RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 BARX2Q9UMQ3 279 aaPredicted RBP5.93□□□□□ -1.46
HDAC8-216ENST00000470998 UBQLN1Q9UMX0 589 aaKnown RBP5.93□□□□□ -1.46
HDAC8-216ENST00000470998 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.93□□□□□ -1.46
HDAC8-216ENST00000470998 SHOC2Q9UQ13 582 aa5.93□□□□□ -1.46
HDAC8-216ENST00000470998 DRG1Q9Y295 367 aaKnown RBP5.93□□□□□ -1.46
HDAC8-216ENST00000470998 STARD13Q9Y3M8 1113 aa5.93□□□□□ -1.46
HDAC8-216ENST00000470998 TELO2Q9Y4R8 837 aa5.93□□□□□ -1.46
HDAC8-216ENST00000470998 A0A087WZ62 844 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 CFAP69A5D8W1 941 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 ZSCAN5CA6NGD5 496 aaPredicted RBP5.92□□□□□ -1.46
HDAC8-216ENST00000470998 O00370 1275 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 RNF8O76064 485 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 KRT14P02533 472 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 ITGAVP06756 1048 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 FAM153BP0C7A2 387 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 LINC00271P0C7V0 271 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 KRT3P12035 628 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 CD19P15391 556 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 TSHRP16473 764 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 HOXB4P17483 251 aaPredicted RBP5.92□□□□□ -1.46
HDAC8-216ENST00000470998 ARF4P18085 180 aaPredicted RBP5.92□□□□□ -1.46
HDAC8-216ENST00000470998 CYP3A5P20815 502 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 CD52P31358 61 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 CTNNB1P35222 781 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 TNFSF9P41273 254 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 MARCKSL1P49006 195 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 KCNQ1P51787 676 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 CRYBB1P53674 252 aaPredicted RBP5.92□□□□□ -1.46
HDAC8-216ENST00000470998 RNASE9P60153 205 aaKnown RBP5.92□□□□□ -1.46
HDAC8-216ENST00000470998 TFF2Q03403 129 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 KRT17Q04695 432 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 UBE3AQ05086 875 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 ZNF844Q08AG5 666 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 TFDP2Q14188 446 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 BTG3Q14201 252 aaPredicted RBP5.92□□□□□ -1.46
HDAC8-216ENST00000470998 RASA2Q15283 850 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 TAZQ16635 292 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 WDR72Q3MJ13 1102 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 KRT71Q3SY84 523 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 FAM153CQ494X1 144 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 TFDP3Q5H9I0 405 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 PERM1Q5SV97 790 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 EEF1DP3Q658K8 133 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 LMBRD2Q68DH5 695 aaPredicted RBP5.92□□□□□ -1.46
HDAC8-216ENST00000470998 LCLAT1Q6UWP7 414 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 ZDHHC24Q6UX98 284 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 C4orf22Q6V702 233 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 C8orf86Q6ZUL3 223 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 SLC24A5Q71RS6 500 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 B4GALNT4Q76KP1 1039 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 SPRED2Q7Z698 418 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 CCDC50Q8IVM0 306 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 MAP7D3Q8IWC1 876 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 OR13H1Q8NG92 308 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 SPATA18Q8TC71 538 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 FBXO25Q8TCJ0 367 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 TEKT4Q8WW24 435 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 P3H4Q92791 437 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 CENPTQ96BT3 561 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 MCRS1Q96EZ8 462 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 HPDLQ96IR7 371 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 SNX27Q96L92 541 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 SERPINB12Q96P63 405 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 FDXACB1Q9BRP7 624 aaPredicted RBP5.92□□□□□ -1.46
HDAC8-216ENST00000470998 NT5C1AQ9BXI3 368 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 OSBPL7Q9BZF2 842 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 FAM49AQ9H0Q0 323 aaPredicted RBP5.92□□□□□ -1.46
HDAC8-216ENST00000470998 SUV39H2Q9H5I1 410 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 ELAC1Q9H777 363 aaKnown RBP5.92□□□□□ -1.46
HDAC8-216ENST00000470998 SYNCQ9H7C4 482 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 AGO3Q9H9G7 860 aaKnown RBP5.92□□□□□ -1.46
HDAC8-216ENST00000470998 PCDH9Q9HC56 1237 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 ERVK-5Q9HDB9 667 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 RGS18Q9NS28 235 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 ASNSD1Q9NWL6 643 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 CNTN3Q9P232 1028 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 PRKAG3Q9UGI9 489 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 FETUBQ9UGM5 382 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 ASIC3Q9UHC3 531 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 FAM153AQ9UHL3 310 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 SIX4Q9UIU6 781 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 PADI3Q9ULW8 664 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 ACTL7BQ9Y614 415 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 NFS1Q9Y697 457 aa5.92□□□□□ -1.46
HDAC8-216ENST00000470998 TRIP12Q14669 1992 aaPredicted RBP5.92□□□□□ -1.46
HDAC8-216ENST00000470998 ARHGEF37A1IGU5 675 aa5.91□□□□□ -1.46
HDAC8-216ENST00000470998 LACTBL1A8MY62 500 aa5.91□□□□□ -1.46
HDAC8-216ENST00000470998 J3QW42 95 aa5.91□□□□□ -1.46
HDAC8-216ENST00000470998 M0QYV0 167 aa5.91□□□□□ -1.46
HDAC8-216ENST00000470998 EBAG9O00559 213 aa5.91□□□□□ -1.46
HDAC8-216ENST00000470998 B4GALT5O43286 388 aa5.91□□□□□ -1.46
HDAC8-216ENST00000470998 RIPK2O43353 540 aa5.91□□□□□ -1.46
HDAC8-216ENST00000470998 LIASO43766 372 aa5.91□□□□□ -1.46
HDAC8-216ENST00000470998 SMNDC1O75940 238 aaKnown RBP eCLIP5.91□□□□□ -1.461e-16■■■■■ 35
HDAC8-216ENST00000470998 CST3P01034 146 aaPredicted RBP5.91□□□□□ -1.46
HDAC8-216ENST00000470998 KRT1P04264 644 aa5.91□□□□□ -1.46
HDAC8-216ENST00000470998 ITGB3P05106 788 aa5.91□□□□□ -1.46
HDAC8-216ENST00000470998 NFICP08651 508 aa5.91□□□□□ -1.46
HDAC8-216ENST00000470998 KRT19P08727 400 aa5.91□□□□□ -1.46
HDAC8-216ENST00000470998 RALAP11233 206 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms