RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 EFHC1Q5JVL4 640 aa10.45□□□□□ -0.74
APTX-216ENST00000472896 ARPINQ7Z6K5 226 aa10.45□□□□□ -0.74
APTX-216ENST00000472896 PATL1Q86TB9 770 aaKnown RBP10.45□□□□□ -0.74
APTX-216ENST00000472896 ERI1Q8IV48 349 aaKnown RBP10.45□□□□□ -0.74
APTX-216ENST00000472896 PPTC7Q8NI37 304 aa10.45□□□□□ -0.74
APTX-216ENST00000472896 NSUN6Q8TEA1 469 aaKnown RBP10.45□□□□□ -0.74
APTX-216ENST00000472896 HAS1Q92839 578 aa10.45□□□□□ -0.74
APTX-216ENST00000472896 EMID1Q96A84 441 aaPredicted RBP10.45□□□□□ -0.74
APTX-216ENST00000472896 RMDN3Q96TC7 470 aa10.45□□□□□ -0.74
APTX-216ENST00000472896 SAYSD1Q9NPB0 183 aa10.45□□□□□ -0.74
APTX-216ENST00000472896 CHST7Q9NS84 486 aa10.45□□□□□ -0.74
APTX-216ENST00000472896 SLC7A8Q9UHI5 535 aa10.45□□□□□ -0.74
APTX-216ENST00000472896 GTF3C4Q9UKN8 822 aa10.45□□□□□ -0.74
APTX-216ENST00000472896 PPM1HQ9ULR3 514 aa10.45□□□□□ -0.74
APTX-216ENST00000472896 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.45□□□□□ -0.74
APTX-216ENST00000472896 EMSYQ7Z589 1322 aa10.45□□□□□ -0.74
APTX-216ENST00000472896 KIAA1217Q5T5P2 1943 aa10.45□□□□□ -0.74
APTX-216ENST00000472896 C5orf42Q9H799 3197 aa10.45□□□□□ -0.74
APTX-216ENST00000472896 NPHP3-ACAD11A0A0J9YXS1 232 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 TMEM247A6NEH6 219 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 MATN2O00339 956 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 ALOX15BO15296 676 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 EDIL3O43854 480 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 CCNT2O60583 730 aaKnown RBP10.44□□□□□ -0.74
APTX-216ENST00000472896 TRMUO75648 421 aaKnown RBP10.44□□□□□ -0.74
APTX-216ENST00000472896 STK10O94804 968 aaKnown RBP10.44□□□□□ -0.74
APTX-216ENST00000472896 TNFAIP8O95379 198 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 SNHG28P0DPA3 235 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 FGFR1P11362 822 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 HOXD8P13378 290 aaPredicted RBP10.44□□□□□ -0.74
APTX-216ENST00000472896 TSHRP16473 764 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 BMPR1AP36894 532 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 CASP4P49662 377 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 CREB5Q02930 508 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 PPIDQ08752 370 aaKnown RBP10.44□□□□□ -0.74
APTX-216ENST00000472896 ADAM15Q13444 863 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 LPIN1Q14693 890 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 SYCP2LQ5T4T6 812 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 LRRC8BQ6P9F7 803 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 TSHZ1Q6ZSZ6 1077 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 TMEM110Q86TL2 294 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 TMEM126BQ8IUX1 230 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 RBM15BQ8NDT2 890 aaKnown RBP10.44□□□□□ -0.74
APTX-216ENST00000472896 CATSPER1Q8NEC5 780 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 ERMNQ8TAM6 284 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 SNRNP27Q8WVK2 155 aaKnown RBP10.44□□□□□ -0.74
APTX-216ENST00000472896 SEPT8Q92599 483 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 TSPAN18Q96SJ8 248 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 C16orf70Q9BSU1 422 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 THTPAQ9BU02 230 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 NUP85Q9BW27 656 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 KATNAL1Q9BW62 490 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 MAK16Q9BXY0 300 aaKnown RBP10.44□□□□□ -0.74
APTX-216ENST00000472896 WWP1Q9H0M0 922 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 ZHX3Q9H4I2 956 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 BCAS3Q9H6U6 928 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 RIOX1Q9H6W3 641 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 TRPV5Q9NQA5 729 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 RAB26Q9ULW5 256 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 NLRC5Q86WI3 1866 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 H3BRJ5 948 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 DNALI1O14645 258 aaPredicted RBP10.44□□□□□ -0.74
APTX-216ENST00000472896 P4HA2O15460 535 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 TREHO43280 583 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 RGS20O76081 388 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 CSPG5O95196 566 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 ALDH2P05091 517 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 NR3C2P08235 984 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 DHRS4L1P0CG22 281 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 KRT4P19013 534 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 EIF2AK2P19525 551 aaKnown RBP10.44□□□□□ -0.74
APTX-216ENST00000472896 ADRA1DP25100 572 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 ADSSP30520 456 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 STIP1P31948 543 aaKnown RBP10.44□□□□□ -0.74
APTX-216ENST00000472896 CTNNB1P35222 781 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 HOXD12P35452 270 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 CASP5P51878 434 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 NR1H2P55055 460 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 ZXDAP98168 799 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 MYL7Q01449 175 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 SP2Q02086 613 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 OVGP1Q12889 678 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 SMAD4Q13485 552 aaKnown RBP10.44□□□□□ -0.74
APTX-216ENST00000472896 CAMK1Q14012 370 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 KRT81Q14533 505 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 KLHL38Q2WGJ6 581 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 HSDL1Q3SXM5 330 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 NADK2Q4G0N4 442 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 KLHL35Q6PF15 583 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 ADGRD1Q6QNK2 874 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 PACS1Q6VY07 963 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 BANPQ8N9N5 519 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 DNAJC1Q96KC8 554 aaKnown RBP10.44□□□□□ -0.74
APTX-216ENST00000472896 CYTH2Q99418 400 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 HNRNPABQ99729 332 aaKnown RBP10.44□□□□□ -0.74
APTX-216ENST00000472896 CD207Q9UJ71 328 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 FAF1Q9UNN5 650 aaPredicted RBP10.44□□□□□ -0.74
APTX-216ENST00000472896 LZTS1Q9Y250 596 aa10.44□□□□□ -0.74
APTX-216ENST00000472896 R3HDM2Q9Y2K5 976 aaKnown RBP10.44□□□□□ -0.74
APTX-216ENST00000472896 TMEM98Q9Y2Y6 226 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms