RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 MRPS23Q9Y3D9 190 aaKnown RBP3.84□□□□□ -1.79
XRN1-209ENST00000472625 NUMBLQ9Y6R0 609 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 PLXNA4Q9HCM2 1894 aa3.84□□□□□ -1.8
XRN1-209ENST00000472625 ATG2AQ2TAZ0 1938 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 BAZ2BQ9UIF8 2168 aaKnown RBP3.83□□□□□ -1.8
XRN1-209ENST00000472625 MYO7AQ13402 2215 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 FAM186AA6NE01 2351 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 RIF1Q5UIP0 2472 aaKnown RBP3.83□□□□□ -1.8
XRN1-209ENST00000472625 A0A1B0GUA9 196 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 ARHGEF37A1IGU5 675 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 LRRIQ4A6NIV6 560 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 H7C4K7 107 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 ACOT7O00154 380 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 ZNF197O14709 1029 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 CSDE1O75534 798 aaKnown RBP3.83□□□□□ -1.8
XRN1-209ENST00000472625 DDHD2O94830 711 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 FGF19O95750 216 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 CKMP06732 381 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 THP07101 528 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 WEE2P0C1S8 567 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 GLULP15104 373 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 PAX3P23760 479 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 HOXA11P31270 313 aaPredicted RBP3.83□□□□□ -1.8
XRN1-209ENST00000472625 ELF1P32519 619 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 ABCD1P33897 745 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 CNR2P34972 360 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 KRT2P35908 639 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 STAT5AP42229 794 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 CCR3P51677 355 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 EPHA5P54756 1037 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 MLLT6P55198 1093 aaPredicted RBP3.83□□□□□ -1.8
XRN1-209ENST00000472625 ANAPC15P60006 121 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 MBTD1Q05BQ5 628 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 SPIRE1Q08AE8 756 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 IFRD2Q12894 506 aaPredicted RBP3.83□□□□□ -1.8
XRN1-209ENST00000472625 PLD1Q13393 1074 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 PRPF4BQ13523 1007 aaKnown RBP3.83□□□□□ -1.8
XRN1-209ENST00000472625 LRRC32Q14392 662 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 UBXN2BQ14CS0 331 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 SF3A1Q15459 793 aaKnown RBP3.83□□□□□ -1.8
XRN1-209ENST00000472625 CALCRLQ16602 461 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 FAM187BQ17R55 369 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 ADCK5Q3MIX3 580 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 PABPC1LQ4VXU2 614 aaKnown RBP3.83□□□□□ -1.8
XRN1-209ENST00000472625 TM4SF20Q53R12 229 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 SPECC1Q5M775 1068 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 STEAP3Q658P3 488 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 CDCA2Q69YH5 1023 aaPredicted RBP3.83□□□□□ -1.8
XRN1-209ENST00000472625 ABHD17CQ6PCB6 329 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 ETV3LQ6ZN32 361 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 TPH2Q8IWU9 490 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 CARFQ8N187 725 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 SLC44A3Q8N4M1 653 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 DEPDC1BQ8WUY9 529 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 KIFAP3Q92845 792 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 TMEM143Q96AN5 459 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 ZBTB8AQ96BR9 441 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 ZNF707Q96C28 371 aaPredicted RBP3.83□□□□□ -1.8
XRN1-209ENST00000472625 ZNF668Q96K58 619 aaPredicted RBP3.83□□□□□ -1.8
XRN1-209ENST00000472625 IFT74Q96LB3 600 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 CEP89Q96ST8 783 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 GAD1Q99259 594 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 RTKNQ9BST9 563 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 DHRS4Q9BTZ2 278 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 DDX23Q9BUQ8 820 aaKnown RBP3.83□□□□□ -1.8
XRN1-209ENST00000472625 VN1R3Q9BXE9 311 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 GPR88Q9GZN0 384 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 EPC1Q9H2F5 836 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 EPB41L1Q9H4G0 881 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 IPPKQ9H8X2 491 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 TRIM39Q9HCM9 518 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 TRPV5Q9NQA5 729 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 MARCH5Q9NX47 278 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 DLL3Q9NYJ7 618 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 DTLQ9NZJ0 730 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 NUDT5Q9UKK9 219 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 CBLCQ9ULV8 474 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 PCDHA12Q9UN75 941 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 SNX14Q9Y5W7 946 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 DENND4AQ7Z401 1863 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 DOCK5Q9H7D0 1870 aa3.83□□□□□ -1.8
XRN1-209ENST00000472625 PTPRZ1P23471 2315 aaPredicted RBP3.83□□□□□ -1.8
XRN1-209ENST00000472625 H0YCG3 227 aa3.82□□□□□ -1.8
XRN1-209ENST00000472625 ACKR2O00590 384 aa3.82□□□□□ -1.8
XRN1-209ENST00000472625 PRRG1O14668 218 aa3.82□□□□□ -1.8
XRN1-209ENST00000472625 HGSO14964 777 aaPredicted RBP3.82□□□□□ -1.8
XRN1-209ENST00000472625 SYN3O14994 580 aa3.82□□□□□ -1.8
XRN1-209ENST00000472625 XPOTO43592 962 aaKnown RBP3.82□□□□□ -1.8
XRN1-209ENST00000472625 NARSO43776 548 aaKnown RBP3.82□□□□□ -1.8
XRN1-209ENST00000472625 SLC37A4O43826 429 aa3.82□□□□□ -1.8
XRN1-209ENST00000472625 RFPL2O75678 378 aa3.82□□□□□ -1.8
XRN1-209ENST00000472625 STBD1O95210 358 aa3.82□□□□□ -1.8
XRN1-209ENST00000472625 NPTXRO95502 500 aa3.82□□□□□ -1.8
XRN1-209ENST00000472625 SP9P0CG40 484 aa3.82□□□□□ -1.8
XRN1-209ENST00000472625 COL6A2P12110 1019 aa3.82□□□□□ -1.8
XRN1-209ENST00000472625 ARF4P18085 180 aaPredicted RBP3.82□□□□□ -1.8
XRN1-209ENST00000472625 ARL2P36404 184 aa3.82□□□□□ -1.8
XRN1-209ENST00000472625 NAMPTP43490 491 aa3.82□□□□□ -1.8
XRN1-209ENST00000472625 RARRES1P49788 294 aa3.82□□□□□ -1.8
XRN1-209ENST00000472625 NPEPPSP55786 919 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms