RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 IER2Q9BTL4 223 aa13.69□□□□□ -0.22
TPM3-216ENST00000473036 TRIM5Q9C035 493 aa13.69□□□□□ -0.22
TPM3-216ENST00000473036 EPC1Q9H2F5 836 aa13.69□□□□□ -0.22
TPM3-216ENST00000473036 ZSCAN32Q9NX65 697 aa13.69□□□□□ -0.22
TPM3-216ENST00000473036 TAS2R14Q9NYV8 317 aa13.69□□□□□ -0.22
TPM3-216ENST00000473036 AIPL1Q9NZN9 384 aa13.69□□□□□ -0.22
TPM3-216ENST00000473036 NCDNQ9UBB6 729 aa13.69□□□□□ -0.22
TPM3-216ENST00000473036 AGO1Q9UL18 857 aaKnown RBP13.69□□□□□ -0.22
TPM3-216ENST00000473036 SH3BP1Q9Y3L3 701 aa13.69□□□□□ -0.22
TPM3-216ENST00000473036 GPR179Q6PRD1 2367 aa13.68□□□□□ -0.22
TPM3-216ENST00000473036 A0A1W2PQJ5 194 aa13.68□□□□□ -0.22
TPM3-216ENST00000473036 FAM170BA6NMN3 283 aa13.68□□□□□ -0.22
TPM3-216ENST00000473036 GOLGA6L6A8MZA4 724 aa13.68□□□□□ -0.22
TPM3-216ENST00000473036 GFRA2O00451 464 aa13.68□□□□□ -0.22
TPM3-216ENST00000473036 TRIM24O15164 1050 aa13.68□□□□□ -0.22
TPM3-216ENST00000473036 GJB6O95452 261 aa13.68□□□□□ -0.22
TPM3-216ENST00000473036 CHRM1P11229 460 aaPredicted RBP13.68□□□□□ -0.22
TPM3-216ENST00000473036 CHRNB1P11230 501 aa13.68□□□□□ -0.22
TPM3-216ENST00000473036 SKILP12757 684 aa13.68□□□□□ -0.22
TPM3-216ENST00000473036 NCAM1P13591 858 aa13.68□□□□□ -0.22
TPM3-216ENST00000473036 FERP16591 822 aa13.68□□□□□ -0.22
TPM3-216ENST00000473036 TFE3P19532 575 aaPredicted RBP13.68□□□□□ -0.22
TPM3-216ENST00000473036 MMP8P22894 467 aa13.68□□□□□ -0.22
TPM3-216ENST00000473036 CORO1AP31146 461 aaKnown RBP13.68□□□□□ -0.22
TPM3-216ENST00000473036 HOXC13P31276 330 aa13.68□□□□□ -0.22
TPM3-216ENST00000473036 YWHAZP63104 245 aaKnown RBP13.68□□□□□ -0.22
TPM3-216ENST00000473036 SLC6A3Q01959 620 aa13.68□□□□□ -0.22
TPM3-216ENST00000473036 GOLGA8FQ08AF8 430 aa13.68□□□□□ -0.22
TPM3-216ENST00000473036 GOLGA8DPQ0D2H9 430 aa13.68□□□□□ -0.22
TPM3-216ENST00000473036 GAS6Q14393 721 aa13.68□□□□□ -0.22
TPM3-216ENST00000473036 UBXN2BQ14CS0 331 aa13.68□□□□□ -0.22
TPM3-216ENST00000473036 PON2Q15165 354 aa13.68□□□□□ -0.22
TPM3-216ENST00000473036 CLEC16AQ2KHT3 1053 aa13.68□□□□□ -0.22
TPM3-216ENST00000473036 LY6G5CQ5SRR4 150 aa13.68□□□□□ -0.22
TPM3-216ENST00000473036 OR6B2Q6IFH4 312 aa13.68□□□□□ -0.22
TPM3-216ENST00000473036 FSTL4Q6MZW2 842 aa13.68□□□□□ -0.22
TPM3-216ENST00000473036 MAMSTRQ6ZN01 415 aa13.68□□□□□ -0.22
TPM3-216ENST00000473036 MMS22LQ6ZRQ5 1243 aa13.68□□□□□ -0.22
TPM3-216ENST00000473036 RSRC2Q7L4I2 434 aaKnown RBP13.68□□□□□ -0.22
TPM3-216ENST00000473036 BEND5Q7L4P6 421 aa13.68□□□□□ -0.22
TPM3-216ENST00000473036 RALGPS2Q86X27 583 aaPredicted RBP13.68□□□□□ -0.22
TPM3-216ENST00000473036 DEFB106AQ8N104 65 aa13.68□□□□□ -0.22
TPM3-216ENST00000473036 FAM3CQ92520 227 aa13.68□□□□□ -0.22
TPM3-216ENST00000473036 ATP2A3Q93084 1043 aa13.68□□□□□ -0.22
TPM3-216ENST00000473036 CLDN23Q96B33 292 aa13.68□□□□□ -0.22
TPM3-216ENST00000473036 FAM149B1Q96BN6 582 aa13.68□□□□□ -0.22
TPM3-216ENST00000473036 MYEOVQ96EZ4 313 aa13.68□□□□□ -0.22
TPM3-216ENST00000473036 SLC39A13Q96H72 371 aa13.68□□□□□ -0.22
TPM3-216ENST00000473036 MRFAP1L1Q96HT8 127 aa13.68□□□□□ -0.22
TPM3-216ENST00000473036 FCRL2Q96LA5 508 aaPredicted RBP13.68□□□□□ -0.22
TPM3-216ENST00000473036 CDK5RAP1Q96SZ6 601 aaKnown RBP13.68□□□□□ -0.22
TPM3-216ENST00000473036 EDEM3Q9BZQ6 932 aa13.68□□□□□ -0.22
TPM3-216ENST00000473036 PDCL3Q9H2J4 239 aa13.68□□□□□ -0.22
TPM3-216ENST00000473036 HAUS4Q9H6D7 363 aa13.68□□□□□ -0.22
TPM3-216ENST00000473036 C8orf33Q9H7E9 229 aaPredicted RBP13.68□□□□□ -0.22
TPM3-216ENST00000473036 POPDC2Q9HBU9 364 aa13.68□□□□□ -0.22
TPM3-216ENST00000473036 RBM12Q9NTZ6 932 aaKnown RBP13.68□□□□□ -0.22
TPM3-216ENST00000473036 SPATA6Q9NWH7 488 aaPredicted RBP13.68□□□□□ -0.22
TPM3-216ENST00000473036 C2orf42Q9NWW7 574 aa13.68□□□□□ -0.22
TPM3-216ENST00000473036 CAPN11Q9UMQ6 739 aa13.68□□□□□ -0.22
TPM3-216ENST00000473036 NDRG2Q9UN36 371 aaKnown RBP13.68□□□□□ -0.22
TPM3-216ENST00000473036 ITIH6Q6UXX5 1313 aa13.67□□□□□ -0.22
TPM3-216ENST00000473036 LILRB5O75023 590 aa13.67□□□□□ -0.22
TPM3-216ENST00000473036 PLEKP08567 350 aaPredicted RBP13.67□□□□□ -0.22
TPM3-216ENST00000473036 PRKCIP41743 596 aa13.67□□□□□ -0.22
TPM3-216ENST00000473036 GALK1P51570 392 aa13.67□□□□□ -0.22
TPM3-216ENST00000473036 COG7P83436 770 aa13.67□□□□□ -0.22
TPM3-216ENST00000473036 CENPCQ03188 943 aa13.67□□□□□ -0.22
TPM3-216ENST00000473036 CCINQ13939 588 aa13.67□□□□□ -0.22
TPM3-216ENST00000473036 TMEM196Q5HYL7 178 aa13.67□□□□□ -0.22
TPM3-216ENST00000473036 ZNF852Q6ZMS4 543 aa13.67□□□□□ -0.22
TPM3-216ENST00000473036 SLC26A9Q7LBE3 791 aa13.67□□□□□ -0.22
TPM3-216ENST00000473036 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.67□□□□□ -0.22
TPM3-216ENST00000473036 TADA2BQ86TJ2 420 aa13.67□□□□□ -0.22
TPM3-216ENST00000473036 ERICH1Q86X53 443 aa13.67□□□□□ -0.22
TPM3-216ENST00000473036 DENND1CQ8IV53 801 aa13.67□□□□□ -0.22
TPM3-216ENST00000473036 VSTM4Q8IW00 320 aa13.67□□□□□ -0.22
TPM3-216ENST00000473036 FAM217AQ8IXS0 508 aa13.67□□□□□ -0.22
TPM3-216ENST00000473036 PHTF2Q8N3S3 785 aa13.67□□□□□ -0.22
TPM3-216ENST00000473036 ZNF397Q8NF99 534 aaPredicted RBP13.67□□□□□ -0.22
TPM3-216ENST00000473036 RNF139Q8WU17 664 aa13.67□□□□□ -0.22
TPM3-216ENST00000473036 CPLX3Q8WVH0 158 aa13.67□□□□□ -0.22
TPM3-216ENST00000473036 C18orf8Q96DM3 657 aa13.67□□□□□ -0.22
TPM3-216ENST00000473036 RTKNQ9BST9 563 aa13.67□□□□□ -0.22
TPM3-216ENST00000473036 NUP58Q9BVL2 599 aa13.67□□□□□ -0.22
TPM3-216ENST00000473036 ANLNQ9NQW6 1124 aa13.67□□□□□ -0.22
TPM3-216ENST00000473036 OLA1Q9NTK5 396 aaKnown RBP13.67□□□□□ -0.22
TPM3-216ENST00000473036 ASNSD1Q9NWL6 643 aa13.67□□□□□ -0.22
TPM3-216ENST00000473036 XPO7Q9UIA9 1087 aaKnown RBP13.67□□□□□ -0.22
TPM3-216ENST00000473036 TMEM59LQ9UK28 342 aa13.67□□□□□ -0.22
TPM3-216ENST00000473036 MRPS17Q9Y2R5 130 aaKnown RBP13.67□□□□□ -0.22
TPM3-216ENST00000473036 HBS1LQ9Y450 684 aaKnown RBP13.67□□□□□ -0.22
TPM3-216ENST00000473036 MYO18AQ92614 2054 aaKnown RBP13.67□□□□□ -0.22
TPM3-216ENST00000473036 TCRBV5S1A1TA0A578 114 aa13.66□□□□□ -0.22
TPM3-216ENST00000473036 I6L893 689 aaPredicted RBP13.66□□□□□ -0.22
TPM3-216ENST00000473036 DDX3XO00571 662 aaKnown RBP eCLIP13.66□□□□□ -0.22
TPM3-216ENST00000473036 TRDMT1O14717 391 aaKnown RBP13.66□□□□□ -0.22
TPM3-216ENST00000473036 NFATC1O95644 943 aa13.66□□□□□ -0.22
TPM3-216ENST00000473036 EGFP01133 1207 aa13.66□□□□□ -0.22
TPM3-216ENST00000473036 GLI1P08151 1106 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms