RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 MATN1P21941 496 aa4.73□□□□□ -1.65
BRCA1-212ENST00000473961 GATA3P23771 443 aa4.73□□□□□ -1.65
BRCA1-212ENST00000473961 CHMP24386 653 aa4.73□□□□□ -1.65
BRCA1-212ENST00000473961 ADRA1DP25100 572 aa4.73□□□□□ -1.65
BRCA1-212ENST00000473961 GRK5P34947 590 aa4.73□□□□□ -1.65
BRCA1-212ENST00000473961 PBX1P40424 430 aa4.73□□□□□ -1.65
BRCA1-212ENST00000473961 ARL1P40616 181 aaPredicted RBP4.73□□□□□ -1.65
BRCA1-212ENST00000473961 PAFAH1B1P43034 410 aa4.73□□□□□ -1.65
BRCA1-212ENST00000473961 CASP6P55212 293 aa4.73□□□□□ -1.65
BRCA1-212ENST00000473961 GUCY1B3Q02153 619 aa4.73□□□□□ -1.65
BRCA1-212ENST00000473961 KCNJ12Q14500 433 aa4.73□□□□□ -1.65
BRCA1-212ENST00000473961 KCTD2Q14681 263 aa4.73□□□□□ -1.65
BRCA1-212ENST00000473961 PLAC9Q5JTB6 97 aa4.73□□□□□ -1.65
BRCA1-212ENST00000473961 ANKRD40Q6AI12 368 aa4.73□□□□□ -1.65
BRCA1-212ENST00000473961 ACAD10Q6JQN1 1059 aa4.73□□□□□ -1.65
BRCA1-212ENST00000473961 CFAP161Q6P656 301 aa4.73□□□□□ -1.65
BRCA1-212ENST00000473961 MTHFD1LQ6UB35 978 aa4.73□□□□□ -1.65
BRCA1-212ENST00000473961 Q6ZSN1 163 aa4.73□□□□□ -1.65
BRCA1-212ENST00000473961 PIK3AP1Q6ZUJ8 805 aa4.73□□□□□ -1.65
BRCA1-212ENST00000473961 TBC1D1Q86TI0 1168 aaPredicted RBP4.73□□□□□ -1.65
BRCA1-212ENST00000473961 SIRT6Q8N6T7 355 aa4.73□□□□□ -1.65
BRCA1-212ENST00000473961 PTGR2Q8N8N7 351 aaPredicted RBP4.73□□□□□ -1.65
BRCA1-212ENST00000473961 SLC2A12Q8TD20 617 aa4.73□□□□□ -1.65
BRCA1-212ENST00000473961 XAGE5Q8WWM1 108 aa4.73□□□□□ -1.65
BRCA1-212ENST00000473961 SH3KBP1Q96B97 665 aa4.73□□□□□ -1.65
BRCA1-212ENST00000473961 HAPLN3Q96S86 360 aa4.73□□□□□ -1.65
BRCA1-212ENST00000473961 TREX2Q9BQ50 279 aaPredicted RBP4.73□□□□□ -1.65
BRCA1-212ENST00000473961 PAIP1Q9H074 479 aaKnown RBP4.73□□□□□ -1.65
BRCA1-212ENST00000473961 NRDE2Q9H7Z3 1164 aa4.73□□□□□ -1.65
BRCA1-212ENST00000473961 SYNPO2LQ9H987 977 aa4.73□□□□□ -1.65
BRCA1-212ENST00000473961 KCNK9Q9NPC2 374 aa4.73□□□□□ -1.65
BRCA1-212ENST00000473961 BLOC1S4Q9NUP1 217 aa4.73□□□□□ -1.65
BRCA1-212ENST00000473961 EHD3Q9NZN3 535 aa4.73□□□□□ -1.65
BRCA1-212ENST00000473961 TESQ9UGI8 421 aaKnown RBP4.73□□□□□ -1.65
BRCA1-212ENST00000473961 GDAQ9Y2T3 454 aa4.73□□□□□ -1.65
BRCA1-212ENST00000473961 PCDHB7Q9Y5E2 793 aa4.73□□□□□ -1.65
BRCA1-212ENST00000473961 FAM90A20PA6NIJ5 464 aa4.72□□□□□ -1.65
BRCA1-212ENST00000473961 ZAR1LA6NP61 321 aa4.72□□□□□ -1.65
BRCA1-212ENST00000473961 GRXCR1A8MXD5 290 aa4.72□□□□□ -1.65
BRCA1-212ENST00000473961 AGPSO00116 658 aa4.72□□□□□ -1.65
BRCA1-212ENST00000473961 TSPAN4O14817 238 aa4.72□□□□□ -1.65
BRCA1-212ENST00000473961 ORC4O43929 436 aa4.72□□□□□ -1.65
BRCA1-212ENST00000473961 ZFPL1O95159 310 aa4.72□□□□□ -1.65
BRCA1-212ENST00000473961 CPA1P15085 419 aa4.72□□□□□ -1.65
BRCA1-212ENST00000473961 CREB1P16220 341 aa4.72□□□□□ -1.65
BRCA1-212ENST00000473961 GKP32189 559 aa4.72□□□□□ -1.65
BRCA1-212ENST00000473961 PNPLA4P41247 253 aa4.72□□□□□ -1.65
BRCA1-212ENST00000473961 GPD2P43304 727 aa4.72□□□□□ -1.65
BRCA1-212ENST00000473961 TUBP50607 506 aa4.72□□□□□ -1.65
BRCA1-212ENST00000473961 BLOC1S1P78537 153 aa4.72□□□□□ -1.65
BRCA1-212ENST00000473961 TLE3Q04726 772 aa4.72□□□□□ -1.65
BRCA1-212ENST00000473961 EIF2B5Q13144 721 aaKnown RBP4.72□□□□□ -1.65
BRCA1-212ENST00000473961 PDCLQ13371 301 aa4.72□□□□□ -1.65
BRCA1-212ENST00000473961 TOB2Q14106 344 aaPredicted RBP4.72□□□□□ -1.65
BRCA1-212ENST00000473961 BAK1Q16611 211 aa4.72□□□□□ -1.65
BRCA1-212ENST00000473961 LY6KQ17RY6 165 aa4.72□□□□□ -1.65
BRCA1-212ENST00000473961 AAK1Q2M2I8 961 aa4.72□□□□□ -1.65
BRCA1-212ENST00000473961 NBPF8Q3BBV2 869 aa4.72□□□□□ -1.65
BRCA1-212ENST00000473961 TBC1D25Q3MII6 688 aa4.72□□□□□ -1.65
BRCA1-212ENST00000473961 AASDHQ4L235 1098 aaPredicted RBP4.72□□□□□ -1.65
BRCA1-212ENST00000473961 WDR45BQ5MNZ6 344 aa4.72□□□□□ -1.65
BRCA1-212ENST00000473961 SPATA1Q5VX52 437 aa4.72□□□□□ -1.65
BRCA1-212ENST00000473961 LIPMQ5VYY2 423 aa4.72□□□□□ -1.65
BRCA1-212ENST00000473961 FAM90A2PQ658T7 463 aa4.72□□□□□ -1.65
BRCA1-212ENST00000473961 ITPRIPL1Q6GPH6 555 aa4.72□□□□□ -1.65
BRCA1-212ENST00000473961 WDR93Q6P2C0 686 aa4.72□□□□□ -1.65
BRCA1-212ENST00000473961 BRINP3Q76B58 766 aa4.72□□□□□ -1.65
BRCA1-212ENST00000473961 PDILTQ8N807 584 aa4.72□□□□□ -1.65
BRCA1-212ENST00000473961 FAM71DQ8N9W8 422 aa4.72□□□□□ -1.65
BRCA1-212ENST00000473961 CHST13Q8NET6 341 aa4.72□□□□□ -1.65
BRCA1-212ENST00000473961 TOR1AIP2Q8NFQ8 470 aa4.72□□□□□ -1.65
BRCA1-212ENST00000473961 ADAMTS15Q8TE58 950 aa4.72□□□□□ -1.65
BRCA1-212ENST00000473961 TBC1D22AQ8WUA7 517 aa4.72□□□□□ -1.65
BRCA1-212ENST00000473961 FUBP1Q96AE4 644 aaKnown RBP4.72□□□□□ -1.65
BRCA1-212ENST00000473961 ZUFSPQ96AP4 578 aa4.72□□□□□ -1.65
BRCA1-212ENST00000473961 NACC2Q96BF6 587 aa4.72□□□□□ -1.65
BRCA1-212ENST00000473961 MYEOVQ96EZ4 313 aa4.72□□□□□ -1.65
BRCA1-212ENST00000473961 RBM17Q96I25 401 aaKnown RBP4.72□□□□□ -1.65
BRCA1-212ENST00000473961 PPP1R10Q96QC0 940 aaKnown RBP4.72□□□□□ -1.65
BRCA1-212ENST00000473961 CDK5RAP1Q96SZ6 601 aaKnown RBP4.72□□□□□ -1.65
BRCA1-212ENST00000473961 OSBPL5Q9H0X9 879 aaPredicted RBP4.72□□□□□ -1.65
BRCA1-212ENST00000473961 PLEKHA5Q9HAU0 1116 aa4.72□□□□□ -1.65
BRCA1-212ENST00000473961 ALG13Q9NP73 1137 aaKnown RBP4.72□□□□□ -1.65
BRCA1-212ENST00000473961 KLC4Q9NSK0 619 aa4.72□□□□□ -1.65
BRCA1-212ENST00000473961 AASSQ9UDR5 926 aa4.72□□□□□ -1.65
BRCA1-212ENST00000473961 CNOT7Q9UIV1 285 aaKnown RBP4.72□□□□□ -1.65
BRCA1-212ENST00000473961 MAP3K2Q9Y2U5 619 aa4.72□□□□□ -1.65
BRCA1-212ENST00000473961 FER1L4A9Z1Z3 1794 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 LOC105369274A0A096LPK9 316 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 LOC102723532A0A0G2JNH3 316 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 DYTNA2CJ06 578 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 TCERG1O14776 1098 aaKnown RBP4.71□□□□□ -1.66
BRCA1-212ENST00000473961 NKX2-8O15522 239 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 KLK10O43240 276 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 PROM1O43490 865 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 FZD7O75084 574 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 PMPCBO75439 489 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 ALDOAP04075 364 aaKnown RBP4.71□□□□□ -1.66
BRCA1-212ENST00000473961 FESP07332 822 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 SLC3A2P08195 630 aaKnown RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms