RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 NIF3L1Q9GZT8 377 aa14.56□□□□□ -0.08
SEMA3F-208ENST00000470737 ITM2CQ9NQX7 267 aa14.56□□□□□ -0.08
SEMA3F-208ENST00000470737 USP36Q9P275 1121 aaKnown RBP14.56□□□□□ -0.08
SEMA3F-208ENST00000470737 THAP10Q9P2Z0 257 aaPredicted RBP14.56□□□□□ -0.08
SEMA3F-208ENST00000470737 STRIP2Q9ULQ0 834 aa14.56□□□□□ -0.08
SEMA3F-208ENST00000470737 ATP6V1DQ9Y5K8 247 aa14.56□□□□□ -0.08
SEMA3F-208ENST00000470737 WDFY3Q8IZQ1 3526 aa14.55□□□□□ -0.08
SEMA3F-208ENST00000470737 CILPO75339 1184 aa14.55□□□□□ -0.08
SEMA3F-208ENST00000470737 PENKP01210 267 aaPredicted RBP14.55□□□□□ -0.08
SEMA3F-208ENST00000470737 MYL1P05976 194 aa14.55□□□□□ -0.08
SEMA3F-208ENST00000470737 CORO1AP31146 461 aaKnown RBP14.55□□□□□ -0.08
SEMA3F-208ENST00000470737 IL12RB1P42701 662 aa14.55□□□□□ -0.08
SEMA3F-208ENST00000470737 GCLMP48507 274 aa14.55□□□□□ -0.08
SEMA3F-208ENST00000470737 SLC8A3P57103 927 aa14.55□□□□□ -0.08
SEMA3F-208ENST00000470737 PKP1Q13835 747 aa14.55□□□□□ -0.08
SEMA3F-208ENST00000470737 EIF4HQ15056 248 aaKnown RBP14.55□□□□□ -0.08
SEMA3F-208ENST00000470737 GEN1Q17RS7 908 aa14.55□□□□□ -0.08
SEMA3F-208ENST00000470737 PPP1R26Q5T8A7 1209 aaPredicted RBP14.55□□□□□ -0.08
SEMA3F-208ENST00000470737 DCAF12L1Q5VU92 463 aa14.55□□□□□ -0.08
SEMA3F-208ENST00000470737 FYB2Q5VWT5 728 aa14.55□□□□□ -0.08
SEMA3F-208ENST00000470737 IL27RAQ6UWB1 636 aa14.55□□□□□ -0.08
SEMA3F-208ENST00000470737 PROSER1Q86XN7 944 aa14.55□□□□□ -0.08
SEMA3F-208ENST00000470737 TMPRSS6Q8IU80 811 aa14.55□□□□□ -0.08
SEMA3F-208ENST00000470737 TTC39CQ8N584 583 aa14.55□□□□□ -0.08
SEMA3F-208ENST00000470737 SETD7Q8WTS6 366 aaKnown RBP14.55□□□□□ -0.08
SEMA3F-208ENST00000470737 DNASE2BQ8WZ79 361 aa14.55□□□□□ -0.08
SEMA3F-208ENST00000470737 CIPCQ9C0C6 399 aa14.55□□□□□ -0.08
SEMA3F-208ENST00000470737 MKRN2Q9H000 416 aaKnown RBP14.55□□□□□ -0.08
SEMA3F-208ENST00000470737 MMRN2Q9H8L6 949 aa14.55□□□□□ -0.08
SEMA3F-208ENST00000470737 USP25Q9UHP3 1055 aa14.55□□□□□ -0.08
SEMA3F-208ENST00000470737 RCOR1Q9UKL0 485 aa14.55□□□□□ -0.08
SEMA3F-208ENST00000470737 SPEGQ15772 3267 aa14.54□□□□□ -0.08
SEMA3F-208ENST00000470737 CKAP5Q14008 2032 aa14.54□□□□□ -0.08
SEMA3F-208ENST00000470737 BCAT2O15382 392 aaPredicted RBP14.54□□□□□ -0.08
SEMA3F-208ENST00000470737 ACTN4O43707 911 aaKnown RBP14.54□□□□□ -0.08
SEMA3F-208ENST00000470737 NR2F2P24468 414 aa14.54□□□□□ -0.08
SEMA3F-208ENST00000470737 MATKP42679 507 aa14.54□□□□□ -0.08
SEMA3F-208ENST00000470737 TPMTP51580 245 aa14.54□□□□□ -0.08
SEMA3F-208ENST00000470737 SCAPQ12770 1279 aa14.54□□□□□ -0.08
SEMA3F-208ENST00000470737 ZNF234Q14588 700 aa14.54□□□□□ -0.08
SEMA3F-208ENST00000470737 ZNF394Q53GI3 561 aa14.54□□□□□ -0.08
SEMA3F-208ENST00000470737 SERPINA13PQ6UXR4 307 aa14.54□□□□□ -0.08
SEMA3F-208ENST00000470737 SCD5Q86SK9 330 aa14.54□□□□□ -0.08
SEMA3F-208ENST00000470737 DENND1CQ8IV53 801 aa14.54□□□□□ -0.08
SEMA3F-208ENST00000470737 PNPLA1Q8N8W4 532 aa14.54□□□□□ -0.08
SEMA3F-208ENST00000470737 TAS1R2Q8TE23 839 aa14.54□□□□□ -0.08
SEMA3F-208ENST00000470737 DDI1Q8WTU0 396 aa14.54□□□□□ -0.08
SEMA3F-208ENST00000470737 HEXIM2Q96MH2 286 aaKnown RBP14.54□□□□□ -0.08
SEMA3F-208ENST00000470737 NUP58Q9BVL2 599 aa14.54□□□□□ -0.08
SEMA3F-208ENST00000470737 GAREM1Q9H706 876 aa14.54□□□□□ -0.08
SEMA3F-208ENST00000470737 ELOVL2Q9NXB9 296 aa14.54□□□□□ -0.08
SEMA3F-208ENST00000470737 MARCH2Q9P0N8 246 aa14.54□□□□□ -0.08
SEMA3F-208ENST00000470737 TRAF3IP3Q9Y228 551 aa14.54□□□□□ -0.08
SEMA3F-208ENST00000470737 ZDHHC9Q9Y397 364 aa14.54□□□□□ -0.08
SEMA3F-208ENST00000470737 USP3Q9Y6I4 520 aa14.54□□□□□ -0.08
SEMA3F-208ENST00000470737 SLC12A8A0AV02 714 aa14.53□□□□□ -0.08
SEMA3F-208ENST00000470737 KCNJ18B7U540 433 aa14.53□□□□□ -0.08
SEMA3F-208ENST00000470737 TIMM44O43615 452 aa14.53□□□□□ -0.08
SEMA3F-208ENST00000470737 KLKB1P03952 638 aa14.53□□□□□ -0.08
SEMA3F-208ENST00000470737 EPHX1P07099 455 aa14.53□□□□□ -0.08
SEMA3F-208ENST00000470737 ZNF883P0CG24 379 aa14.53□□□□□ -0.08
SEMA3F-208ENST00000470737 TRIM49P0CI25 452 aa14.53□□□□□ -0.08
SEMA3F-208ENST00000470737 TRIM49CP0CI26 452 aa14.53□□□□□ -0.08
SEMA3F-208ENST00000470737 HOXB3P14651 431 aaPredicted RBP14.53□□□□□ -0.08
SEMA3F-208ENST00000470737 RPL13P26373 211 aaKnown RBP14.53□□□□□ -0.08
SEMA3F-208ENST00000470737 PSMC2P35998 433 aaKnown RBP14.53□□□□□ -0.08
SEMA3F-208ENST00000470737 ACAP1Q15027 740 aa14.53□□□□□ -0.08
SEMA3F-208ENST00000470737 C1orf220Q5T0J3 134 aa14.53□□□□□ -0.08
SEMA3F-208ENST00000470737 CACUL1Q86Y37 369 aa14.53□□□□□ -0.08
SEMA3F-208ENST00000470737 FAM186BQ8IYM0 893 aa14.53□□□□□ -0.08
SEMA3F-208ENST00000470737 CPXM2Q8N436 756 aa14.53□□□□□ -0.08
SEMA3F-208ENST00000470737 SNX19Q92543 992 aa14.53□□□□□ -0.08
SEMA3F-208ENST00000470737 SLC2A11Q9BYW1 496 aa14.53□□□□□ -0.08
SEMA3F-208ENST00000470737 CCDC86Q9H6F5 360 aaKnown RBP14.53□□□□□ -0.08
SEMA3F-208ENST00000470737 APOBEC3GQ9HC16 384 aaKnown RBP14.53□□□□□ -0.08
SEMA3F-208ENST00000470737 TM7SF3Q9NS93 570 aa14.53□□□□□ -0.08
SEMA3F-208ENST00000470737 AGO1Q9UL18 857 aaKnown RBP14.53□□□□□ -0.08
SEMA3F-208ENST00000470737 ADAMTS20P59510 1910 aa14.53□□□□□ -0.08
SEMA3F-208ENST00000470737 ANKRD11Q6UB99 2663 aaPredicted RBP14.52□□□□□ -0.08
SEMA3F-208ENST00000470737 METTL12A8MUP2 240 aa14.52□□□□□ -0.09
SEMA3F-208ENST00000470737 YWHAGP61981 247 aaKnown RBP eCLIP14.52□□□□□ -0.09
SEMA3F-208ENST00000470737 ENPEPQ07075 957 aa14.52□□□□□ -0.09
SEMA3F-208ENST00000470737 ENPP2Q13822 863 aa14.52□□□□□ -0.09
SEMA3F-208ENST00000470737 GLRX5Q86SX6 157 aa14.52□□□□□ -0.09
SEMA3F-208ENST00000470737 FAM124AQ86V42 546 aa14.52□□□□□ -0.09
SEMA3F-208ENST00000470737 PLD4Q96BZ4 506 aa14.52□□□□□ -0.09
SEMA3F-208ENST00000470737 PIWIL1Q96J94 861 aaKnown RBP14.52□□□□□ -0.09
SEMA3F-208ENST00000470737 PCED1AQ9H1Q7 454 aa14.52□□□□□ -0.09
SEMA3F-208ENST00000470737 TMEM8AQ9HCN3 771 aa14.52□□□□□ -0.09
SEMA3F-208ENST00000470737 OLA1Q9NTK5 396 aaKnown RBP14.52□□□□□ -0.09
SEMA3F-208ENST00000470737 EIF2B4Q9UI10 523 aaKnown RBP14.52□□□□□ -0.09
SEMA3F-208ENST00000470737 PCOLCE2Q9UKZ9 415 aa14.52□□□□□ -0.09
SEMA3F-208ENST00000470737 DMXL2Q8TDJ6 3036 aa14.52□□□□□ -0.09
SEMA3F-208ENST00000470737 A0A1B0GVL5 298 aa14.51□□□□□ -0.09
SEMA3F-208ENST00000470737 TAF4O00268 1085 aa14.51□□□□□ -0.09
SEMA3F-208ENST00000470737 FLRT2O43155 660 aa14.51□□□□□ -0.09
SEMA3F-208ENST00000470737 PFKFB1P16118 471 aa14.51□□□□□ -0.09
SEMA3F-208ENST00000470737 PRKCHP24723 683 aa14.51□□□□□ -0.09
SEMA3F-208ENST00000470737 HARS2P49590 506 aaKnown RBP14.51□□□□□ -0.09
SEMA3F-208ENST00000470737 COPAP53621 1224 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms