RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 NCOA4Q13772 614 aa7.29□□□□□ -1.24
CKS1B-205ENST00000473344 SLC39A14Q15043 492 aa7.29□□□□□ -1.24
CKS1B-205ENST00000473344 STK38Q15208 465 aa7.29□□□□□ -1.24
CKS1B-205ENST00000473344 E2F5Q15329 346 aa7.29□□□□□ -1.24
CKS1B-205ENST00000473344 IL27RAQ6UWB1 636 aa7.29□□□□□ -1.24
CKS1B-205ENST00000473344 TOGARAM2Q6ZUX3 1019 aa7.29□□□□□ -1.24
CKS1B-205ENST00000473344 TADA2BQ86TJ2 420 aa7.29□□□□□ -1.24
CKS1B-205ENST00000473344 ACOT1Q86TX2 421 aa7.29□□□□□ -1.24
CKS1B-205ENST00000473344 IQUBQ8NA54 791 aa7.29□□□□□ -1.24
CKS1B-205ENST00000473344 SLC2A14Q8TDB8 520 aa7.29□□□□□ -1.24
CKS1B-205ENST00000473344 DHX58Q96C10 678 aa7.29□□□□□ -1.24
CKS1B-205ENST00000473344 TOE1Q96GM8 510 aaKnown RBP7.29□□□□□ -1.24
CKS1B-205ENST00000473344 GABRG3Q99928 467 aa7.29□□□□□ -1.24
CKS1B-205ENST00000473344 TRIM9Q9C026 710 aa7.29□□□□□ -1.24
CKS1B-205ENST00000473344 DNAI2Q9GZS0 605 aa7.29□□□□□ -1.24
CKS1B-205ENST00000473344 XYLT2Q9H1B5 865 aa7.29□□□□□ -1.24
CKS1B-205ENST00000473344 SLC6A17Q9H1V8 727 aa7.29□□□□□ -1.24
CKS1B-205ENST00000473344 SMYD3Q9H7B4 428 aa7.29□□□□□ -1.24
CKS1B-205ENST00000473344 PRDM16Q9HAZ2 1276 aa7.29□□□□□ -1.24
CKS1B-205ENST00000473344 KBTBD4Q9NVX7 518 aa7.29□□□□□ -1.24
CKS1B-205ENST00000473344 TMEM51Q9NW97 253 aa7.29□□□□□ -1.24
CKS1B-205ENST00000473344 GMPR2Q9P2T1 348 aaKnown RBP7.29□□□□□ -1.24
CKS1B-205ENST00000473344 GPSM3Q9Y4H4 160 aa7.29□□□□□ -1.24
CKS1B-205ENST00000473344 MYO16Q9Y6X6 1858 aa7.29□□□□□ -1.24
CKS1B-205ENST00000473344 SDK1Q7Z5N4 2213 aa7.29□□□□□ -1.24
CKS1B-205ENST00000473344 THADAQ6YHU6 1953 aa7.29□□□□□ -1.24
CKS1B-205ENST00000473344 HELZP42694 1942 aaKnown RBP7.29□□□□□ -1.24
CKS1B-205ENST00000473344 CNOT1A5YKK6 2376 aaKnown RBP7.28□□□□□ -1.24
CKS1B-205ENST00000473344 UBE4BO95155 1302 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 FAM208BQ5VWN6 2430 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 ATG2BQ96BY7 2078 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 BAHCC1Q9P281 2608 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 FAM92AA1XBS5 289 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 WASH3PC4AMC7 463 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 TAF4O00268 1085 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 NPC1O15118 1278 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 CER1O95813 267 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 CYBBP04839 570 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 ZDHHC11BP0C7U3 371 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 FAM200BP0CF97 657 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 CCDC130P13994 396 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 ACO1P21399 889 aaKnown RBP7.28□□□□□ -1.24
CKS1B-205ENST00000473344 SYT1P21579 422 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 OXTRP30559 389 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 HOXD13P35453 343 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 CHKAP35790 457 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 MATKP42679 507 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 PLA2G4AP47712 749 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 CASP4P49662 377 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 ORC1Q13415 861 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 SGSM1Q2NKQ1 1148 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 COL28A1Q2UY09 1125 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 FUT11Q495W5 492 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 C10orf120Q5SQS8 335 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 CCNI2Q6ZMN8 369 aaPredicted RBP7.28□□□□□ -1.24
CKS1B-205ENST00000473344 PAQR9Q6ZVX9 377 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 EPM2AIP1Q7L775 607 aaPredicted RBP7.28□□□□□ -1.24
CKS1B-205ENST00000473344 PDZD3Q86UT5 571 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 FUKQ8N0W3 1084 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 ZCCHC9Q8N567 271 aaKnown RBP7.28□□□□□ -1.24
CKS1B-205ENST00000473344 CADM4Q8NFZ8 388 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 GOLGA5Q8TBA6 731 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 MDM1Q8TC05 714 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 UCMAQ8WVF2 138 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 PRCCQ92733 491 aaPredicted RBP7.28□□□□□ -1.24
CKS1B-205ENST00000473344 WBP2Q969T9 261 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 JAKMIP2Q96AA8 810 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 USP28Q96RU2 1077 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 GPR174Q9BXC1 333 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 KLF16Q9BXK1 252 aaPredicted RBP7.28□□□□□ -1.24
CKS1B-205ENST00000473344 ZSCAN16Q9H4T2 348 aaPredicted RBP7.28□□□□□ -1.24
CKS1B-205ENST00000473344 GAREM1Q9H706 876 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 VRTNQ9H8Y1 702 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 CSNK1G1Q9HCP0 422 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 CD93Q9NPY3 652 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 CYLDQ9NQC7 956 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 TM7SF3Q9NS93 570 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 FAM49BQ9NUQ9 324 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 PLK2Q9NYY3 685 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 IL37Q9NZH6 218 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 MARK1Q9P0L2 795 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 TFIP11Q9UBB9 837 aaKnown RBP7.28□□□□□ -1.24
CKS1B-205ENST00000473344 DNMT3LQ9UJW3 386 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 NAGPAQ9UK23 515 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 PCOLCE2Q9UKZ9 415 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 HCN2Q9UL51 889 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 NFE2L3Q9Y4A8 694 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 STON1Q9Y6Q2 735 aa7.28□□□□□ -1.24
CKS1B-205ENST00000473344 NUP205Q92621 2012 aa7.27□□□□□ -1.25
CKS1B-205ENST00000473344 BCAT2O15382 392 aaPredicted RBP7.27□□□□□ -1.25
CKS1B-205ENST00000473344 CYP26A1O43174 497 aa7.27□□□□□ -1.25
CKS1B-205ENST00000473344 STX6O43752 255 aa7.27□□□□□ -1.25
CKS1B-205ENST00000473344 GJB3O75712 270 aa7.27□□□□□ -1.25
CKS1B-205ENST00000473344 BEST1O76090 585 aa7.27□□□□□ -1.25
CKS1B-205ENST00000473344 RALAP11233 206 aa7.27□□□□□ -1.25
CKS1B-205ENST00000473344 RARGP13631 454 aa7.27□□□□□ -1.25
CKS1B-205ENST00000473344 ADORA2BP29275 332 aa7.27□□□□□ -1.25
CKS1B-205ENST00000473344 PGFP49763 221 aa7.27□□□□□ -1.25
CKS1B-205ENST00000473344 MMP16P51512 607 aa7.27□□□□□ -1.25
CKS1B-205ENST00000473344 TPMTP51580 245 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms