RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 PARP6Q2NL67 630 aa10.99□□□□□ -0.65
APLF-204ENST00000471727 PRAMEF19Q5SWL8 479 aa10.99□□□□□ -0.65
APLF-204ENST00000471727 STXBP5Q5T5C0 1151 aa10.99□□□□□ -0.65
APLF-204ENST00000471727 NCBP2-AS2Q69YL0 99 aa10.99□□□□□ -0.65
APLF-204ENST00000471727 TWF2Q6IBS0 349 aaKnown RBP10.99□□□□□ -0.65
APLF-204ENST00000471727 TIFABQ6ZNK6 161 aa10.99□□□□□ -0.65
APLF-204ENST00000471727 ASRGL1Q7L266 308 aa10.99□□□□□ -0.65
APLF-204ENST00000471727 CCDC91Q7Z6B0 441 aa10.99□□□□□ -0.65
APLF-204ENST00000471727 TBC1D1Q86TI0 1168 aaPredicted RBP10.99□□□□□ -0.65
APLF-204ENST00000471727 SIX6OS1Q8N1H7 587 aa10.99□□□□□ -0.65
APLF-204ENST00000471727 AGGF1Q8N302 714 aaeCLIP10.99□□□□□ -0.65
APLF-204ENST00000471727 CCDC110Q8TBZ0 833 aa10.99□□□□□ -0.65
APLF-204ENST00000471727 C10orf82Q8WW14 230 aa10.99□□□□□ -0.65
APLF-204ENST00000471727 TMEM40Q8WWA1 233 aa10.99□□□□□ -0.65
APLF-204ENST00000471727 NTAN1Q96AB6 310 aa10.99□□□□□ -0.65
APLF-204ENST00000471727 FAM149B1Q96BN6 582 aa10.99□□□□□ -0.65
APLF-204ENST00000471727 CFAP36Q96G28 342 aa10.99□□□□□ -0.65
APLF-204ENST00000471727 SIGLEC10Q96LC7 697 aa10.99□□□□□ -0.65
APLF-204ENST00000471727 RMDN2Q96LZ7 410 aa10.99□□□□□ -0.65
APLF-204ENST00000471727 TMEM237Q96Q45 408 aa10.99□□□□□ -0.65
APLF-204ENST00000471727 PPP1R10Q96QC0 940 aaKnown RBP10.99□□□□□ -0.65
APLF-204ENST00000471727 SLC2A13Q96QE2 648 aa10.99□□□□□ -0.65
APLF-204ENST00000471727 NPY6RQ99463 290 aa10.99□□□□□ -0.65
APLF-204ENST00000471727 TRIM55Q9BYV6 548 aa10.99□□□□□ -0.65
APLF-204ENST00000471727 DTLQ9NZJ0 730 aa10.99□□□□□ -0.65
APLF-204ENST00000471727 KLK14Q9P0G3 267 aa10.99□□□□□ -0.65
APLF-204ENST00000471727 PTCH2Q9Y6C5 1203 aa10.99□□□□□ -0.65
APLF-204ENST00000471727 USP3Q9Y6I4 520 aa10.99□□□□□ -0.65
APLF-204ENST00000471727 F9P00740 461 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 C1QAP02745 245 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 ATP5BP06576 529 aaKnown RBP10.98□□□□□ -0.65
APLF-204ENST00000471727 FAM200BP0CF97 657 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 AKR1A1P14550 325 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 ADRA1DP25100 572 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 RPL9P32969 192 aaKnown RBP10.98□□□□□ -0.65
APLF-204ENST00000471727 CCNFP41002 786 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 ETV4P43268 484 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 INHBEP58166 350 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 CDK18Q07002 472 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 MGAT5Q09328 741 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 SLC10A2Q12908 348 aaPredicted RBP10.98□□□□□ -0.65
APLF-204ENST00000471727 FSCN1Q16658 493 aaKnown RBP10.98□□□□□ -0.65
APLF-204ENST00000471727 INTS6LQ5JSJ4 861 aaKnown RBP10.98□□□□□ -0.65
APLF-204ENST00000471727 ANKRD20A2Q5SQ80 823 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 ANKRD20A1Q5TYW2 823 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 ANKRD20A3Q5VUR7 823 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 ATG16L1Q676U5 607 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 STEAP4Q687X5 459 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 LRRC8BQ6P9F7 803 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 OTOAQ7RTW8 1153 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 OSTM1Q86WC4 334 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 CTAGE3PQ8IX95 158 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 ZNF276Q8N554 614 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 PPM1NQ8N819 430 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 ACMSDQ8TDX5 336 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 CLEC4CQ8WTT0 213 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 CDKL2Q92772 493 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 WNT8BQ93098 351 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 TTC17Q96AE7 1141 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 APBA2Q99767 749 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 CNGB3Q9NQW8 809 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 CPA4Q9UI42 421 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 GRID1Q9ULK0 1009 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 RPL26L1Q9UNX3 145 aaKnown RBP10.98□□□□□ -0.65
APLF-204ENST00000471727 GIT1Q9Y2X7 761 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 MTO1Q9Y2Z2 717 aaKnown RBP10.98□□□□□ -0.65
APLF-204ENST00000471727 TRPV2Q9Y5S1 764 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 SDR42E2A6NKP2 422 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 TRIM49D1C9J1S8 452 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 MTSS1O43312 755 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 DUSP11O75319 330 aaKnown RBP10.98□□□□□ -0.65
APLF-204ENST00000471727 ALDH1A2O94788 518 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 METTL18O95568 372 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 ATP6V1G2O95670 118 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 PYGBP11216 843 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 NEFHP12036 1026 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 AMPD1P23109 780 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 NRLP54845 237 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 MRPS6P82932 125 aaKnown RBP10.98□□□□□ -0.65
APLF-204ENST00000471727 PURAQ00577 322 aaKnown RBP10.98□□□□□ -0.65
APLF-204ENST00000471727 DEUP1Q05D60 604 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 SOX4Q06945 474 aaPredicted RBP10.98□□□□□ -0.65
APLF-204ENST00000471727 ADIGQ0VDE8 80 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 SCAPQ12770 1279 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 SF3A3Q12874 501 aaKnown RBP eCLIP10.98□□□□□ -0.65
APLF-204ENST00000471727 PRKD1Q15139 912 aaPredicted RBP10.98□□□□□ -0.65
APLF-204ENST00000471727 GPR162Q16538 588 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 ARL13BQ3SXY8 428 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 DCAF6Q58WW2 860 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 UNC5AQ6ZN44 842 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 RPAINQ86UA6 219 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 FAM228AQ86W67 206 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 CCDC185Q8N715 623 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 RNF139Q8WU17 664 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 PGAP3Q96FM1 320 aaPredicted RBP10.98□□□□□ -0.65
APLF-204ENST00000471727 SENP8Q96LD8 212 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 MTG1Q9BT17 334 aaPredicted RBP10.98□□□□□ -0.65
APLF-204ENST00000471727 MED10Q9BTT4 135 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 TRIM62Q9BVG3 475 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 TSSK1BQ9BXA7 367 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms