MDGA1Q8NFP4 955 aa11.66□□□□□ -0.54
CKS1B-206ENST00000474215 FAM149B1Q96BN6 582 aa11.66□□□□□ -0.54
CKS1B-206ENST00000474215 TMA16Q96EY4 203 aaKnown RBP11.66□□□□□ -0.54
CKS1B-206ENST00000474215 ACOX2Q99424 681 aa11.66□□□□□ -0.54
CKS1B-206ENST00000474215 TRIM62Q9BVG3 475 aa11.66□□□□□ -0.54
CKS1B-206ENST00000474215 SLC2A11Q9BYW1 496 aa11.66□□□□□ -0.54
CKS1B-206ENST00000474215 TPSD1Q9BZJ3 242 aa11.66□□□□□ -0.54
CKS1B-206ENST00000474215 LHX5Q9H2C1 402 aa11.66□□□□□ -0.54
CKS1B-206ENST00000474215 USP18Q9UMW8 372 aa11.66□□□□□ -0.54
CKS1B-206ENST00000474215 PCDHGC3Q9UN70 934 aa11.66□□□□□ -0.54
CKS1B-206ENST00000474215 NAALADL1Q9UQQ1 740 aa11.66□□□□□ -0.54
CKS1B-206ENST00000474215 INVSQ9Y283 1065 aa11.66□□□□□ -0.54
CKS1B-206ENST00000474215 ATG2BQ96BY7 2078 aa11.66□□□□□ -0.54
CKS1B-206ENST00000474215 MYOFQ9NZM1 2061 aa11.65□□□□□ -0.54
CKS1B-206ENST00000474215 TCRBV21S2A2A0A5A6 115 aa11.65□□□□□ -0.54
CKS1B-206ENST00000474215 E5RJQ4 531 aa11.65□□□□□ -0.54
CKS1B-206ENST00000474215 GFRA2O00451 464 aa11.65□□□□□ -0.54
CKS1B-206ENST00000474215 TSPAN3O60637 253 aa11.65□□□□□ -0.54
CKS1B-206ENST00000474215 RHOBTB1O94844 696 aa11.65□□□□□ -0.54
CKS1B-206ENST00000474215 MBD3O95983 291 aa11.65□□□□□ -0.54
CKS1B-206ENST00000474215 HOXB2P14652 356 aa11.65□□□□□ -0.54
CKS1B-206ENST00000474215 KRT9P35527 623 aa11.65□□□□□ -0.54
CKS1B-206ENST00000474215 WASP42768 502 aa11.65□□□□□ -0.54
CKS1B-206ENST00000474215 SLC11A2P49281 568 aa11.65□□□□□ -0.54
CKS1B-206ENST00000474215 TBX4P57082 545 aa11.65□□□□□ -0.54
CKS1B-206ENST00000474215 ZNF445P59923 1031 aa11.65□□□□□ -0.54
CKS1B-206ENST00000474215 YWHAZP63104 245 aaKnown RBP11.65□□□□□ -0.54
CKS1B-206ENST00000474215 LMNB2Q03252 620 aa11.65□□□□□ -0.54
CKS1B-206ENST00000474215 PDCLQ13371 301 aa11.65□□□□□ -0.54
CKS1B-206ENST00000474215 ELF2Q15723 593 aa11.65□□□□□ -0.54
CKS1B-206ENST00000474215 CSRP2Q16527 193 aa11.65□□□□□ -0.54
CKS1B-206ENST00000474215 CDKAL1Q5VV42 579 aa11.65□□□□□ -0.54
CKS1B-206ENST00000474215 SYPL2Q5VXT5 272 aa11.65□□□□□ -0.54
CKS1B-206ENST00000474215 EGFLAMQ63HQ2 1017 aa11.65□□□□□ -0.54
CKS1B-206ENST00000474215 NUGGCQ68CJ6 796 aa11.65□□□□□ -0.54
CKS1B-206ENST00000474215 C11orf74Q86VG3 221 aa11.65□□□□□ -0.54
CKS1B-206ENST00000474215 SLC47A2Q86VL8 602 aa11.65□□□□□ -0.54
CKS1B-206ENST00000474215 CHPFQ8IZ52 775 aa11.65□□□□□ -0.54
CKS1B-206ENST00000474215 OLIG1Q8TAK6 271 aa11.65□□□□□ -0.54
CKS1B-206ENST00000474215 DQX1Q8TE96 717 aaKnown RBP11.65□□□□□ -0.54
CKS1B-206ENST00000474215 AZIN2Q96A70 460 aa11.65□□□□□ -0.54
CKS1B-206ENST00000474215 PIWIL1Q96J94 861 aaKnown RBP11.65□□□□□ -0.54
CKS1B-206ENST00000474215 PPP1R13BQ96KQ4 1090 aa11.65□□□□□ -0.54
CKS1B-206ENST00000474215 IRX2Q9BZI1 471 aaPredicted RBP11.65□□□□□ -0.54
CKS1B-206ENST00000474215 DUSP15Q9H1R2 295 aaPredicted RBP11.65□□□□□ -0.54
CKS1B-206ENST00000474215 SEMA4GQ9NTN9 838 aa11.65□□□□□ -0.54
CKS1B-206ENST00000474215 ANO10Q9NW15 660 aa11.65□□□□□ -0.54
CKS1B-206ENST00000474215 FANCLQ9NW38 375 aa11.65□□□□□ -0.54
CKS1B-206ENST00000474215 TAB2Q9NYJ8 693 aa11.65□□□□□ -0.54
CKS1B-206ENST00000474215 BCCIPQ9P287 314 aaKnown RBP eCLIP11.65□□□□□ -0.54
CKS1B-206ENST00000474215 CLEC4EQ9ULY5 219 aa11.65□□□□□ -0.54
CKS1B-206ENST00000474215 TLR6Q9Y2C9 796 aa11.65□□□□□ -0.54
CKS1B-206ENST00000474215 A0A1W2PQF6 199 aa11.64□□□□□ -0.55
CKS1B-206ENST00000474215 PRR5-ARHGAP8B1AHC4 643 aa11.64□□□□□ -0.55
CKS1B-206ENST00000474215 CAPN9O14815 690 aa11.64□□□□□ -0.55
CKS1B-206ENST00000474215 ZBTB24O43167 697 aaPredicted RBP11.64□□□□□ -0.55
CKS1B-206ENST00000474215 TIMM44O43615 452 aa11.64□□□□□ -0.55
CKS1B-206ENST00000474215 ACSL4O60488 711 aa11.64□□□□□ -0.55
CKS1B-206ENST00000474215 FOXD2O60548 495 aaPredicted RBP11.64□□□□□ -0.55
CKS1B-206ENST00000474215 EPN2O95208 641 aa11.64□□□□□ -0.55
CKS1B-206ENST00000474215 PNMA6AP0CW24 399 aaPredicted RBP11.64□□□□□ -0.55
CKS1B-206ENST00000474215 UCHL3P15374 230 aa11.64□□□□□ -0.55
CKS1B-206ENST00000474215 GBP1P32455 592 aa11.64□□□□□ -0.55
CKS1B-206ENST00000474215 SNX16P57768 344 aa11.64□□□□□ -0.55
CKS1B-206ENST00000474215 ARHGAP8P85298 464 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms