RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 TMEM63BQ5T3F8 832 aa5.42□□□□□ -1.54
VPS8-219ENST00000469479 ANKRD54Q6NXT1 300 aa5.42□□□□□ -1.54
VPS8-219ENST00000469479 RSPH3Q86UC2 560 aa5.42□□□□□ -1.54
VPS8-219ENST00000469479 CDYL2Q8N8U2 506 aa5.42□□□□□ -1.54
VPS8-219ENST00000469479 TDRD5Q8NAT2 981 aaKnown RBP5.42□□□□□ -1.54
VPS8-219ENST00000469479 ZSWIM2Q8NEG5 633 aa5.42□□□□□ -1.54
VPS8-219ENST00000469479 SPPL3Q8TCT6 385 aa5.42□□□□□ -1.54
VPS8-219ENST00000469479 ATP6V0A1Q93050 837 aa5.42□□□□□ -1.54
VPS8-219ENST00000469479 EAF2Q96CJ1 260 aaPredicted RBP5.42□□□□□ -1.54
VPS8-219ENST00000469479 ZNF689Q96CS4 500 aaPredicted RBP5.42□□□□□ -1.54
VPS8-219ENST00000469479 CEP95Q96GE4 821 aa5.42□□□□□ -1.54
VPS8-219ENST00000469479 ELF4Q99607 663 aaPredicted RBP5.42□□□□□ -1.54
VPS8-219ENST00000469479 FTHL17Q9BXU8 183 aa5.42□□□□□ -1.54
VPS8-219ENST00000469479 NOB1Q9ULX3 412 aaKnown RBP5.42□□□□□ -1.54
VPS8-219ENST00000469479 LZTS1Q9Y250 596 aa5.42□□□□□ -1.54
VPS8-219ENST00000469479 PCDHB6Q9Y5E3 794 aa5.42□□□□□ -1.54
VPS8-219ENST00000469479 ZFYVE26Q68DK2 2539 aa5.42□□□□□ -1.54
VPS8-219ENST00000469479 SPTBN2O15020 2390 aa5.42□□□□□ -1.54
VPS8-219ENST00000469479 GCN1Q92616 2671 aaKnown RBP5.41□□□□□ -1.54
VPS8-219ENST00000469479 ZZEF1O43149 2961 aa5.41□□□□□ -1.54
VPS8-219ENST00000469479 GREB1LQ9C091 1923 aaPredicted RBP5.41□□□□□ -1.54
VPS8-219ENST00000469479 CYP2D7A0A087X1C5 515 aa5.41□□□□□ -1.54
VPS8-219ENST00000469479 TBKBP1A7MCY6 615 aa5.41□□□□□ -1.54
VPS8-219ENST00000469479 GOLIM4O00461 696 aa5.41□□□□□ -1.54
VPS8-219ENST00000469479 PRKAB2O43741 272 aa5.41□□□□□ -1.54
VPS8-219ENST00000469479 NRP2O60462 931 aa5.41□□□□□ -1.54
VPS8-219ENST00000469479 CLEC2LP0C7M8 214 aa5.41□□□□□ -1.54
VPS8-219ENST00000469479 TSPY3P0CV98 308 aa5.41□□□□□ -1.54
VPS8-219ENST00000469479 TSPY8P0CW00 308 aa5.41□□□□□ -1.54
VPS8-219ENST00000469479 XPAP23025 273 aaPredicted RBP5.41□□□□□ -1.54
VPS8-219ENST00000469479 CALML3P27482 149 aa5.41□□□□□ -1.54
VPS8-219ENST00000469479 HOXC8P31273 242 aa5.41□□□□□ -1.54
VPS8-219ENST00000469479 ADD2P35612 726 aa5.41□□□□□ -1.54
VPS8-219ENST00000469479 CAMK1Q14012 370 aa5.41□□□□□ -1.54
VPS8-219ENST00000469479 BMS1Q14692 1282 aaKnown RBP5.41□□□□□ -1.54
VPS8-219ENST00000469479 FAM102AQ5T9C2 384 aaPredicted RBP5.41□□□□□ -1.54
VPS8-219ENST00000469479 ESRP1Q6NXG1 681 aaKnown RBP5.41□□□□□ -1.54
VPS8-219ENST00000469479 TAF2Q6P1X5 1199 aa5.41□□□□□ -1.54
VPS8-219ENST00000469479 RASGRP2Q7LDG7 609 aa5.41□□□□□ -1.54
VPS8-219ENST00000469479 AACSQ86V21 672 aa5.41□□□□□ -1.54
VPS8-219ENST00000469479 NSUN6Q8TEA1 469 aaKnown RBP5.41□□□□□ -1.54
VPS8-219ENST00000469479 POF1BQ8WVV4 589 aa5.41□□□□□ -1.54
VPS8-219ENST00000469479 CASP10Q92851 521 aa5.41□□□□□ -1.54
VPS8-219ENST00000469479 S1PR5Q9H228 398 aa5.41□□□□□ -1.54
VPS8-219ENST00000469479 RANBP17Q9H2T7 1088 aaKnown RBP5.41□□□□□ -1.54
VPS8-219ENST00000469479 SPO11Q9Y5K1 396 aa5.41□□□□□ -1.54
VPS8-219ENST00000469479 WDR19Q8NEZ3 1342 aa5.41□□□□□ -1.54
VPS8-219ENST00000469479 SALL3Q9BXA9 1300 aa5.41□□□□□ -1.54
VPS8-219ENST00000469479 EIF3JO75822 258 aaKnown RBP5.4□□□□□ -1.54
VPS8-219ENST00000469479 C1QL1O75973 258 aa5.4□□□□□ -1.54
VPS8-219ENST00000469479 PCDH8O95206 1070 aa5.4□□□□□ -1.54
VPS8-219ENST00000469479 ARIH2O95376 493 aa5.4□□□□□ -1.54
VPS8-219ENST00000469479 CFIP05156 583 aa5.4□□□□□ -1.54
VPS8-219ENST00000469479 TGFB3P10600 412 aa5.4□□□□□ -1.54
VPS8-219ENST00000469479 SLC9A1P19634 815 aa5.4□□□□□ -1.54
VPS8-219ENST00000469479 MCCP23508 829 aa5.4□□□□□ -1.54
VPS8-219ENST00000469479 PPM1AP35813 382 aa5.4□□□□□ -1.54
VPS8-219ENST00000469479 IGFALSP35858 605 aa5.4□□□□□ -1.54
VPS8-219ENST00000469479 TECP42680 631 aa5.4□□□□□ -1.54
VPS8-219ENST00000469479 RARSP54136 660 aaKnown RBP5.4□□□□□ -1.54
VPS8-219ENST00000469479 RPS6P62753 249 aaKnown RBP5.4□□□□□ -1.54
VPS8-219ENST00000469479 ATP8B2P98198 1209 aa5.4□□□□□ -1.54
VPS8-219ENST00000469479 TDGQ13569 410 aa5.4□□□□□ -1.54
VPS8-219ENST00000469479 LY6KQ17RY6 165 aa5.4□□□□□ -1.54
VPS8-219ENST00000469479 ZNF528Q3MIS6 628 aa5.4□□□□□ -1.54
VPS8-219ENST00000469479 SPDYE7PQ495Y7 208 aa5.4□□□□□ -1.54
VPS8-219ENST00000469479 CCDC178Q5BJE1 867 aa5.4□□□□□ -1.54
VPS8-219ENST00000469479 SLC30A10Q6XR72 485 aa5.4□□□□□ -1.54
VPS8-219ENST00000469479 CHST3Q7LGC8 479 aa5.4□□□□□ -1.54
VPS8-219ENST00000469479 ADGRD2Q7Z7M1 963 aa5.4□□□□□ -1.54
VPS8-219ENST00000469479 RBM23Q86U06 439 aaKnown RBP5.4□□□□□ -1.54
VPS8-219ENST00000469479 CLASRPQ8N2M8 674 aaKnown RBP5.4□□□□□ -1.54
VPS8-219ENST00000469479 DNAJC2Q99543 621 aaKnown RBP5.4□□□□□ -1.54
VPS8-219ENST00000469479 NACAP1Q9BZK3 213 aa5.4□□□□□ -1.54
VPS8-219ENST00000469479 PAG1Q9NWQ8 432 aa5.4□□□□□ -1.54
VPS8-219ENST00000469479 WNT16Q9UBV4 365 aa5.4□□□□□ -1.54
VPS8-219ENST00000469479 B4GALT6Q9UBX8 382 aa5.4□□□□□ -1.54
VPS8-219ENST00000469479 ANGPTL2Q9UKU9 493 aa5.4□□□□□ -1.54
VPS8-219ENST00000469479 STX8Q9UNK0 236 aa5.4□□□□□ -1.54
VPS8-219ENST00000469479 SQORQ9Y6N5 450 aa5.4□□□□□ -1.54
VPS8-219ENST00000469479 DDX49Q9Y6V7 483 aaKnown RBP5.4□□□□□ -1.54
VPS8-219ENST00000469479 CCDC171Q6TFL3 1326 aa5.4□□□□□ -1.55
VPS8-219ENST00000469479 NLRC5Q86WI3 1866 aa5.39□□□□□ -1.55
VPS8-219ENST00000469479 MYO7AQ13402 2215 aa5.39□□□□□ -1.55
VPS8-219ENST00000469479 LRRC3CA6NJW4 275 aa5.39□□□□□ -1.55
VPS8-219ENST00000469479 C2CD4DB7Z1M9 353 aa5.39□□□□□ -1.55
VPS8-219ENST00000469479 LRP3O75074 770 aa5.39□□□□□ -1.55
VPS8-219ENST00000469479 SEC24DO94855 1032 aaPredicted RBP5.39□□□□□ -1.55
VPS8-219ENST00000469479 IFIT2P09913 472 aaKnown RBP5.39□□□□□ -1.55
VPS8-219ENST00000469479 ZNF286BP0CG31 522 aa5.39□□□□□ -1.55
VPS8-219ENST00000469479 DNAJB1P25685 340 aa5.39□□□□□ -1.55
VPS8-219ENST00000469479 MAGEA9P43362 315 aa5.39□□□□□ -1.55
VPS8-219ENST00000469479 TDO2P48775 406 aa5.39□□□□□ -1.55
VPS8-219ENST00000469479 GPR15P49685 360 aa5.39□□□□□ -1.55
VPS8-219ENST00000469479 SRSF4Q08170 494 aaKnown RBP5.39□□□□□ -1.55
VPS8-219ENST00000469479 SLFN5Q08AF3 891 aa5.39□□□□□ -1.55
VPS8-219ENST00000469479 KCNC3Q14003 757 aa5.39□□□□□ -1.55
VPS8-219ENST00000469479 CCDC96Q2M329 555 aa5.39□□□□□ -1.55
VPS8-219ENST00000469479 SYDE2Q5VT97 1194 aa5.39□□□□□ -1.55
VPS8-219ENST00000469479 XRRA1Q6P2D8 792 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms