RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 SLC12A8A0AV02 714 aa11.76□□□□□ -0.53
ACTB-209ENST00000473257 GOLGA8CPA6NN73 597 aa11.76□□□□□ -0.53
ACTB-209ENST00000473257 FTH1P19P0C7X4 201 aa11.76□□□□□ -0.53
ACTB-209ENST00000473257 TPMTP51580 245 aa11.76□□□□□ -0.53
ACTB-209ENST00000473257 NDUFA8P51970 172 aa11.76□□□□□ -0.53
ACTB-209ENST00000473257 GOLGA8FQ08AF8 430 aa11.76□□□□□ -0.53
ACTB-209ENST00000473257 GOLGA8DPQ0D2H9 430 aa11.76□□□□□ -0.53
ACTB-209ENST00000473257 ZNF234Q14588 700 aa11.76□□□□□ -0.53
ACTB-209ENST00000473257 CCDC186Q7Z3E2 898 aa11.76□□□□□ -0.53
ACTB-209ENST00000473257 SLCO6A1Q86UG4 719 aa11.76□□□□□ -0.53
ACTB-209ENST00000473257 TMPRSS6Q8IU80 811 aa11.76□□□□□ -0.53
ACTB-209ENST00000473257 FAM186BQ8IYM0 893 aa11.76□□□□□ -0.53
ACTB-209ENST00000473257 SLC4A11Q8NBS3 891 aa11.76□□□□□ -0.53
ACTB-209ENST00000473257 CYB5D2Q8WUJ1 264 aa11.76□□□□□ -0.53
ACTB-209ENST00000473257 TATDN2Q93075 761 aa11.76□□□□□ -0.53
ACTB-209ENST00000473257 PIWIL1Q96J94 861 aaKnown RBP11.76□□□□□ -0.53
ACTB-209ENST00000473257 WSB2Q9NYS7 404 aaPredicted RBP11.76□□□□□ -0.53
ACTB-209ENST00000473257 USP36Q9P275 1121 aaKnown RBP11.76□□□□□ -0.53
ACTB-209ENST00000473257 THAP10Q9P2Z0 257 aaPredicted RBP11.76□□□□□ -0.53
ACTB-209ENST00000473257 FNDC3AQ9Y2H6 1198 aaKnown RBP11.76□□□□□ -0.53
ACTB-209ENST00000473257 USP3Q9Y6I4 520 aa11.76□□□□□ -0.53
ACTB-209ENST00000473257 GOLGA4Q13439 2230 aaKnown RBP11.76□□□□□ -0.53
ACTB-209ENST00000473257 A0A1B0GVT2 93 aa11.75□□□□□ -0.53
ACTB-209ENST00000473257 TMEM8BA6NDV4 472 aa11.75□□□□□ -0.53
ACTB-209ENST00000473257 KCNK3O14649 394 aa11.75□□□□□ -0.53
ACTB-209ENST00000473257 IKBKBO14920 756 aa11.75□□□□□ -0.53
ACTB-209ENST00000473257 CALUO43852 315 aaPredicted RBP11.75□□□□□ -0.53
ACTB-209ENST00000473257 CALCAP01258 141 aa11.75□□□□□ -0.53
ACTB-209ENST00000473257 CAPNS1P04632 268 aa11.75□□□□□ -0.53
ACTB-209ENST00000473257 HSP90AA1P07900 732 aaKnown RBP11.75□□□□□ -0.53
ACTB-209ENST00000473257 SYPP08247 313 aa11.75□□□□□ -0.53
ACTB-209ENST00000473257 RALAP11233 206 aa11.75□□□□□ -0.53
ACTB-209ENST00000473257 DPP6P42658 865 aa11.75□□□□□ -0.53
ACTB-209ENST00000473257 SGSHP51688 502 aa11.75□□□□□ -0.53
ACTB-209ENST00000473257 COPAP53621 1224 aa11.75□□□□□ -0.53
ACTB-209ENST00000473257 RAD23BP54727 409 aa11.75□□□□□ -0.53
ACTB-209ENST00000473257 SCAPQ12770 1279 aa11.75□□□□□ -0.53
ACTB-209ENST00000473257 STARD3Q14849 445 aa11.75□□□□□ -0.53
ACTB-209ENST00000473257 SYCP2LQ5T4T6 812 aa11.75□□□□□ -0.53
ACTB-209ENST00000473257 DCAF12L1Q5VU92 463 aa11.75□□□□□ -0.53
ACTB-209ENST00000473257 KLHDC10Q6PID8 442 aa11.75□□□□□ -0.53
ACTB-209ENST00000473257 RSRC2Q7L4I2 434 aaKnown RBP11.75□□□□□ -0.53
ACTB-209ENST00000473257 BHLHA9Q7RTU4 235 aa11.75□□□□□ -0.53
ACTB-209ENST00000473257 PIGZQ86VD9 579 aa11.75□□□□□ -0.53
ACTB-209ENST00000473257 RBBP8NLQ8NC74 664 aaPredicted RBP11.75□□□□□ -0.53
ACTB-209ENST00000473257 SETD7Q8WTS6 366 aaKnown RBP11.75□□□□□ -0.53
ACTB-209ENST00000473257 SNX19Q92543 992 aa11.75□□□□□ -0.53
ACTB-209ENST00000473257 EDEM1Q92611 657 aa11.75□□□□□ -0.53
ACTB-209ENST00000473257 SIPA1Q96FS4 1042 aa11.75□□□□□ -0.53
ACTB-209ENST00000473257 ULBP1Q9BZM6 244 aa11.75□□□□□ -0.53
ACTB-209ENST00000473257 GOLPH3LQ9H4A5 285 aa11.75□□□□□ -0.53
ACTB-209ENST00000473257 MTG2Q9H4K7 406 aa11.75□□□□□ -0.53
ACTB-209ENST00000473257 CYP3A43Q9HB55 503 aa11.75□□□□□ -0.53
ACTB-209ENST00000473257 ITM2CQ9NQX7 267 aa11.75□□□□□ -0.53
ACTB-209ENST00000473257 CISHQ9NSE2 258 aa11.75□□□□□ -0.53
ACTB-209ENST00000473257 ELOVL2Q9NXB9 296 aa11.75□□□□□ -0.53
ACTB-209ENST00000473257 MARCH2Q9P0N8 246 aa11.75□□□□□ -0.53
ACTB-209ENST00000473257 EIF2B4Q9UI10 523 aaKnown RBP11.75□□□□□ -0.53
ACTB-209ENST00000473257 TRAF3IP3Q9Y228 551 aa11.75□□□□□ -0.53
ACTB-209ENST00000473257 HPSEQ9Y251 543 aa11.75□□□□□ -0.53
ACTB-209ENST00000473257 SLC27A6Q9Y2P4 619 aa11.75□□□□□ -0.53
ACTB-209ENST00000473257 PLXNB3Q9ULL4 1909 aa11.74□□□□□ -0.53
ACTB-209ENST00000473257 GFRA2O00451 464 aa11.74□□□□□ -0.53
ACTB-209ENST00000473257 PIK3R2O00459 728 aa11.74□□□□□ -0.53
ACTB-209ENST00000473257 MSI1O43347 362 aaKnown RBP11.74□□□□□ -0.53
ACTB-209ENST00000473257 SYNCRIPO60506 623 aaKnown RBP11.74□□□□□ -0.53
ACTB-209ENST00000473257 EPHX1P07099 455 aa11.74□□□□□ -0.53
ACTB-209ENST00000473257 CSNK1EP49674 416 aaKnown RBP11.74□□□□□ -0.53
ACTB-209ENST00000473257 TKTL1P51854 596 aa11.74□□□□□ -0.53
ACTB-209ENST00000473257 YWHAGP61981 247 aaKnown RBP eCLIP11.74□□□□□ -0.531e-10■□□□□ 9.7
ACTB-209ENST00000473257 GOLGA7BQ2TAP0 167 aa11.74□□□□□ -0.53
ACTB-209ENST00000473257 WDR45BQ5MNZ6 344 aa11.74□□□□□ -0.53
ACTB-209ENST00000473257 LRSAM1Q6UWE0 723 aa11.74□□□□□ -0.53
ACTB-209ENST00000473257 ZC3H3Q8IXZ2 948 aaKnown RBP11.74□□□□□ -0.53
ACTB-209ENST00000473257 UBA3Q8TBC4 463 aa11.74□□□□□ -0.53
ACTB-209ENST00000473257 MDM1Q8TC05 714 aa11.74□□□□□ -0.53
ACTB-209ENST00000473257 DDI1Q8WTU0 396 aa11.74□□□□□ -0.53
ACTB-209ENST00000473257 TMEM174Q8WUU8 243 aa11.74□□□□□ -0.53
ACTB-209ENST00000473257 SNX21Q969T3 373 aa11.74□□□□□ -0.53
ACTB-209ENST00000473257 IMPG2Q9BZV3 1241 aa11.74□□□□□ -0.53
ACTB-209ENST00000473257 FAM124BQ9H5Z6 455 aaPredicted RBP11.74□□□□□ -0.53
ACTB-209ENST00000473257 C6orf106Q9H6K1 298 aaPredicted RBP11.74□□□□□ -0.53
ACTB-209ENST00000473257 GAREM1Q9H706 876 aa11.74□□□□□ -0.53
ACTB-209ENST00000473257 CLIC5Q9NZA1 410 aa11.74□□□□□ -0.53
ACTB-209ENST00000473257 SFMBT1Q9UHJ3 866 aa11.74□□□□□ -0.53
ACTB-209ENST00000473257 BTBD3Q9Y2F9 522 aa11.74□□□□□ -0.53
ACTB-209ENST00000473257 ZDHHC9Q9Y397 364 aa11.74□□□□□ -0.53
ACTB-209ENST00000473257 PCDHB9Q9Y5E1 797 aa11.74□□□□□ -0.53
ACTB-209ENST00000473257 ASXL3Q9C0F0 2248 aa11.74□□□□□ -0.53
ACTB-209ENST00000473257 A0A1B0GTW7 788 aa11.73□□□□□ -0.53
ACTB-209ENST00000473257 GOLGA6L7A0A1B0GV03 622 aa11.73□□□□□ -0.53
ACTB-209ENST00000473257 CBFA2T3O75081 653 aa11.73□□□□□ -0.53
ACTB-209ENST00000473257 ATXN1LP0C7T5 689 aaKnown RBP11.73□□□□□ -0.53
ACTB-209ENST00000473257 KRT13P13646 458 aa11.73□□□□□ -0.53
ACTB-209ENST00000473257 GNSP15586 552 aa11.73□□□□□ -0.53
ACTB-209ENST00000473257 CMA1P23946 247 aa11.73□□□□□ -0.53
ACTB-209ENST00000473257 HOXD9P28356 352 aaPredicted RBP11.73□□□□□ -0.53
ACTB-209ENST00000473257 ACSL1P33121 698 aa11.73□□□□□ -0.53
ACTB-209ENST00000473257 NUMBP49757 651 aa11.73□□□□□ -0.53
ACTB-209ENST00000473257 PDE4CQ08493 712 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms