RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 ZNF395Q9H8N7 513 aaPredicted RBP9.62□□□□□ -0.87
SMC4-213ENST00000472282 KIF9Q9HAQ2 790 aa9.62□□□□□ -0.87
SMC4-213ENST00000472282 PARD6AQ9NPB6 346 aa9.62□□□□□ -0.87
SMC4-213ENST00000472282 DMAP1Q9NPF5 467 aaPredicted RBP9.62□□□□□ -0.87
SMC4-213ENST00000472282 ACP6Q9NPH0 428 aa9.62□□□□□ -0.87
SMC4-213ENST00000472282 THG1LQ9NWX6 298 aaKnown RBP9.62□□□□□ -0.87
SMC4-213ENST00000472282 NCDNQ9UBB6 729 aa9.62□□□□□ -0.87
SMC4-213ENST00000472282 UXTQ9UBK9 157 aaPredicted RBP9.62□□□□□ -0.87
SMC4-213ENST00000472282 TSPAN16Q9UKR8 245 aa9.62□□□□□ -0.87
SMC4-213ENST00000472282 NUP205Q92621 2012 aa9.61□□□□□ -0.87
SMC4-213ENST00000472282 EP300Q09472 2414 aaPredicted RBP9.61□□□□□ -0.87
SMC4-213ENST00000472282 TRAV19A0A0A6YYK7 116 aa9.61□□□□□ -0.87
SMC4-213ENST00000472282 A0A1W2PQC6 194 aa9.61□□□□□ -0.87
SMC4-213ENST00000472282 F8VZ95 297 aa9.61□□□□□ -0.87
SMC4-213ENST00000472282 O00370 1275 aa9.61□□□□□ -0.87
SMC4-213ENST00000472282 FOXN3O00409 490 aaPredicted RBP9.61□□□□□ -0.87
SMC4-213ENST00000472282 TRDMT1O14717 391 aaKnown RBP9.61□□□□□ -0.87
SMC4-213ENST00000472282 CYP26A1O43174 497 aa9.61□□□□□ -0.87
SMC4-213ENST00000472282 THAP12O43422 761 aa9.61□□□□□ -0.87
SMC4-213ENST00000472282 BEST1O76090 585 aa9.61□□□□□ -0.87
SMC4-213ENST00000472282 USP17L7P0C7H9 530 aa9.61□□□□□ -0.87
SMC4-213ENST00000472282 GNA15P30679 374 aa9.61□□□□□ -0.87
SMC4-213ENST00000472282 GJA4P35212 333 aa9.61□□□□□ -0.87
SMC4-213ENST00000472282 PXNP49023 591 aaPredicted RBP9.61□□□□□ -0.87
SMC4-213ENST00000472282 GALK1P51570 392 aa9.61□□□□□ -0.87
SMC4-213ENST00000472282 BCAT1P54687 386 aa9.61□□□□□ -0.87
SMC4-213ENST00000472282 MAP3K7CLP57077 242 aa9.61□□□□□ -0.87
SMC4-213ENST00000472282 GAB4Q2WGN9 574 aa9.61□□□□□ -0.87
SMC4-213ENST00000472282 EML3Q32P44 896 aa9.61□□□□□ -0.87
SMC4-213ENST00000472282 C1orf228Q6PIY5 440 aa9.61□□□□□ -0.87
SMC4-213ENST00000472282 DENND5BQ6ZUT9 1274 aa9.61□□□□□ -0.87
SMC4-213ENST00000472282 TTC30AQ86WT1 665 aa9.61□□□□□ -0.87
SMC4-213ENST00000472282 FAM71AQ8IYT1 594 aa9.61□□□□□ -0.87
SMC4-213ENST00000472282 SH3RF2Q8TEC5 729 aa9.61□□□□□ -0.87
SMC4-213ENST00000472282 C8orf48Q96LL4 319 aa9.61□□□□□ -0.87
SMC4-213ENST00000472282 SPAG5Q96R06 1193 aa9.61□□□□□ -0.87
SMC4-213ENST00000472282 ANP32EQ9BTT0 268 aa9.61□□□□□ -0.87
SMC4-213ENST00000472282 TTLL2Q9BWV7 592 aa9.61□□□□□ -0.87
SMC4-213ENST00000472282 DUSP16Q9BY84 665 aa9.61□□□□□ -0.87
SMC4-213ENST00000472282 FAM126AQ9BYI3 521 aaPredicted RBP9.61□□□□□ -0.87
SMC4-213ENST00000472282 STK33Q9BYT3 514 aa9.61□□□□□ -0.87
SMC4-213ENST00000472282 ECT2Q9H8V3 914 aa9.61□□□□□ -0.87
SMC4-213ENST00000472282 ZMYM5Q9UJ78 669 aa9.61□□□□□ -0.87
SMC4-213ENST00000472282 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.61□□□□□ -0.875e-7■■■■□ 23.7
SMC4-213ENST00000472282 DAAM1Q9Y4D1 1078 aa9.61□□□□□ -0.87
SMC4-213ENST00000472282 GPR179Q6PRD1 2367 aa9.61□□□□□ -0.87
SMC4-213ENST00000472282 TNRC6BQ9UPQ9 1833 aaKnown RBP9.61□□□□□ -0.87
SMC4-213ENST00000472282 THADAQ6YHU6 1953 aa9.61□□□□□ -0.87
SMC4-213ENST00000472282 DCHS1Q96JQ0 3298 aa9.6□□□□□ -0.87
SMC4-213ENST00000472282 MYO18AQ92614 2054 aaKnown RBP9.6□□□□□ -0.87
SMC4-213ENST00000472282 SPTBN4Q9H254 2564 aa9.6□□□□□ -0.87
SMC4-213ENST00000472282 ZNF840PA6NDX5 716 aa9.6□□□□□ -0.87
SMC4-213ENST00000472282 M0QYV0 167 aa9.6□□□□□ -0.87
SMC4-213ENST00000472282 CBFA2T2O43439 604 aa9.6□□□□□ -0.87
SMC4-213ENST00000472282 PAPSS2O95340 614 aaPredicted RBP9.6□□□□□ -0.87
SMC4-213ENST00000472282 OLFM2O95897 454 aa9.6□□□□□ -0.87
SMC4-213ENST00000472282 TPM3P06753 285 aa9.6□□□□□ -0.87
SMC4-213ENST00000472282 HDCP19113 662 aa9.6□□□□□ -0.87
SMC4-213ENST00000472282 PBX1P40424 430 aa9.6□□□□□ -0.87
SMC4-213ENST00000472282 PTGIRP43119 386 aa9.6□□□□□ -0.87
SMC4-213ENST00000472282 PGFP49763 221 aa9.6□□□□□ -0.87
SMC4-213ENST00000472282 JAM2P57087 298 aa9.6□□□□□ -0.87
SMC4-213ENST00000472282 BST2Q10589 180 aaKnown RBP9.6□□□□□ -0.87
SMC4-213ENST00000472282 TAF10Q12962 218 aa9.6□□□□□ -0.87
SMC4-213ENST00000472282 CC2D1AQ6P1N0 951 aaPredicted RBP9.6□□□□□ -0.87
SMC4-213ENST00000472282 PRR23BQ6ZRT6 265 aa9.6□□□□□ -0.87
SMC4-213ENST00000472282 CACNA2D4Q7Z3S7 1137 aa9.6□□□□□ -0.87
SMC4-213ENST00000472282 UBA3Q8TBC4 463 aa9.6□□□□□ -0.87
SMC4-213ENST00000472282 OSCP1Q8WVF1 389 aa9.6□□□□□ -0.87
SMC4-213ENST00000472282 CSNK1G1Q9HCP0 422 aa9.6□□□□□ -0.87
SMC4-213ENST00000472282 TMPRSS4Q9NRS4 437 aa9.6□□□□□ -0.87
SMC4-213ENST00000472282 DUS2Q9NX74 493 aaKnown RBP9.6□□□□□ -0.87
SMC4-213ENST00000472282 HESX1Q9UBX0 185 aa9.6□□□□□ -0.87
SMC4-213ENST00000472282 KIAA1257Q9ULG3 409 aa9.6□□□□□ -0.87
SMC4-213ENST00000472282 ARHGAP26Q9UNA1 814 aa9.6□□□□□ -0.87
SMC4-213ENST00000472282 HHLA1C9JL84 531 aa9.59□□□□□ -0.87
SMC4-213ENST00000472282 ERVH48-1M5A8F1 160 aa9.59□□□□□ -0.87
SMC4-213ENST00000472282 LEFTY2O00292 366 aa9.59□□□□□ -0.87
SMC4-213ENST00000472282 TULP2O00295 520 aa9.59□□□□□ -0.87
SMC4-213ENST00000472282 TNFRSF10BO14763 440 aa9.59□□□□□ -0.87
SMC4-213ENST00000472282 AP5Z1O43299 807 aa9.59□□□□□ -0.87
SMC4-213ENST00000472282 GFPT2O94808 682 aa9.59□□□□□ -0.87
SMC4-213ENST00000472282 ABL1P00519 1130 aa9.59□□□□□ -0.87
SMC4-213ENST00000472282 OAS1P00973 400 aaKnown RBP9.59□□□□□ -0.87
SMC4-213ENST00000472282 TCF3P15923 654 aa9.59□□□□□ -0.87
SMC4-213ENST00000472282 SOX5P35711 763 aa9.59□□□□□ -0.87
SMC4-213ENST00000472282 OPRD1P41143 372 aa9.59□□□□□ -0.87
SMC4-213ENST00000472282 IFNAR2P48551 515 aa9.59□□□□□ -0.87
SMC4-213ENST00000472282 PDE6CP51160 858 aa9.59□□□□□ -0.87
SMC4-213ENST00000472282 SLC5A3P53794 718 aa9.59□□□□□ -0.87
SMC4-213ENST00000472282 PDE4CQ08493 712 aa9.59□□□□□ -0.87
SMC4-213ENST00000472282 SPEM2Q0P670 501 aa9.59□□□□□ -0.87
SMC4-213ENST00000472282 MESP2Q0VG99 397 aa9.59□□□□□ -0.87
SMC4-213ENST00000472282 PDGFRLQ15198 375 aa9.59□□□□□ -0.87
SMC4-213ENST00000472282 STILQ15468 1287 aa9.59□□□□□ -0.87
SMC4-213ENST00000472282 CNGA2Q16280 664 aa9.59□□□□□ -0.87
SMC4-213ENST00000472282 LCLAT1Q6UWP7 414 aa9.59□□□□□ -0.87
SMC4-213ENST00000472282 GPRIN1Q7Z2K8 1008 aa9.59□□□□□ -0.87
SMC4-213ENST00000472282 SLC47A2Q86VL8 602 aa9.59□□□□□ -0.87
SMC4-213ENST00000472282 LONP2Q86WA8 852 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms