RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 GRIA4P48058 902 aa19.94■□□□□ 0.78
NCKIPSD-209ENST00000470006 CEBPZQ03701 1054 aaKnown RBP19.94■□□□□ 0.78
NCKIPSD-209ENST00000470006 Q6ZNB5 142 aa19.94■□□□□ 0.78
NCKIPSD-209ENST00000470006 TADA2BQ86TJ2 420 aa19.94■□□□□ 0.78
NCKIPSD-209ENST00000470006 XXYLT1Q8NBI6 393 aa19.94■□□□□ 0.78
NCKIPSD-209ENST00000470006 BAP1Q92560 729 aa19.94■□□□□ 0.78
NCKIPSD-209ENST00000470006 ELMO3Q96BJ8 720 aa19.94■□□□□ 0.78
NCKIPSD-209ENST00000470006 NMUR1Q9HB89 426 aa19.94■□□□□ 0.78
NCKIPSD-209ENST00000470006 NAGPAQ9UK23 515 aa19.94■□□□□ 0.78
NCKIPSD-209ENST00000470006 SCML2Q9UQR0 700 aa19.94■□□□□ 0.78
NCKIPSD-209ENST00000470006 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.94■□□□□ 0.78
NCKIPSD-209ENST00000470006 SRPRBQ9Y5M8 271 aaKnown RBP19.94■□□□□ 0.78
NCKIPSD-209ENST00000470006 STC2O76061 302 aa19.93■□□□□ 0.78
NCKIPSD-209ENST00000470006 FAM200BP0CF97 657 aa19.93■□□□□ 0.78
NCKIPSD-209ENST00000470006 TRIM21P19474 475 aaKnown RBP19.93■□□□□ 0.78
NCKIPSD-209ENST00000470006 CLDN6P56747 220 aa19.93■□□□□ 0.78
NCKIPSD-209ENST00000470006 C21orf59P57076 290 aa19.93■□□□□ 0.78
NCKIPSD-209ENST00000470006 ENPP2Q13822 863 aa19.93■□□□□ 0.78
NCKIPSD-209ENST00000470006 FYB2Q5VWT5 728 aa19.93■□□□□ 0.78
NCKIPSD-209ENST00000470006 ZNF843Q8N446 348 aa19.93■□□□□ 0.78
NCKIPSD-209ENST00000470006 PDILTQ8N807 584 aa19.93■□□□□ 0.78
NCKIPSD-209ENST00000470006 OR2T3Q8NH03 318 aa19.93■□□□□ 0.78
NCKIPSD-209ENST00000470006 AGPAT3Q9NRZ7 376 aa19.93■□□□□ 0.78
NCKIPSD-209ENST00000470006 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.93■□□□□ 0.78
NCKIPSD-209ENST00000470006 CKAP5Q14008 2032 aa19.93■□□□□ 0.78
NCKIPSD-209ENST00000470006 MUC22E2RYF6 1773 aaPredicted RBP19.93■□□□□ 0.78
NCKIPSD-209ENST00000470006 VPS37CA5D8V6 355 aaPredicted RBP19.92■□□□□ 0.78
NCKIPSD-209ENST00000470006 TLX3O43711 291 aaPredicted RBP19.92■□□□□ 0.78
NCKIPSD-209ENST00000470006 SEMA4FO95754 770 aa19.92■□□□□ 0.78
NCKIPSD-209ENST00000470006 PENKP01210 267 aaPredicted RBP19.92■□□□□ 0.78
NCKIPSD-209ENST00000470006 HOXD13P35453 343 aa19.92■□□□□ 0.78
NCKIPSD-209ENST00000470006 FNDC3BQ53EP0 1204 aaKnown RBP19.92■□□□□ 0.78
NCKIPSD-209ENST00000470006 GPRIN1Q7Z2K8 1008 aa19.92■□□□□ 0.78
NCKIPSD-209ENST00000470006 NELFCDQ8IXH7 590 aa19.92■□□□□ 0.78
NCKIPSD-209ENST00000470006 C12orf29Q8N999 325 aa19.92■□□□□ 0.78
NCKIPSD-209ENST00000470006 LSM14AQ8ND56 463 aaKnown RBP19.92■□□□□ 0.78
NCKIPSD-209ENST00000470006 DDI1Q8WTU0 396 aa19.92■□□□□ 0.78
NCKIPSD-209ENST00000470006 BIRC7Q96CA5 298 aa19.92■□□□□ 0.78
NCKIPSD-209ENST00000470006 P2RY11Q96G91 374 aa19.92■□□□□ 0.78
NCKIPSD-209ENST00000470006 BTBD1Q9H0C5 482 aa19.92■□□□□ 0.78
NCKIPSD-209ENST00000470006 SDCBP2Q9H190 292 aa19.92■□□□□ 0.78
NCKIPSD-209ENST00000470006 CSNK1G1Q9HCP0 422 aa19.92■□□□□ 0.78
NCKIPSD-209ENST00000470006 RASAL2Q9UJF2 1139 aa19.92■□□□□ 0.78
NCKIPSD-209ENST00000470006 CFAP46Q8IYW2 2715 aa19.92■□□□□ 0.78
NCKIPSD-209ENST00000470006 PTPRQQ9UMZ3 2332 aa19.92■□□□□ 0.78
NCKIPSD-209ENST00000470006 ENC1O14682 589 aa19.91■□□□□ 0.78
NCKIPSD-209ENST00000470006 KIF20AO95235 890 aa19.91■□□□□ 0.78
NCKIPSD-209ENST00000470006 LDOC1O95751 146 aaPredicted RBP19.91■□□□□ 0.78
NCKIPSD-209ENST00000470006 KLKB1P03952 638 aa19.91■□□□□ 0.78
NCKIPSD-209ENST00000470006 RALAP11233 206 aa19.91■□□□□ 0.78
NCKIPSD-209ENST00000470006 P4HA1P13674 534 aa19.91■□□□□ 0.78
NCKIPSD-209ENST00000470006 CORO1AP31146 461 aaKnown RBP19.91■□□□□ 0.78
NCKIPSD-209ENST00000470006 CASP4P49662 377 aa19.91■□□□□ 0.78
NCKIPSD-209ENST00000470006 NDST1P52848 882 aa19.91■□□□□ 0.78
NCKIPSD-209ENST00000470006 BCAT1P54687 386 aa19.91■□□□□ 0.78
NCKIPSD-209ENST00000470006 EIF4HQ15056 248 aaKnown RBP19.91■□□□□ 0.78
NCKIPSD-209ENST00000470006 KCNT1Q5JUK3 1230 aa19.91■□□□□ 0.78
NCKIPSD-209ENST00000470006 KLHDC10Q6PID8 442 aa19.91■□□□□ 0.78
NCKIPSD-209ENST00000470006 GPR155Q7Z3F1 870 aa19.91■□□□□ 0.78
NCKIPSD-209ENST00000470006 GATAD2AQ86YP4 633 aa19.91■□□□□ 0.78
NCKIPSD-209ENST00000470006 PIWIL1Q96J94 861 aaKnown RBP19.91■□□□□ 0.78
NCKIPSD-209ENST00000470006 CNDP2Q96KP4 475 aaKnown RBP19.91■□□□□ 0.78
NCKIPSD-209ENST00000470006 DCLK3Q9C098 648 aa19.91■□□□□ 0.78
NCKIPSD-209ENST00000470006 OSGEPQ9NPF4 335 aa19.91■□□□□ 0.78
NCKIPSD-209ENST00000470006 EIF3DO15371 548 aaKnown RBP eCLIP19.9■□□□□ 0.78
NCKIPSD-209ENST00000470006 TGFB1I1O43294 461 aa19.9■□□□□ 0.78
NCKIPSD-209ENST00000470006 TIMM44O43615 452 aa19.9■□□□□ 0.78
NCKIPSD-209ENST00000470006 DFNA5O60443 496 aa19.9■□□□□ 0.78
NCKIPSD-209ENST00000470006 DNTTP04053 509 aa19.9■□□□□ 0.78
NCKIPSD-209ENST00000470006 ABCB4P21439 1286 aa19.9■□□□□ 0.78
NCKIPSD-209ENST00000470006 CD27P26842 260 aa19.9■□□□□ 0.78
NCKIPSD-209ENST00000470006 CTSKP43235 329 aa19.9■□□□□ 0.78
NCKIPSD-209ENST00000470006 COG7P83436 770 aa19.9■□□□□ 0.78
NCKIPSD-209ENST00000470006 EFEMP1Q12805 493 aa19.9■□□□□ 0.78
NCKIPSD-209ENST00000470006 TARDBPQ13148 414 aaKnown RBP eCLIP19.9■□□□□ 0.78
NCKIPSD-209ENST00000470006 DNAJC3Q13217 504 aa19.9■□□□□ 0.78
NCKIPSD-209ENST00000470006 NCOA4Q13772 614 aa19.9■□□□□ 0.78
NCKIPSD-209ENST00000470006 RABEP1Q15276 862 aa19.9■□□□□ 0.78
NCKIPSD-209ENST00000470006 PRAMEF14Q5SWL7 426 aa19.9■□□□□ 0.78
NCKIPSD-209ENST00000470006 DENND1CQ8IV53 801 aa19.9■□□□□ 0.78
NCKIPSD-209ENST00000470006 GANCQ8TET4 914 aa19.9■□□□□ 0.78
NCKIPSD-209ENST00000470006 ACE2Q9BYF1 805 aaPredicted RBP19.9■□□□□ 0.78
NCKIPSD-209ENST00000470006 LRRC27Q9C0I9 530 aa19.9■□□□□ 0.78
NCKIPSD-209ENST00000470006 PLA2G4CQ9UP65 541 aa19.9■□□□□ 0.78
NCKIPSD-209ENST00000470006 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.9■□□□□ 0.78
NCKIPSD-209ENST00000470006 PCDHGA1Q9Y5H4 931 aa19.9■□□□□ 0.78
NCKIPSD-209ENST00000470006 PCDHA5Q9Y5H7 936 aa19.9■□□□□ 0.78
NCKIPSD-209ENST00000470006 A0A087X0B3 334 aa19.89■□□□□ 0.77
NCKIPSD-209ENST00000470006 FAM47DPA6NHR8 397 aa19.89■□□□□ 0.77
NCKIPSD-209ENST00000470006 J3QKU1 62 aa19.89■□□□□ 0.77
NCKIPSD-209ENST00000470006 CBX4O00257 560 aa19.89■□□□□ 0.77
NCKIPSD-209ENST00000470006 EXOC3O60645 756 aa19.89■□□□□ 0.77
NCKIPSD-209ENST00000470006 RFPL3O75679 317 aa19.89■□□□□ 0.77
NCKIPSD-209ENST00000470006 ITGAVP06756 1048 aa19.89■□□□□ 0.77
NCKIPSD-209ENST00000470006 NEFLP07196 543 aa19.89■□□□□ 0.77
NCKIPSD-209ENST00000470006 ASIC1P78348 528 aa19.89■□□□□ 0.77
NCKIPSD-209ENST00000470006 CFHR1Q03591 330 aa19.89■□□□□ 0.77
NCKIPSD-209ENST00000470006 BMT2Q1RMZ1 405 aa19.89■□□□□ 0.77
NCKIPSD-209ENST00000470006 ZNF366Q8N895 744 aa19.89■□□□□ 0.77
NCKIPSD-209ENST00000470006 ZNF507Q8TCN5 953 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms