RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 GIMAP4Q9NUV9 329 aa10.26□□□□□ -0.77
NUP50-214ENST00000469163 RABGEF1Q9UJ41 708 aa10.26□□□□□ -0.77
NUP50-214ENST00000469163 AK5Q9Y6K8 562 aa10.26□□□□□ -0.77
NUP50-214ENST00000469163 PRUNE2Q8WUY3 3088 aa10.26□□□□□ -0.77
NUP50-214ENST00000469163 AQP9O43315 295 aa10.26□□□□□ -0.77
NUP50-214ENST00000469163 KATNA1O75449 491 aa10.26□□□□□ -0.77
NUP50-214ENST00000469163 USP1O94782 785 aa10.26□□□□□ -0.77
NUP50-214ENST00000469163 FECHP22830 423 aa10.26□□□□□ -0.77
NUP50-214ENST00000469163 STX2P32856 288 aa10.26□□□□□ -0.77
NUP50-214ENST00000469163 KRT20P35900 424 aa10.26□□□□□ -0.77
NUP50-214ENST00000469163 SLC5A3P53794 718 aa10.26□□□□□ -0.77
NUP50-214ENST00000469163 EIF3BP55884 814 aaKnown RBP10.26□□□□□ -0.77
NUP50-214ENST00000469163 C21orf59P57076 290 aa10.26□□□□□ -0.77
NUP50-214ENST00000469163 SP3Q02447 781 aa10.26□□□□□ -0.77
NUP50-214ENST00000469163 STILQ15468 1287 aa10.26□□□□□ -0.77
NUP50-214ENST00000469163 APTXQ7Z2E3 356 aaKnown RBP10.26□□□□□ -0.77
NUP50-214ENST00000469163 DEFB128Q7Z7B8 93 aa10.26□□□□□ -0.77
NUP50-214ENST00000469163 RALGPS2Q86X27 583 aaPredicted RBP10.26□□□□□ -0.77
NUP50-214ENST00000469163 ELMOD1Q8N336 334 aa10.26□□□□□ -0.77
NUP50-214ENST00000469163 LZTR1Q8N653 840 aa10.26□□□□□ -0.77
NUP50-214ENST00000469163 SNF8Q96H20 258 aa10.26□□□□□ -0.77
NUP50-214ENST00000469163 PRICKLE1Q96MT3 831 aaPredicted RBP10.26□□□□□ -0.77
NUP50-214ENST00000469163 PITPNM3Q9BZ71 974 aa10.26□□□□□ -0.77
NUP50-214ENST00000469163 DDX43Q9NXZ2 648 aaKnown RBP10.26□□□□□ -0.77
NUP50-214ENST00000469163 DNAJC12Q9UKB3 198 aa10.26□□□□□ -0.77
NUP50-214ENST00000469163 TBX20Q9UMR3 447 aa10.26□□□□□ -0.77
NUP50-214ENST00000469163 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.26□□□□□ -0.77
NUP50-214ENST00000469163 LRRC37AA6NMS7 1700 aa10.26□□□□□ -0.77
NUP50-214ENST00000469163 KIAA1551Q9HCM1 1747 aa10.26□□□□□ -0.77
NUP50-214ENST00000469163 MANSC4A6NHS7 340 aaPredicted RBP10.25□□□□□ -0.77
NUP50-214ENST00000469163 LGALS16A8MUM7 142 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 H3BSA7 217 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 MAPK13O15264 365 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 EIF2S1P05198 315 aaKnown RBP10.25□□□□□ -0.77
NUP50-214ENST00000469163 GFAPP14136 432 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 PTPN2P17706 415 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 EVI2BP34910 448 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 VAMP7P51809 220 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 LAMTOR4Q0VGL1 99 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 SREBF2Q12772 1141 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 ASPHQ12797 758 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 CBWD6Q4V339 395 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 CBWD3Q5JTY5 395 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 CBWD5Q5RIA9 395 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 DENND2CQ68D51 928 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 ITPRIPL1Q6GPH6 555 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 ARHGEF18Q6ZSZ5 1173 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 KIAA0319LQ8IZA0 1049 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 HCAR2Q8TDS4 363 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 EFHD2Q96C19 240 aaPredicted RBP10.25□□□□□ -0.77
NUP50-214ENST00000469163 CCDC138Q96M89 665 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 AIFM2Q9BRQ8 373 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 DCUN1D5Q9BTE7 237 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 OSBPL6Q9BZF3 934 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 RNF208Q9H0X6 261 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 SMARCAD1Q9H4L7 1026 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 MAN1C1Q9NR34 630 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 TBC1D30Q9Y2I9 924 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 TIMM13Q9Y5L4 95 aaPredicted RBP10.25□□□□□ -0.77
NUP50-214ENST00000469163 KNL1Q8NG31 2342 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 CYP3A7-CYP3A51PA0A087WV96 503 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 SPATA31C2B4DYI2 1134 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 M0QZ92 97 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 DDX3XO00571 662 aaKnown RBP eCLIP10.25□□□□□ -0.77
NUP50-214ENST00000469163 GYG2O15488 501 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 TREHO43280 583 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 GAP43P17677 238 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 TNFAIP3P21580 790 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 PTPN4P29074 926 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 CHN2P52757 468 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 BCAR1P56945 870 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 CNGA2Q16280 664 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 CYP2A13Q16696 494 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 DGKDQ16760 1214 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 CELF3Q5SZQ8 465 aaKnown RBP10.25□□□□□ -0.77
NUP50-214ENST00000469163 SPOUT1Q5T280 376 aaKnown RBP10.25□□□□□ -0.77
NUP50-214ENST00000469163 MFSD14CQ5VZR4 134 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 NIPAL1Q6NVV3 410 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 ZNF572Q7Z3I7 529 aaPredicted RBP10.25□□□□□ -0.77
NUP50-214ENST00000469163 DAW1Q8N136 415 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 MCPH1Q8NEM0 835 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 CDC26Q8NHZ8 85 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 SLC7A6OSQ96CW6 309 aaPredicted RBP10.25□□□□□ -0.77
NUP50-214ENST00000469163 ADAM7Q9H2U9 754 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 DCAF16Q9NXF7 216 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 A0A088AWK7 358 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 GOLGA8SH3BPF8 625 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 CYP26A1O43174 497 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 CNMDO75829 334 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 CXCL8P10145 99 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 CYP3A7P24462 503 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 EEF1GP26641 437 aaKnown RBP10.25□□□□□ -0.77
NUP50-214ENST00000469163 RAP1GAPP47736 663 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 FCGRTP55899 365 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 B2MP61769 119 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 PDK3Q15120 406 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 TRIM16LQ309B1 348 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 TMEM270Q6UE05 265 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 REPS2Q8NFH8 660 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 NOX5Q96PH1 765 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms