RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 C15orf59Q2T9L4 293 aaPredicted RBP7.92□□□□□ -1.14
CCDC171-205ENST00000472806 HHATQ5VTY9 493 aa7.92□□□□□ -1.14
CCDC171-205ENST00000472806 TWF2Q6IBS0 349 aaKnown RBP7.92□□□□□ -1.14
CCDC171-205ENST00000472806 PMF1Q6P1K2 205 aa7.92□□□□□ -1.14
CCDC171-205ENST00000472806 RGS9BPQ6ZS82 235 aa7.92□□□□□ -1.14
CCDC171-205ENST00000472806 LIMS2Q7Z4I7 341 aa7.92□□□□□ -1.14
CCDC171-205ENST00000472806 UNC45BQ8IWX7 931 aa7.92□□□□□ -1.14
CCDC171-205ENST00000472806 ADGRF2Q8IZF7 708 aa7.92□□□□□ -1.14
CCDC171-205ENST00000472806 TMEM86AQ8N2M4 240 aa7.92□□□□□ -1.14
CCDC171-205ENST00000472806 PLD5Q8N7P1 536 aa7.92□□□□□ -1.14
CCDC171-205ENST00000472806 C12orf29Q8N999 325 aa7.92□□□□□ -1.14
CCDC171-205ENST00000472806 FAM71DQ8N9W8 422 aa7.92□□□□□ -1.14
CCDC171-205ENST00000472806 GLIS1Q8NBF1 620 aa7.92□□□□□ -1.14
CCDC171-205ENST00000472806 MCUQ8NE86 351 aa7.92□□□□□ -1.14
CCDC171-205ENST00000472806 MGARPQ8TDB4 240 aa7.92□□□□□ -1.14
CCDC171-205ENST00000472806 CENPIQ92674 756 aaPredicted RBP7.92□□□□□ -1.14
CCDC171-205ENST00000472806 ZMAT2Q96NC0 199 aaKnown RBP7.92□□□□□ -1.14
CCDC171-205ENST00000472806 PEBP4Q96S96 227 aa7.92□□□□□ -1.14
CCDC171-205ENST00000472806 HNRNPABQ99729 332 aaKnown RBP7.92□□□□□ -1.14
CCDC171-205ENST00000472806 PTPN18Q99952 460 aa7.92□□□□□ -1.14
CCDC171-205ENST00000472806 ELAC2Q9BQ52 826 aaKnown RBP7.92□□□□□ -1.14
CCDC171-205ENST00000472806 MTG1Q9BT17 334 aaPredicted RBP7.92□□□□□ -1.14
CCDC171-205ENST00000472806 SNRNP25Q9BV90 132 aaKnown RBP7.92□□□□□ -1.14
CCDC171-205ENST00000472806 TRIM62Q9BVG3 475 aa7.92□□□□□ -1.14
CCDC171-205ENST00000472806 NXF3Q9H4D5 531 aaKnown RBP7.92□□□□□ -1.14
CCDC171-205ENST00000472806 ACSS3Q9H6R3 686 aa7.92□□□□□ -1.14
CCDC171-205ENST00000472806 LRRC4Q9HBW1 653 aa7.92□□□□□ -1.14
CCDC171-205ENST00000472806 PCDH18Q9HCL0 1135 aa7.92□□□□□ -1.14
CCDC171-205ENST00000472806 PNPLA8Q9NP80 782 aa7.92□□□□□ -1.14
CCDC171-205ENST00000472806 FAM49BQ9NUQ9 324 aa7.92□□□□□ -1.14
CCDC171-205ENST00000472806 TMEM51Q9NW97 253 aa7.92□□□□□ -1.14
CCDC171-205ENST00000472806 RRN3Q9NYV6 651 aa7.92□□□□□ -1.14
CCDC171-205ENST00000472806 TBK1Q9UHD2 729 aa7.92□□□□□ -1.14
CCDC171-205ENST00000472806 ZMYND8Q9ULU4 1186 aaPredicted RBP7.92□□□□□ -1.14
CCDC171-205ENST00000472806 ARL2BPQ9Y2Y0 163 aa7.92□□□□□ -1.14
CCDC171-205ENST00000472806 TRPV2Q9Y5S1 764 aa7.92□□□□□ -1.14
CCDC171-205ENST00000472806 CAPN7Q9Y6W3 813 aa7.92□□□□□ -1.14
CCDC171-205ENST00000472806 CFAP73A6NFT4 308 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 TCP11X1B4DZS4 312 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 H3BRJ5 948 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 TNPO2O14787 897 aaKnown RBP7.91□□□□□ -1.14
CCDC171-205ENST00000472806 TM9SF1O15321 606 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 KCNN4O15554 427 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 TREHO43280 583 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 SNX3O60493 162 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 DUSP11O75319 330 aaKnown RBP7.91□□□□□ -1.14
CCDC171-205ENST00000472806 ITGB2P05107 769 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 INHBAP08476 426 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 CD48P09326 243 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 SKIP12755 728 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 TPSB2P20231 275 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 AKAP5P24588 427 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 CYP2F1P24903 491 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 ADORA2BP29275 332 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 HOXC8P31273 242 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 FDFT1P37268 417 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 MATKP42679 507 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 MAGEA6P43360 314 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 RAB27AP51159 221 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 ZNF157P51786 506 aaPredicted RBP7.91□□□□□ -1.14
CCDC171-205ENST00000472806 GDF10P55107 478 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 HUNKP57058 714 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 MRPS6P82932 125 aaKnown RBP7.91□□□□□ -1.14
CCDC171-205ENST00000472806 CDK16Q00536 496 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 SREBF2Q12772 1141 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 KCNJ11Q14654 390 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 TPSAB1Q15661 275 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 KCTD19Q17RG1 926 aaPredicted RBP7.91□□□□□ -1.14
CCDC171-205ENST00000472806 SLC25A52Q3SY17 297 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 BBS9Q3SYG4 887 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 SLC45A4Q5BKX6 768 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 GLRA4Q5JXX5 417 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 UBXN11Q5T124 520 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 MFSD14CQ5VZR4 134 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 NUGGCQ68CJ6 796 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 C1orf228Q6PIY5 440 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 RIPOR1Q6ZS17 1223 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 C3orf62Q6ZUJ4 267 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 SPATA21Q7Z572 469 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 PRUNE1Q86TP1 453 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 ZC3H18Q86VM9 953 aaKnown RBP7.91□□□□□ -1.14
CCDC171-205ENST00000472806 CCNJLQ8IV13 435 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 ANKMY2Q8IV38 441 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 VPS52Q8N1B4 723 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 SIX6OS1Q8N1H7 587 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 B3GALNT2Q8NCR0 500 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 FBXO36Q8NEA4 188 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 LRRC8CQ8TDW0 803 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 KCTD13Q8WZ19 329 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 C18orf25Q96B23 403 aaPredicted RBP7.91□□□□□ -1.14
CCDC171-205ENST00000472806 PWWP2AQ96N64 755 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 TGS1Q96RS0 853 aaKnown RBP7.91□□□□□ -1.14
CCDC171-205ENST00000472806 MED10Q9BTT4 135 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 DUSP16Q9BY84 665 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 NRDE2Q9H7Z3 1164 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 XAB2Q9HCS7 855 aaKnown RBP7.91□□□□□ -1.14
CCDC171-205ENST00000472806 RAB6BQ9NRW1 208 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 HAUS2Q9NVX0 235 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 KLHL14Q9P2G3 628 aa7.91□□□□□ -1.14
CCDC171-205ENST00000472806 CTNNAL1Q9UBT7 734 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms