RNA–Protein interactions for RNA: ENST00000473643.1

SMG5-203, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-203ENST00000473643 CDC25CP30307 473 aa9.49□□□□□ -0.89
SMG5-203ENST00000473643 PTPN9P43378 593 aa9.49□□□□□ -0.89
SMG5-203ENST00000473643 ZNF143P52747 638 aaPredicted RBP9.49□□□□□ -0.89
SMG5-203ENST00000473643 OGDHQ02218 1023 aa9.49□□□□□ -0.89
SMG5-203ENST00000473643 IFRD2Q12894 506 aaPredicted RBP9.49□□□□□ -0.89
SMG5-203ENST00000473643 PIGHQ14442 188 aaPredicted RBP9.49□□□□□ -0.89
SMG5-203ENST00000473643 IFI16Q16666 785 aaKnown RBP9.49□□□□□ -0.89
SMG5-203ENST00000473643 SLC25A52Q3SY17 297 aa9.49□□□□□ -0.89
SMG5-203ENST00000473643 CCDC14Q49A88 953 aa9.49□□□□□ -0.89
SMG5-203ENST00000473643 ARHGAP29Q52LW3 1261 aa9.49□□□□□ -0.89
SMG5-203ENST00000473643 STXBP5Q5T5C0 1151 aa9.49□□□□□ -0.89
SMG5-203ENST00000473643 SYPL2Q5VXT5 272 aa9.49□□□□□ -0.89
SMG5-203ENST00000473643 BTBD8Q5XKL5 378 aa9.49□□□□□ -0.89
SMG5-203ENST00000473643 MSANTD2Q6P1R3 559 aa9.49□□□□□ -0.89
SMG5-203ENST00000473643 VITQ6UXI7 678 aa9.49□□□□□ -0.89
SMG5-203ENST00000473643 SLFN11Q7Z7L1 901 aa9.49□□□□□ -0.89
SMG5-203ENST00000473643 ARID3BQ8IVW6 561 aaPredicted RBP9.49□□□□□ -0.89
SMG5-203ENST00000473643 MFSD6LQ8IWD5 586 aa9.49□□□□□ -0.89
SMG5-203ENST00000473643 CCDC105Q8IYK2 499 aa9.49□□□□□ -0.89
SMG5-203ENST00000473643 NIPA2Q8N8Q9 360 aa9.49□□□□□ -0.89
SMG5-203ENST00000473643 DTWD2Q8NBA8 298 aa9.49□□□□□ -0.89
SMG5-203ENST00000473643 TPCN2Q8NHX9 752 aa9.49□□□□□ -0.89
SMG5-203ENST00000473643 RXFP2Q8WXD0 754 aa9.49□□□□□ -0.89
SMG5-203ENST00000473643 CENPIQ92674 756 aaPredicted RBP9.49□□□□□ -0.89
SMG5-203ENST00000473643 DNASE1L2Q92874 299 aa9.49□□□□□ -0.89
SMG5-203ENST00000473643 FAM149B1Q96BN6 582 aa9.49□□□□□ -0.89
SMG5-203ENST00000473643 RSPRY1Q96DX4 576 aa9.49□□□□□ -0.89
SMG5-203ENST00000473643 PGAP3Q96FM1 320 aaPredicted RBP9.49□□□□□ -0.89
SMG5-203ENST00000473643 LRRC3BQ96PB8 259 aa9.49□□□□□ -0.89
SMG5-203ENST00000473643 MCEEQ96PE7 176 aa9.49□□□□□ -0.89
SMG5-203ENST00000473643 CDK5RAP1Q96SZ6 601 aaKnown RBP9.49□□□□□ -0.89
SMG5-203ENST00000473643 NPY6RQ99463 290 aa9.49□□□□□ -0.89
SMG5-203ENST00000473643 CNPY3Q9BT09 278 aa9.49□□□□□ -0.89
SMG5-203ENST00000473643 TRMT61BQ9BVS5 477 aaKnown RBP9.49□□□□□ -0.89
SMG5-203ENST00000473643 SLC46A2Q9BY10 475 aa9.49□□□□□ -0.89
SMG5-203ENST00000473643 OSBPL6Q9BZF3 934 aa9.49□□□□□ -0.89
SMG5-203ENST00000473643 ATXN3LQ9H3M9 355 aa9.49□□□□□ -0.89
SMG5-203ENST00000473643 TASP1Q9H6P5 420 aa9.49□□□□□ -0.89
SMG5-203ENST00000473643 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.49□□□□□ -0.89
SMG5-203ENST00000473643 TRIM10Q9UDY6 481 aa9.49□□□□□ -0.89
SMG5-203ENST00000473643 IP6K2Q9UHH9 426 aa9.49□□□□□ -0.89
SMG5-203ENST00000473643 ZMYM5Q9UJ78 669 aa9.49□□□□□ -0.89
SMG5-203ENST00000473643 NAALADL1Q9UQQ1 740 aa9.49□□□□□ -0.89
SMG5-203ENST00000473643 USP27XA6NNY8 438 aa9.48□□□□□ -0.89
SMG5-203ENST00000473643 HEPACAM2A8MVW5 462 aa9.48□□□□□ -0.89
SMG5-203ENST00000473643 H0Y858 1186 aa9.48□□□□□ -0.89
SMG5-203ENST00000473643 ARNTLO00327 626 aa9.48□□□□□ -0.89
SMG5-203ENST00000473643 CAPN9O14815 690 aa9.48□□□□□ -0.89
SMG5-203ENST00000473643 GRAP2O75791 330 aa9.48□□□□□ -0.89
SMG5-203ENST00000473643 PROSCO94903 275 aa9.48□□□□□ -0.89
SMG5-203ENST00000473643 OAS1P00973 400 aaKnown RBP9.48□□□□□ -0.89
SMG5-203ENST00000473643 IGLV3-25P01717 112 aa9.48□□□□□ -0.89
SMG5-203ENST00000473643 NCAM1P13591 858 aa9.48□□□□□ -0.89
SMG5-203ENST00000473643 RARGP13631 454 aa9.48□□□□□ -0.89
SMG5-203ENST00000473643 PDGFRAP16234 1089 aa9.48□□□□□ -0.89
SMG5-203ENST00000473643 DDX6P26196 483 aaKnown RBP eCLIP9.48□□□□□ -0.89
SMG5-203ENST00000473643 SDC4P31431 198 aa9.48□□□□□ -0.89
SMG5-203ENST00000473643 MAN1A1P33908 653 aa9.48□□□□□ -0.89
SMG5-203ENST00000473643 SLC1A1P43005 524 aa9.48□□□□□ -0.89
SMG5-203ENST00000473643 NOP2P46087 812 aaKnown RBP9.48□□□□□ -0.89
SMG5-203ENST00000473643 MLLT6P55198 1093 aaPredicted RBP9.48□□□□□ -0.89
SMG5-203ENST00000473643 RNASE9P60153 205 aaKnown RBP9.48□□□□□ -0.89
SMG5-203ENST00000473643 ZNF252P-AS1Q0IIN9 211 aa9.48□□□□□ -0.89
SMG5-203ENST00000473643 FCHO2Q0JRZ9 810 aa9.48□□□□□ -0.89
SMG5-203ENST00000473643 MLF2Q15773 248 aaPredicted RBP9.48□□□□□ -0.89
SMG5-203ENST00000473643 DCAF6Q58WW2 860 aa9.48□□□□□ -0.89
SMG5-203ENST00000473643 HECTD3Q5T447 861 aa9.48□□□□□ -0.89
SMG5-203ENST00000473643 GPR158Q5T848 1215 aa9.48□□□□□ -0.89
SMG5-203ENST00000473643 STRADAQ7RTN6 431 aa9.48□□□□□ -0.89
SMG5-203ENST00000473643 TADA2BQ86TJ2 420 aa9.48□□□□□ -0.89
SMG5-203ENST00000473643 ZSCAN30Q86W11 494 aa9.48□□□□□ -0.89
SMG5-203ENST00000473643 ZNF687Q8N1G0 1237 aa9.48□□□□□ -0.89
SMG5-203ENST00000473643 EMC1Q8N766 993 aa9.48□□□□□ -0.89
SMG5-203ENST00000473643 PJA1Q8NG27 643 aa9.48□□□□□ -0.89
SMG5-203ENST00000473643 DEPDC1BQ8WUY9 529 aa9.48□□□□□ -0.89
SMG5-203ENST00000473643 MRPS31Q92665 395 aaKnown RBP9.48□□□□□ -0.89
SMG5-203ENST00000473643 IRF7Q92985 503 aa9.48□□□□□ -0.89
SMG5-203ENST00000473643 NELL2Q99435 816 aa9.48□□□□□ -0.89
SMG5-203ENST00000473643 NCAPGQ9BPX3 1015 aa9.48□□□□□ -0.89
SMG5-203ENST00000473643 FOXQ1Q9C009 403 aa9.48□□□□□ -0.89
SMG5-203ENST00000473643 TRIM7Q9C029 511 aa9.48□□□□□ -0.89
SMG5-203ENST00000473643 BRD9Q9H8M2 597 aa9.48□□□□□ -0.89
SMG5-203ENST00000473643 LZTFL1Q9NQ48 299 aa9.48□□□□□ -0.89
SMG5-203ENST00000473643 OLA1Q9NTK5 396 aaKnown RBP9.48□□□□□ -0.89
SMG5-203ENST00000473643 TRMT1Q9NXH9 659 aaKnown RBP9.48□□□□□ -0.89
SMG5-203ENST00000473643 OBP2AQ9NY56 170 aa9.48□□□□□ -0.89
SMG5-203ENST00000473643 ANAPC7Q9UJX3 599 aa9.48□□□□□ -0.89
SMG5-203ENST00000473643 STAP1Q9ULZ2 295 aa9.48□□□□□ -0.89
SMG5-203ENST00000473643 GUCA1BQ9UMX6 200 aa9.48□□□□□ -0.89
SMG5-203ENST00000473643 PAXBP1Q9Y5B6 917 aa9.48□□□□□ -0.89
SMG5-203ENST00000473643 RIF1Q5UIP0 2472 aaKnown RBP9.48□□□□□ -0.89
SMG5-203ENST00000473643 WDR87Q6ZQQ6 2873 aa9.47□□□□□ -0.89
SMG5-203ENST00000473643 MACROD2A1Z1Q3 448 aa9.47□□□□□ -0.89
SMG5-203ENST00000473643 BUB1O43683 1085 aa9.47□□□□□ -0.89
SMG5-203ENST00000473643 BUB1BO60566 1050 aaPredicted RBP9.47□□□□□ -0.89
SMG5-203ENST00000473643 TLR5O60602 858 aa9.47□□□□□ -0.89
SMG5-203ENST00000473643 F9P00740 461 aa9.47□□□□□ -0.89
SMG5-203ENST00000473643 DCNP07585 359 aaKnown RBP9.47□□□□□ -0.89
SMG5-203ENST00000473643 GLULP15104 373 aa9.47□□□□□ -0.89
SMG5-203ENST00000473643 PSMA2P25787 234 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms