RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 PAPSS2O95340 614 aaPredicted RBP19.73■□□□□ 0.75
PTCD3-210ENST00000473829 PENKP01210 267 aaPredicted RBP19.73■□□□□ 0.75
PTCD3-210ENST00000473829 IGLV3-25P01717 112 aa19.73■□□□□ 0.75
PTCD3-210ENST00000473829 APODP05090 189 aa19.73■□□□□ 0.75
PTCD3-210ENST00000473829 HARS2P49590 506 aaKnown RBP19.73■□□□□ 0.75
PTCD3-210ENST00000473829 TBX4P57082 545 aa19.73■□□□□ 0.75
PTCD3-210ENST00000473829 C2CD6Q53TS8 623 aa19.73■□□□□ 0.75
PTCD3-210ENST00000473829 OR6B2Q6IFH4 312 aa19.73■□□□□ 0.75
PTCD3-210ENST00000473829 CPXM2Q8N436 756 aa19.73■□□□□ 0.75
PTCD3-210ENST00000473829 IPO4Q8TEX9 1081 aaKnown RBP19.73■□□□□ 0.75
PTCD3-210ENST00000473829 USP33Q8TEY7 942 aa19.73■□□□□ 0.75
PTCD3-210ENST00000473829 FCRL2Q96LA5 508 aaPredicted RBP19.73■□□□□ 0.75
PTCD3-210ENST00000473829 SLC2A13Q96QE2 648 aa19.73■□□□□ 0.75
PTCD3-210ENST00000473829 WDR35Q9P2L0 1181 aa19.73■□□□□ 0.75
PTCD3-210ENST00000473829 DEC1Q9P2X7 70 aa19.73■□□□□ 0.75
PTCD3-210ENST00000473829 STOML2Q9UJZ1 356 aa19.73■□□□□ 0.75
PTCD3-210ENST00000473829 A0A0A0MRY4 1105 aa19.72■□□□□ 0.75
PTCD3-210ENST00000473829 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.72■□□□□ 0.75
PTCD3-210ENST00000473829 PROB1E7EW31 1015 aa19.72■□□□□ 0.75
PTCD3-210ENST00000473829 GFRA2O00451 464 aa19.72■□□□□ 0.75
PTCD3-210ENST00000473829 CAPN9O14815 690 aa19.72■□□□□ 0.75
PTCD3-210ENST00000473829 LSM8O95777 96 aaKnown RBP19.72■□□□□ 0.75
PTCD3-210ENST00000473829 CHKAP35790 457 aa19.72■□□□□ 0.75
PTCD3-210ENST00000473829 CDR2Q01850 454 aa19.72■□□□□ 0.75
PTCD3-210ENST00000473829 RING1Q06587 406 aa19.72■□□□□ 0.75
PTCD3-210ENST00000473829 NFKBIBQ15653 356 aa19.72■□□□□ 0.75
PTCD3-210ENST00000473829 EMC10Q5UCC4 262 aa19.72■□□□□ 0.75
PTCD3-210ENST00000473829 NAA35Q5VZE5 725 aa19.72■□□□□ 0.75
PTCD3-210ENST00000473829 TOGARAM2Q6ZUX3 1019 aa19.72■□□□□ 0.75
PTCD3-210ENST00000473829 ZNF677Q86XU0 584 aa19.72■□□□□ 0.75
PTCD3-210ENST00000473829 DEFB106AQ8N104 65 aa19.72■□□□□ 0.75
PTCD3-210ENST00000473829 TERB1Q8NA31 727 aa19.72■□□□□ 0.75
PTCD3-210ENST00000473829 CPA5Q8WXQ8 436 aa19.72■□□□□ 0.75
PTCD3-210ENST00000473829 BAP1Q92560 729 aa19.72■□□□□ 0.75
PTCD3-210ENST00000473829 SLC39A13Q96H72 371 aa19.72■□□□□ 0.75
PTCD3-210ENST00000473829 SERPINB11Q96P15 392 aa19.72■□□□□ 0.75
PTCD3-210ENST00000473829 TRIM62Q9BVG3 475 aa19.72■□□□□ 0.75
PTCD3-210ENST00000473829 SYNCQ9H7C4 482 aa19.72■□□□□ 0.75
PTCD3-210ENST00000473829 ZDHHC4Q9NPG8 344 aa19.72■□□□□ 0.75
PTCD3-210ENST00000473829 ASNSD1Q9NWL6 643 aa19.72■□□□□ 0.75
PTCD3-210ENST00000473829 IRAK2O43187 625 aa19.71■□□□□ 0.75
PTCD3-210ENST00000473829 HSF2BPO75031 334 aa19.71■□□□□ 0.75
PTCD3-210ENST00000473829 SERPINC1P01008 464 aa19.71■□□□□ 0.75
PTCD3-210ENST00000473829 CYP1A1P04798 512 aaPredicted RBP19.71■□□□□ 0.75
PTCD3-210ENST00000473829 GLI1P08151 1106 aa19.71■□□□□ 0.75
PTCD3-210ENST00000473829 CISD3P0C7P0 127 aa19.71■□□□□ 0.75
PTCD3-210ENST00000473829 GRIA2P42262 883 aa19.71■□□□□ 0.75
PTCD3-210ENST00000473829 KIR2DL1P43626 348 aaPredicted RBP19.71■□□□□ 0.75
PTCD3-210ENST00000473829 GABRB2P47870 512 aa19.71■□□□□ 0.75
PTCD3-210ENST00000473829 SGSHP51688 502 aa19.71■□□□□ 0.75
PTCD3-210ENST00000473829 FANCCQ00597 558 aa19.71■□□□□ 0.75
PTCD3-210ENST00000473829 SLC6A3Q01959 620 aa19.71■□□□□ 0.75
PTCD3-210ENST00000473829 ARID5AQ03989 594 aa19.71■□□□□ 0.75
PTCD3-210ENST00000473829 NNTQ13423 1086 aa19.71■□□□□ 0.75
PTCD3-210ENST00000473829 EIF4EBP2Q13542 120 aaPredicted RBP19.71■□□□□ 0.75
PTCD3-210ENST00000473829 FILIP1LQ4L180 1135 aa19.71■□□□□ 0.75
PTCD3-210ENST00000473829 C2orf27AQ580R0 203 aa19.71■□□□□ 0.75
PTCD3-210ENST00000473829 DCAF6Q58WW2 860 aa19.71■□□□□ 0.75
PTCD3-210ENST00000473829 EFHC1Q5JVL4 640 aa19.71■□□□□ 0.75
PTCD3-210ENST00000473829 NADSYN1Q6IA69 706 aa19.71■□□□□ 0.75
PTCD3-210ENST00000473829 GRAMD4Q6IC98 578 aa19.71■□□□□ 0.75
PTCD3-210ENST00000473829 SLC26A9Q7LBE3 791 aa19.71■□□□□ 0.75
PTCD3-210ENST00000473829 XYLT1Q86Y38 959 aa19.71■□□□□ 0.75
PTCD3-210ENST00000473829 ZBTB44Q8NCP5 570 aa19.71■□□□□ 0.75
PTCD3-210ENST00000473829 PCDHB18PQ96TA0 734 aa19.71■□□□□ 0.75
PTCD3-210ENST00000473829 FBXO10Q9UK96 956 aa19.71■□□□□ 0.75
PTCD3-210ENST00000473829 HCN2Q9UL51 889 aa19.71■□□□□ 0.75
PTCD3-210ENST00000473829 CLEC4EQ9ULY5 219 aa19.71■□□□□ 0.75
PTCD3-210ENST00000473829 TLR6Q9Y2C9 796 aa19.71■□□□□ 0.75
PTCD3-210ENST00000473829 GOLGA6L7A0A1B0GV03 622 aa19.7■□□□□ 0.74
PTCD3-210ENST00000473829 A0A1W2PQC6 194 aa19.7■□□□□ 0.74
PTCD3-210ENST00000473829 TSPAN3O60637 253 aa19.7■□□□□ 0.74
PTCD3-210ENST00000473829 DAB1O75553 588 aa19.7■□□□□ 0.74
PTCD3-210ENST00000473829 LATS1O95835 1130 aa19.7■□□□□ 0.74
PTCD3-210ENST00000473829 TRUB2O95900 331 aaKnown RBP19.7■□□□□ 0.74
PTCD3-210ENST00000473829 SLC6A4P31645 630 aa19.7■□□□□ 0.74
PTCD3-210ENST00000473829 NR1I3Q14994 352 aa19.7■□□□□ 0.74
PTCD3-210ENST00000473829 FAM133BQ5BKY9 247 aaKnown RBP19.7■□□□□ 0.74
PTCD3-210ENST00000473829 OTUD1Q5VV17 481 aaPredicted RBP19.7■□□□□ 0.74
PTCD3-210ENST00000473829 NUGGCQ68CJ6 796 aa19.7■□□□□ 0.74
PTCD3-210ENST00000473829 CACNA2D4Q7Z3S7 1137 aa19.7■□□□□ 0.74
PTCD3-210ENST00000473829 ERICH1Q86X53 443 aa19.7■□□□□ 0.74
PTCD3-210ENST00000473829 MYEOVQ96EZ4 313 aa19.7■□□□□ 0.74
PTCD3-210ENST00000473829 XPO6Q96QU8 1125 aaKnown RBP19.7■□□□□ 0.74
PTCD3-210ENST00000473829 ADAM33Q9BZ11 813 aa19.7■□□□□ 0.74
PTCD3-210ENST00000473829 ZSCAN32Q9NX65 697 aa19.7■□□□□ 0.74
PTCD3-210ENST00000473829 XPO7Q9UIA9 1087 aaKnown RBP19.7■□□□□ 0.74
PTCD3-210ENST00000473829 EML5Q05BV3 1969 aa19.7■□□□□ 0.74
PTCD3-210ENST00000473829 TBC1D3BA6NDS4 549 aa19.69■□□□□ 0.74
PTCD3-210ENST00000473829 PRRT4C9JH25 899 aa19.69■□□□□ 0.74
PTCD3-210ENST00000473829 LILRB5O75023 590 aa19.69■□□□□ 0.74
PTCD3-210ENST00000473829 ATG13O75143 517 aa19.69■□□□□ 0.74
PTCD3-210ENST00000473829 CAVIN2O95810 425 aa19.69■□□□□ 0.74
PTCD3-210ENST00000473829 HOXD9P28356 352 aaPredicted RBP19.69■□□□□ 0.74
PTCD3-210ENST00000473829 TIE1P35590 1138 aa19.69■□□□□ 0.74
PTCD3-210ENST00000473829 TNFRSF4P43489 277 aa19.69■□□□□ 0.74
PTCD3-210ENST00000473829 PXNP49023 591 aaPredicted RBP19.69■□□□□ 0.74
PTCD3-210ENST00000473829 FNTBP49356 437 aa19.69■□□□□ 0.74
PTCD3-210ENST00000473829 DGKGP49619 791 aa19.69■□□□□ 0.74
PTCD3-210ENST00000473829 MRE11P49959 708 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms