RNA–Protein interactions for RNA: ENST00000470495.1

HOXB3-205, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-205ENST00000470495 NSUN2Q08J23 767 aaKnown RBP eCLIP17.07■□□□□ 0.32
HOXB3-205ENST00000470495 SLC10A6Q3KNW5 377 aa17.07■□□□□ 0.32
HOXB3-205ENST00000470495 FBXO47Q5MNV8 452 aa17.07■□□□□ 0.32
HOXB3-205ENST00000470495 SNX32Q86XE0 403 aa17.07■□□□□ 0.32
HOXB3-205ENST00000470495 SERPINB12Q96P63 405 aa17.07■□□□□ 0.32
HOXB3-205ENST00000470495 NXF3Q9H4D5 531 aaKnown RBP17.07■□□□□ 0.32
HOXB3-205ENST00000470495 NENFQ9UMX5 172 aa17.07■□□□□ 0.32
HOXB3-205ENST00000470495 SMIM10L2AP0DMW4 78 aa17.07■□□□□ 0.32
HOXB3-205ENST00000470495 SMIM10L2BP0DMW5 78 aa17.07■□□□□ 0.32
HOXB3-205ENST00000470495 CCDC130P13994 396 aa17.07■□□□□ 0.32
HOXB3-205ENST00000470495 SULT1E1P49888 294 aa17.07■□□□□ 0.32
HOXB3-205ENST00000470495 CPT1AP50416 773 aa17.07■□□□□ 0.32
HOXB3-205ENST00000470495 AP1B1Q10567 949 aa17.07■□□□□ 0.32
HOXB3-205ENST00000470495 LBRQ14739 615 aaKnown RBP17.07■□□□□ 0.32
HOXB3-205ENST00000470495 HEATR6Q6AI08 1181 aaKnown RBP17.07■□□□□ 0.32
HOXB3-205ENST00000470495 IQSEC1Q6DN90 963 aa17.07■□□□□ 0.32
HOXB3-205ENST00000470495 NPNTQ6UXI9 565 aa17.07■□□□□ 0.32
HOXB3-205ENST00000470495 C15orf39Q6ZRI6 1047 aa17.07■□□□□ 0.32
HOXB3-205ENST00000470495 UPF1Q92900 1129 aaKnown RBP eCLIP17.07■□□□□ 0.32
HOXB3-205ENST00000470495 TBC1D23Q9NUY8 699 aa17.07■□□□□ 0.32
HOXB3-205ENST00000470495 SRCAPQ6ZRS2 3230 aa17.07■□□□□ 0.32
HOXB3-205ENST00000470495 BANF1O75531 89 aa17.07■□□□□ 0.32
HOXB3-205ENST00000470495 ASPAP45381 313 aa17.07■□□□□ 0.32
HOXB3-205ENST00000470495 BLMHQ13867 455 aa17.07■□□□□ 0.32
HOXB3-205ENST00000470495 SPARCL1Q14515 664 aa17.07■□□□□ 0.32
HOXB3-205ENST00000470495 WLSQ5T9L3 541 aa17.07■□□□□ 0.32
HOXB3-205ENST00000470495 ELMSAN1Q6PJG2 1045 aa17.07■□□□□ 0.32
HOXB3-205ENST00000470495 MAB21L3Q8N8X9 362 aa17.07■□□□□ 0.32
HOXB3-205ENST00000470495 BRI3BPQ8WY22 251 aa17.07■□□□□ 0.32
HOXB3-205ENST00000470495 TTC17Q96AE7 1141 aa17.07■□□□□ 0.32
HOXB3-205ENST00000470495 LTBP1Q14766 1721 aa17.06■□□□□ 0.32
HOXB3-205ENST00000470495 CCNFP41002 786 aa17.06■□□□□ 0.32
HOXB3-205ENST00000470495 HDAC4P56524 1084 aa17.06■□□□□ 0.32
HOXB3-205ENST00000470495 DUSP28Q4G0W2 176 aa17.06■□□□□ 0.32
HOXB3-205ENST00000470495 SCARA3Q6AZY7 606 aa17.06■□□□□ 0.32
HOXB3-205ENST00000470495 TUBA3EQ6PEY2 450 aa17.06■□□□□ 0.32
HOXB3-205ENST00000470495 FAM131BQ86XD5 332 aa17.06■□□□□ 0.32
HOXB3-205ENST00000470495 TWNKQ96RR1 684 aa17.06■□□□□ 0.32
HOXB3-205ENST00000470495 ATAD3AQ9NVI7 634 aa17.06■□□□□ 0.32
HOXB3-205ENST00000470495 NAALADL1Q9UQQ1 740 aa17.06■□□□□ 0.32
HOXB3-205ENST00000470495 SPEF1Q9Y4P9 236 aa17.06■□□□□ 0.32
HOXB3-205ENST00000470495 QSER1Q2KHR3 1735 aa17.06■□□□□ 0.32
HOXB3-205ENST00000470495 IGKV6D-21A0A0A0MT36 114 aa17.06■□□□□ 0.32
HOXB3-205ENST00000470495 DNALI1O14645 258 aaPredicted RBP17.06■□□□□ 0.32
HOXB3-205ENST00000470495 CNMDO75829 334 aa17.06■□□□□ 0.32
HOXB3-205ENST00000470495 HMGCRP04035 888 aa17.06■□□□□ 0.32
HOXB3-205ENST00000470495 MMP3P08254 477 aa17.06■□□□□ 0.32
HOXB3-205ENST00000470495 KDELR1P24390 212 aa17.06■□□□□ 0.32
HOXB3-205ENST00000470495 COPS2P61201 443 aa17.06■□□□□ 0.32
HOXB3-205ENST00000470495 CNGA2Q16280 664 aa17.06■□□□□ 0.32
HOXB3-205ENST00000470495 PPIL6Q8IXY8 311 aa17.06■□□□□ 0.32
HOXB3-205ENST00000470495 DNAAF3Q8N9W5 541 aa17.06■□□□□ 0.32
HOXB3-205ENST00000470495 ZDHHC18Q9NUE0 388 aa17.06■□□□□ 0.32
HOXB3-205ENST00000470495 INHBEP58166 350 aa17.06■□□□□ 0.32
HOXB3-205ENST00000470495 AGAP9Q5VTM2 703 aa17.06■□□□□ 0.32
HOXB3-205ENST00000470495 FAM183BPQ6ZVS7 135 aa17.06■□□□□ 0.32
HOXB3-205ENST00000470495 PATL1Q86TB9 770 aaKnown RBP17.06■□□□□ 0.32
HOXB3-205ENST00000470495 METTL23Q86XA0 190 aa17.06■□□□□ 0.32
HOXB3-205ENST00000470495 GOLGA2P5Q9HBQ8 144 aa17.06■□□□□ 0.32
HOXB3-205ENST00000470495 TUBGCP4Q9UGJ1 667 aa17.06■□□□□ 0.32
HOXB3-205ENST00000470495 TSPAN1O60635 241 aa17.05■□□□□ 0.32
HOXB3-205ENST00000470495 SAT1P21673 171 aa17.05■□□□□ 0.32
HOXB3-205ENST00000470495 AUHQ13825 339 aaKnown RBP17.05■□□□□ 0.32
HOXB3-205ENST00000470495 TOMM20Q15388 145 aa17.05■□□□□ 0.32
HOXB3-205ENST00000470495 ZNF410Q86VK4 478 aa17.05■□□□□ 0.32
HOXB3-205ENST00000470495 CD101Q93033 1021 aa17.05■□□□□ 0.32
HOXB3-205ENST00000470495 ZNF304Q9HCX3 659 aa17.05■□□□□ 0.32
HOXB3-205ENST00000470495 ATPIF1Q9UII2 106 aa17.05■□□□□ 0.32
HOXB3-205ENST00000470495 hCG_1818297A0A087WSY0 165 aa17.05■□□□□ 0.32
HOXB3-205ENST00000470495 GOLGA8CPA6NN73 597 aa17.05■□□□□ 0.32
HOXB3-205ENST00000470495 IGF2BP3O00425 579 aaKnown RBP eCLIP17.05■□□□□ 0.32
HOXB3-205ENST00000470495 PRLP01236 227 aa17.05■□□□□ 0.32
HOXB3-205ENST00000470495 RNASELQ05823 741 aaKnown RBP17.05■□□□□ 0.32
HOXB3-205ENST00000470495 FAPQ12884 760 aa17.05■□□□□ 0.32
HOXB3-205ENST00000470495 BOLA3Q53S33 107 aa17.05■□□□□ 0.32
HOXB3-205ENST00000470495 SLC4A11Q8NBS3 891 aa17.05■□□□□ 0.32
HOXB3-205ENST00000470495 PRCCQ92733 491 aaPredicted RBP17.05■□□□□ 0.32
HOXB3-205ENST00000470495 MAML3Q96JK9 1138 aa17.05■□□□□ 0.32
HOXB3-205ENST00000470495 MRPL45Q9BRJ2 306 aaKnown RBP17.05■□□□□ 0.32
HOXB3-205ENST00000470495 KIAA1257Q9ULG3 409 aa17.05■□□□□ 0.32
HOXB3-205ENST00000470495 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.05■□□□□ 0.32
HOXB3-205ENST00000470495 TAF4O00268 1085 aa17.05■□□□□ 0.32
HOXB3-205ENST00000470495 ATP1A4Q13733 1029 aa17.05■□□□□ 0.32
HOXB3-205ENST00000470495 CCDC62Q6P9F0 684 aa17.05■□□□□ 0.32
HOXB3-205ENST00000470495 FBXO36Q8NEA4 188 aa17.05■□□□□ 0.32
HOXB3-205ENST00000470495 PGM2Q96G03 612 aa17.05■□□□□ 0.32
HOXB3-205ENST00000470495 SELENONQ9NZV5 590 aa17.05■□□□□ 0.32
HOXB3-205ENST00000470495 ECHS1P30084 290 aa17.04■□□□□ 0.32
HOXB3-205ENST00000470495 SSTR1P30872 391 aa17.04■□□□□ 0.32
HOXB3-205ENST00000470495 ARPP19P56211 112 aa17.04■□□□□ 0.32
HOXB3-205ENST00000470495 PPP1R26Q5T8A7 1209 aaPredicted RBP17.04■□□□□ 0.32
HOXB3-205ENST00000470495 RWDD4Q6NW29 188 aaKnown RBP17.04■□□□□ 0.32
HOXB3-205ENST00000470495 SLC2A14Q8TDB8 520 aa17.04■□□□□ 0.32
HOXB3-205ENST00000470495 KATNAL1Q9BW62 490 aa17.04■□□□□ 0.32
HOXB3-205ENST00000470495 B3GNT5Q9BYG0 378 aa17.04■□□□□ 0.32
HOXB3-205ENST00000470495 PDP2Q9P2J9 529 aa17.04■□□□□ 0.32
HOXB3-205ENST00000470495 STAP1Q9ULZ2 295 aa17.04■□□□□ 0.32
HOXB3-205ENST00000470495 LRCH4O75427 683 aa17.04■□□□□ 0.32
HOXB3-205ENST00000470495 CD48P09326 243 aa17.04■□□□□ 0.32
HOXB3-205ENST00000470495 NUDT17P0C025 328 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms