RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 MYLK4Q86YV6 388 aaPredicted RBP12.49□□□□□ -0.41
VARS2-205ENST00000469358 SPNS2Q8IVW8 549 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 TNS4Q8IZW8 715 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 HPDLQ96IR7 371 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 CLMNQ96JQ2 1002 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 LGMNQ99538 433 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 SH3GL3Q99963 347 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 ECSITQ9BQ95 431 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 MMADHCQ9H3L0 296 aaPredicted RBP12.49□□□□□ -0.41
VARS2-205ENST00000469358 RNPEPQ9H4A4 650 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 PPP1R1BQ9UD71 204 aaPredicted RBP12.49□□□□□ -0.41
VARS2-205ENST00000469358 KCNG1Q9UIX4 513 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 SYNJ2BP-COX16A0A087WUM0 186 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 TPP1O14773 563 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 PPEF2O14830 753 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 KLF11O14901 512 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 MAGEC1O60732 1142 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 ALDOAP04075 364 aaKnown RBP12.49□□□□□ -0.41
VARS2-205ENST00000469358 RXRBP28702 533 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 TNFAIP1Q13829 316 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 GOLGA7BQ2TAP0 167 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 EML3Q32P44 896 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 SFT2D3Q587I9 215 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 CWF19L1Q69YN2 538 aaKnown RBP12.49□□□□□ -0.41
VARS2-205ENST00000469358 TP53INP2Q8IXH6 220 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 PHTF2Q8N3S3 785 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 SEPT1Q8WYJ6 367 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 AZIN2Q96A70 460 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 FRMD8P1Q9BZ68 369 aaPredicted RBP12.49□□□□□ -0.41
VARS2-205ENST00000469358 COX16Q9P0S2 106 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 PPME1Q9Y570 386 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 MAGEA13PA6NCF6 341 aa12.48□□□□□ -0.41
VARS2-205ENST00000469358 SDR42E2A6NKP2 422 aa12.48□□□□□ -0.41
VARS2-205ENST00000469358 B4GALT4O60513 344 aa12.48□□□□□ -0.41
VARS2-205ENST00000469358 SNNO75324 88 aaPredicted RBP12.48□□□□□ -0.41
VARS2-205ENST00000469358 KRT38O76015 456 aa12.48□□□□□ -0.41
VARS2-205ENST00000469358 NCF2P19878 526 aaPredicted RBP12.48□□□□□ -0.41
VARS2-205ENST00000469358 CYP2F1P24903 491 aa12.48□□□□□ -0.41
VARS2-205ENST00000469358 ABCD1P33897 745 aa12.48□□□□□ -0.41
VARS2-205ENST00000469358 ATXN3P54252 364 aaPredicted RBP12.48□□□□□ -0.41
VARS2-205ENST00000469358 USP4Q13107 963 aa12.48□□□□□ -0.41
VARS2-205ENST00000469358 TUBB3Q13509 450 aa12.48□□□□□ -0.41
VARS2-205ENST00000469358 C11orf91Q3C1V1 193 aa12.48□□□□□ -0.41
VARS2-205ENST00000469358 PPP1R26Q5T8A7 1209 aaPredicted RBP12.48□□□□□ -0.41
VARS2-205ENST00000469358 EFCAB12Q6NXP0 572 aa12.48□□□□□ -0.41
VARS2-205ENST00000469358 KCNT2Q6UVM3 1135 aa12.48□□□□□ -0.41
VARS2-205ENST00000469358 CMC1Q7Z7K0 106 aa12.48□□□□□ -0.41
VARS2-205ENST00000469358 HPS6Q86YV9 775 aa12.48□□□□□ -0.41
VARS2-205ENST00000469358 C10orf107Q8IVU9 208 aa12.48□□□□□ -0.41
VARS2-205ENST00000469358 ADAMTS6Q9UKP5 1117 aa12.48□□□□□ -0.41
VARS2-205ENST00000469358 RAB27AP51159 221 aa12.48□□□□□ -0.41
VARS2-205ENST00000469358 HDAC4P56524 1084 aa12.48□□□□□ -0.41
VARS2-205ENST00000469358 DSG1Q02413 1049 aa12.48□□□□□ -0.41
VARS2-205ENST00000469358 TEDDM1Q5T9Z0 273 aa12.48□□□□□ -0.41
VARS2-205ENST00000469358 IER5Q5VY09 327 aa12.48□□□□□ -0.41
VARS2-205ENST00000469358 AP1ARQ63HQ0 302 aa12.48□□□□□ -0.41
VARS2-205ENST00000469358 TSHZ1Q6ZSZ6 1077 aa12.48□□□□□ -0.41
VARS2-205ENST00000469358 ARHGAP24Q8N264 748 aa12.48□□□□□ -0.41
VARS2-205ENST00000469358 KHSRPQ92945 711 aaKnown RBP eCLIP12.48□□□□□ -0.41
VARS2-205ENST00000469358 GBP5Q96PP8 586 aa12.48□□□□□ -0.41
VARS2-205ENST00000469358 EBNA1BP2Q99848 306 aaKnown RBP12.48□□□□□ -0.41
VARS2-205ENST00000469358 ANGPTL2Q9UKU9 493 aa12.48□□□□□ -0.41
VARS2-205ENST00000469358 A8MXQ7 604 aa12.47□□□□□ -0.41
VARS2-205ENST00000469358 NOP56O00567 594 aaKnown RBP12.47□□□□□ -0.41
VARS2-205ENST00000469358 ACKR2O00590 384 aa12.47□□□□□ -0.41
VARS2-205ENST00000469358 PROZP22891 400 aa12.47□□□□□ -0.41
VARS2-205ENST00000469358 PEX2P28328 305 aa12.47□□□□□ -0.41
VARS2-205ENST00000469358 PDE1CQ14123 709 aaPredicted RBP12.47□□□□□ -0.41
VARS2-205ENST00000469358 NET1Q7Z628 596 aaPredicted RBP12.47□□□□□ -0.41
VARS2-205ENST00000469358 TTC30AQ86WT1 665 aa12.47□□□□□ -0.41
VARS2-205ENST00000469358 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.47□□□□□ -0.41
VARS2-205ENST00000469358 C7orf31Q8N865 590 aa12.47□□□□□ -0.41
VARS2-205ENST00000469358 GSDMBQ8TAX9 411 aa12.47□□□□□ -0.41
VARS2-205ENST00000469358 CXorf38Q8TB03 319 aa12.47□□□□□ -0.41
VARS2-205ENST00000469358 PNPLA8Q9NP80 782 aa12.47□□□□□ -0.41
VARS2-205ENST00000469358 NME7Q9Y5B8 376 aa12.47□□□□□ -0.41
VARS2-205ENST00000469358 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.47□□□□□ -0.41
VARS2-205ENST00000469358 BUD23O43709 281 aaKnown RBP12.47□□□□□ -0.41
VARS2-205ENST00000469358 USP12O75317 370 aa12.47□□□□□ -0.41
VARS2-205ENST00000469358 SNUPNO95149 360 aaKnown RBP12.47□□□□□ -0.41
VARS2-205ENST00000469358 ERVK-10P10266 1014 aa12.47□□□□□ -0.41
VARS2-205ENST00000469358 FGF3P11487 239 aaPredicted RBP12.47□□□□□ -0.41
VARS2-205ENST00000469358 MLH1P40692 756 aa12.47□□□□□ -0.41
VARS2-205ENST00000469358 CCNFP41002 786 aa12.47□□□□□ -0.41
VARS2-205ENST00000469358 SLC1A6P48664 564 aa12.47□□□□□ -0.41
VARS2-205ENST00000469358 AP2B1P63010 937 aa12.47□□□□□ -0.41
VARS2-205ENST00000469358 MBTD1Q05BQ5 628 aa12.47□□□□□ -0.41
VARS2-205ENST00000469358 Q3C1V9 767 aa12.47□□□□□ -0.41
VARS2-205ENST00000469358 FAM47CQ5HY64 1035 aa12.47□□□□□ -0.41
VARS2-205ENST00000469358 LGSNQ5TDP6 509 aa12.47□□□□□ -0.41
VARS2-205ENST00000469358 FAM160B1Q5W0V3 765 aa12.47□□□□□ -0.41
VARS2-205ENST00000469358 MBLAC2Q68D91 279 aa12.47□□□□□ -0.41
VARS2-205ENST00000469358 FBXO16Q8IX29 292 aaPredicted RBP12.47□□□□□ -0.41
VARS2-205ENST00000469358 TRIM4Q9C037 500 aa12.47□□□□□ -0.41
VARS2-205ENST00000469358 NRDE2Q9H7Z3 1164 aa12.47□□□□□ -0.41
VARS2-205ENST00000469358 SEPT10Q9P0V9 454 aa12.47□□□□□ -0.41
VARS2-205ENST00000469358 A0A087WZ62 844 aa12.47□□□□□ -0.41
VARS2-205ENST00000469358 CCDC78A2IDD5 438 aa12.47□□□□□ -0.41
VARS2-205ENST00000469358 FAM159BA6NKW6 160 aa12.47□□□□□ -0.41
VARS2-205ENST00000469358 SIN3BO75182 1162 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms