RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 HARS2P49590 506 aaKnown RBP20.57■□□□□ 0.88
HDAC7-220ENST00000471235 GSCP56915 257 aaPredicted RBP20.57■□□□□ 0.88
HDAC7-220ENST00000471235 AMPD2Q01433 879 aa20.57■□□□□ 0.88
HDAC7-220ENST00000471235 FZD5Q13467 585 aa20.57■□□□□ 0.88
HDAC7-220ENST00000471235 TDRD12Q587J7 1177 aaKnown RBP20.57■□□□□ 0.88
HDAC7-220ENST00000471235 OTUD1Q5VV17 481 aaPredicted RBP20.57■□□□□ 0.88
HDAC7-220ENST00000471235 NUGGCQ68CJ6 796 aa20.57■□□□□ 0.88
HDAC7-220ENST00000471235 TRNP1Q6NT89 227 aa20.57■□□□□ 0.88
HDAC7-220ENST00000471235 C12orf40Q86WS4 652 aa20.57■□□□□ 0.88
HDAC7-220ENST00000471235 SLC39A13Q96H72 371 aa20.57■□□□□ 0.88
HDAC7-220ENST00000471235 NELL2Q99435 816 aa20.57■□□□□ 0.88
HDAC7-220ENST00000471235 TRIM5Q9C035 493 aa20.57■□□□□ 0.88
HDAC7-220ENST00000471235 METTL5Q9NRN9 209 aaKnown RBP20.57■□□□□ 0.88
HDAC7-220ENST00000471235 TAS2R14Q9NYV8 317 aa20.57■□□□□ 0.88
HDAC7-220ENST00000471235 ADAM22Q9P0K1 906 aa20.57■□□□□ 0.88
HDAC7-220ENST00000471235 MARK1Q9P0L2 795 aa20.57■□□□□ 0.88
HDAC7-220ENST00000471235 DOCK4Q8N1I0 1966 aa20.57■□□□□ 0.88
HDAC7-220ENST00000471235 MYO18AQ92614 2054 aaKnown RBP20.57■□□□□ 0.88
HDAC7-220ENST00000471235 DDX3XO00571 662 aaKnown RBP eCLIP20.56■□□□□ 0.88
HDAC7-220ENST00000471235 TRDMT1O14717 391 aaKnown RBP20.56■□□□□ 0.88
HDAC7-220ENST00000471235 LATS1O95835 1130 aa20.56■□□□□ 0.88
HDAC7-220ENST00000471235 CALB1P05937 261 aa20.56■□□□□ 0.88
HDAC7-220ENST00000471235 NOS2P35228 1153 aa20.56■□□□□ 0.88
HDAC7-220ENST00000471235 MATKP42679 507 aa20.56■□□□□ 0.88
HDAC7-220ENST00000471235 RNASE9P60153 205 aaKnown RBP20.56■□□□□ 0.88
HDAC7-220ENST00000471235 CDK17Q00537 523 aa20.56■□□□□ 0.88
HDAC7-220ENST00000471235 GAD2Q05329 585 aa20.56■□□□□ 0.88
HDAC7-220ENST00000471235 EIF4EBP2Q13542 120 aaPredicted RBP20.56■□□□□ 0.88
HDAC7-220ENST00000471235 TMEM196Q5HYL7 178 aa20.56■□□□□ 0.88
HDAC7-220ENST00000471235 ACAD10Q6JQN1 1059 aa20.56■□□□□ 0.88
HDAC7-220ENST00000471235 FSTL4Q6MZW2 842 aa20.56■□□□□ 0.88
HDAC7-220ENST00000471235 PHLDB2Q86SQ0 1253 aa20.56■□□□□ 0.88
HDAC7-220ENST00000471235 CD101Q93033 1021 aa20.56■□□□□ 0.88
HDAC7-220ENST00000471235 CLDN23Q96B33 292 aa20.56■□□□□ 0.88
HDAC7-220ENST00000471235 P2RY11Q96G91 374 aa20.56■□□□□ 0.88
HDAC7-220ENST00000471235 P2RY13Q9BPV8 354 aa20.56■□□□□ 0.88
HDAC7-220ENST00000471235 ADAM33Q9BZ11 813 aa20.56■□□□□ 0.88
HDAC7-220ENST00000471235 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.56■□□□□ 0.88
HDAC7-220ENST00000471235 TMEM59LQ9UK28 342 aa20.56■□□□□ 0.88
HDAC7-220ENST00000471235 CACNA1IQ9P0X4 2223 aa20.55■□□□□ 0.88
HDAC7-220ENST00000471235 CHRNB1P11230 501 aa20.55■□□□□ 0.88
HDAC7-220ENST00000471235 FLT3P36888 993 aa20.55■□□□□ 0.88
HDAC7-220ENST00000471235 C1QBPQ07021 282 aaKnown RBP20.55■□□□□ 0.88
HDAC7-220ENST00000471235 ANO4Q32M45 955 aa20.55■□□□□ 0.88
HDAC7-220ENST00000471235 TPGS1Q6ZTW0 290 aa20.55■□□□□ 0.88
HDAC7-220ENST00000471235 UNC45BQ8IWX7 931 aa20.55■□□□□ 0.88
HDAC7-220ENST00000471235 ETFBKMTQ8IXQ9 262 aa20.55■□□□□ 0.88
HDAC7-220ENST00000471235 CPXM2Q8N436 756 aa20.55■□□□□ 0.88
HDAC7-220ENST00000471235 NPY6RQ99463 290 aa20.55■□□□□ 0.88
HDAC7-220ENST00000471235 FBRSL1Q9HCM7 1045 aaKnown RBP20.55■□□□□ 0.88
HDAC7-220ENST00000471235 RBM12Q9NTZ6 932 aaKnown RBP20.55■□□□□ 0.88
HDAC7-220ENST00000471235 DDIT4Q9NX09 232 aa20.55■□□□□ 0.88
HDAC7-220ENST00000471235 WDR35Q9P2L0 1181 aa20.55■□□□□ 0.88
HDAC7-220ENST00000471235 STOML2Q9UJZ1 356 aa20.55■□□□□ 0.88
HDAC7-220ENST00000471235 FANCMQ8IYD8 2048 aa20.54■□□□□ 0.88
HDAC7-220ENST00000471235 SYNJ2BP-COX16A0A087WUM0 186 aa20.54■□□□□ 0.88
HDAC7-220ENST00000471235 NEDD8-MDP1E9PL57 170 aa20.54■□□□□ 0.88
HDAC7-220ENST00000471235 GJB6O95452 261 aa20.54■□□□□ 0.88
HDAC7-220ENST00000471235 SERPING1P05155 500 aa20.54■□□□□ 0.88
HDAC7-220ENST00000471235 PLEKP08567 350 aaPredicted RBP20.54■□□□□ 0.88
HDAC7-220ENST00000471235 TFE3P19532 575 aaPredicted RBP20.54■□□□□ 0.88
HDAC7-220ENST00000471235 CHKAP35790 457 aa20.54■□□□□ 0.88
HDAC7-220ENST00000471235 SLC6A11P48066 632 aa20.54■□□□□ 0.88
HDAC7-220ENST00000471235 SULT1E1P49888 294 aa20.54■□□□□ 0.88
HDAC7-220ENST00000471235 GALK1P51570 392 aa20.54■□□□□ 0.88
HDAC7-220ENST00000471235 CCINQ13939 588 aa20.54■□□□□ 0.88
HDAC7-220ENST00000471235 LRRC32Q14392 662 aa20.54■□□□□ 0.88
HDAC7-220ENST00000471235 TMC6Q7Z403 805 aa20.54■□□□□ 0.88
HDAC7-220ENST00000471235 BBS2Q9BXC9 721 aa20.54■□□□□ 0.88
HDAC7-220ENST00000471235 RRN3Q9NYV6 651 aa20.54■□□□□ 0.88
HDAC7-220ENST00000471235 COX16Q9P0S2 106 aa20.54■□□□□ 0.88
HDAC7-220ENST00000471235 CALCOCO1Q9P1Z2 691 aa20.54■□□□□ 0.88
HDAC7-220ENST00000471235 STAP1Q9ULZ2 295 aa20.54■□□□□ 0.88
HDAC7-220ENST00000471235 TCRBV5S1A1TA0A578 114 aa20.53■□□□□ 0.88
HDAC7-220ENST00000471235 TMCO5BA8MYB1 307 aa20.53■□□□□ 0.88
HDAC7-220ENST00000471235 GFRA2O00451 464 aa20.53■□□□□ 0.88
HDAC7-220ENST00000471235 NCAM2O15394 837 aa20.53■□□□□ 0.88
HDAC7-220ENST00000471235 CACNG3O60359 315 aa20.53■□□□□ 0.88
HDAC7-220ENST00000471235 ACSL4O60488 711 aa20.53■□□□□ 0.88
HDAC7-220ENST00000471235 MOCS2O96007 188 aaPredicted RBP20.53■□□□□ 0.88
HDAC7-220ENST00000471235 EGFP01133 1207 aa20.53■□□□□ 0.88
HDAC7-220ENST00000471235 APOEP02649 317 aa20.53■□□□□ 0.88
HDAC7-220ENST00000471235 TYRP14679 529 aa20.53■□□□□ 0.88
HDAC7-220ENST00000471235 HNRNPH3P31942 346 aaKnown RBP20.53■□□□□ 0.88
HDAC7-220ENST00000471235 EIF2DP41214 584 aaKnown RBP20.53■□□□□ 0.88
HDAC7-220ENST00000471235 MAGEA9P43362 315 aa20.53■□□□□ 0.88
HDAC7-220ENST00000471235 RPS9P46781 194 aaKnown RBP20.53■□□□□ 0.88
HDAC7-220ENST00000471235 KDSRQ06136 332 aa20.53■□□□□ 0.88
HDAC7-220ENST00000471235 GRSF1Q12849 480 aaKnown RBP eCLIP20.53■□□□□ 0.88
HDAC7-220ENST00000471235 ARID5BQ14865 1188 aa20.53■□□□□ 0.88
HDAC7-220ENST00000471235 FAM133BQ5BKY9 247 aaKnown RBP20.53■□□□□ 0.88
HDAC7-220ENST00000471235 ZC3H12AQ5D1E8 599 aaKnown RBP20.53■□□□□ 0.88
HDAC7-220ENST00000471235 NADSYN1Q6IA69 706 aa20.53■□□□□ 0.88
HDAC7-220ENST00000471235 PPP1R2P3Q6NXS1 205 aa20.53■□□□□ 0.88
HDAC7-220ENST00000471235 ARCQ7LC44 396 aa20.53■□□□□ 0.88
HDAC7-220ENST00000471235 DNAAF5Q86Y56 855 aa20.53■□□□□ 0.88
HDAC7-220ENST00000471235 MCOLN2Q8IZK6 566 aa20.53■□□□□ 0.88
HDAC7-220ENST00000471235 PHTF2Q8N3S3 785 aa20.53■□□□□ 0.88
HDAC7-220ENST00000471235 EMC1Q8N766 993 aa20.53■□□□□ 0.88
HDAC7-220ENST00000471235 C3orf20Q8ND61 904 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms