RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 COCHO43405 550 aa13.32□□□□□ -0.28
RUNX1-213ENST00000469087 GTF2F1P35269 517 aaKnown RBP eCLIP13.32□□□□□ -0.285e-6■■■■□ 24.4
RUNX1-213ENST00000469087 PPP3CCP48454 512 aa13.32□□□□□ -0.28
RUNX1-213ENST00000469087 NRIP1P48552 1158 aa13.32□□□□□ -0.28
RUNX1-213ENST00000469087 C2orf54Q08AI8 447 aa13.32□□□□□ -0.28
RUNX1-213ENST00000469087 KLF1Q13351 362 aaPredicted RBP13.32□□□□□ -0.28
RUNX1-213ENST00000469087 DPYSL3Q14195 570 aa13.32□□□□□ -0.28
RUNX1-213ENST00000469087 PDK2Q15119 407 aa13.32□□□□□ -0.28
RUNX1-213ENST00000469087 SIX1Q15475 284 aaPredicted RBP13.32□□□□□ -0.28
RUNX1-213ENST00000469087 DPYSL2Q16555 572 aa13.32□□□□□ -0.28
RUNX1-213ENST00000469087 DUSP6Q16828 381 aa13.32□□□□□ -0.28
RUNX1-213ENST00000469087 PPP6R3Q5H9R7 873 aaPredicted RBP13.32□□□□□ -0.28
RUNX1-213ENST00000469087 HECTD3Q5T447 861 aa13.32□□□□□ -0.28
RUNX1-213ENST00000469087 TMC8Q8IU68 726 aa13.32□□□□□ -0.28
RUNX1-213ENST00000469087 PSTKQ8IV42 348 aaKnown RBP13.32□□□□□ -0.28
RUNX1-213ENST00000469087 MAP7D3Q8IWC1 876 aa13.32□□□□□ -0.28
RUNX1-213ENST00000469087 RNF34Q969K3 372 aa13.32□□□□□ -0.28
RUNX1-213ENST00000469087 SLC39A13Q96H72 371 aa13.32□□□□□ -0.28
RUNX1-213ENST00000469087 KCTD15Q96SI1 283 aaPredicted RBP13.32□□□□□ -0.28
RUNX1-213ENST00000469087 NAP1L3Q99457 506 aaPredicted RBP13.32□□□□□ -0.28
RUNX1-213ENST00000469087 CORO1BQ9BR76 489 aa13.32□□□□□ -0.28
RUNX1-213ENST00000469087 CALN1Q9BXU9 219 aa13.32□□□□□ -0.28
RUNX1-213ENST00000469087 RBM12Q9NTZ6 932 aaKnown RBP13.32□□□□□ -0.28
RUNX1-213ENST00000469087 HCFC1R1Q9NWW0 138 aa13.32□□□□□ -0.28
RUNX1-213ENST00000469087 ARHGEF38Q9NXL2 777 aa13.32□□□□□ -0.28
RUNX1-213ENST00000469087 TLR6Q9Y2C9 796 aa13.32□□□□□ -0.28
RUNX1-213ENST00000469087 KCNU1A8MYU2 1149 aa13.32□□□□□ -0.28
RUNX1-213ENST00000469087 GABRR2P28476 465 aa13.32□□□□□ -0.28
RUNX1-213ENST00000469087 CCR1P32246 355 aa13.32□□□□□ -0.28
RUNX1-213ENST00000469087 PTPN7P35236 360 aa13.32□□□□□ -0.28
RUNX1-213ENST00000469087 ATP5C1P36542 298 aaKnown RBP13.32□□□□□ -0.28
RUNX1-213ENST00000469087 CETN2P41208 172 aa13.32□□□□□ -0.28
RUNX1-213ENST00000469087 AIF1P55008 147 aa13.32□□□□□ -0.28
RUNX1-213ENST00000469087 ITIH3Q06033 890 aa13.32□□□□□ -0.28
RUNX1-213ENST00000469087 SCAPQ12770 1279 aa13.32□□□□□ -0.28
RUNX1-213ENST00000469087 KRT81Q14533 505 aa13.32□□□□□ -0.28
RUNX1-213ENST00000469087 PPP2R5EQ16537 467 aa13.32□□□□□ -0.28
RUNX1-213ENST00000469087 PABPC1LQ4VXU2 614 aaKnown RBP13.32□□□□□ -0.28
RUNX1-213ENST00000469087 ZNF697Q5TEC3 545 aa13.32□□□□□ -0.28
RUNX1-213ENST00000469087 NOA1Q8NC60 698 aaKnown RBP13.32□□□□□ -0.28
RUNX1-213ENST00000469087 HDAC7Q8WUI4 952 aa13.32□□□□□ -0.28
RUNX1-213ENST00000469087 TSC1Q92574 1164 aa13.32□□□□□ -0.28
RUNX1-213ENST00000469087 CYP2S1Q96SQ9 504 aa13.32□□□□□ -0.28
RUNX1-213ENST00000469087 ZNF576Q9H609 170 aa13.32□□□□□ -0.28
RUNX1-213ENST00000469087 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.32□□□□□ -0.28
RUNX1-213ENST00000469087 DNMT3BQ9UBC3 853 aaKnown RBP13.32□□□□□ -0.28
RUNX1-213ENST00000469087 RASAL2Q9UJF2 1139 aa13.32□□□□□ -0.28
RUNX1-213ENST00000469087 EFR3BQ9Y2G0 817 aa13.32□□□□□ -0.28
RUNX1-213ENST00000469087 SLC12A8A0AV02 714 aa13.31□□□□□ -0.28
RUNX1-213ENST00000469087 FAM72CH0Y354 149 aa13.31□□□□□ -0.28
RUNX1-213ENST00000469087 OAS1P00973 400 aaKnown RBP13.31□□□□□ -0.28
RUNX1-213ENST00000469087 HOXA9P31269 272 aa13.31□□□□□ -0.28
RUNX1-213ENST00000469087 TBX4P57082 545 aa13.31□□□□□ -0.28
RUNX1-213ENST00000469087 KCNC3Q14003 757 aa13.31□□□□□ -0.28
RUNX1-213ENST00000469087 PPP2R5DQ14738 602 aa13.31□□□□□ -0.28
RUNX1-213ENST00000469087 TRIP4Q15650 581 aaPredicted RBP13.31□□□□□ -0.28
RUNX1-213ENST00000469087 CLUL1Q15846 466 aa13.31□□□□□ -0.28
RUNX1-213ENST00000469087 ARL13BQ3SXY8 428 aa13.31□□□□□ -0.28
RUNX1-213ENST00000469087 ANKRD20A8PQ5CZ79 823 aa13.31□□□□□ -0.28
RUNX1-213ENST00000469087 EFHC2Q5JST6 749 aa13.31□□□□□ -0.28
RUNX1-213ENST00000469087 BRMS1LQ5PSV4 323 aa13.31□□□□□ -0.28
RUNX1-213ENST00000469087 FAM72AQ5TYM5 149 aa13.31□□□□□ -0.28
RUNX1-213ENST00000469087 TXNDC8Q6A555 127 aa13.31□□□□□ -0.28
RUNX1-213ENST00000469087 FAM72DQ6L9T8 149 aa13.31□□□□□ -0.28
RUNX1-213ENST00000469087 KLHDC10Q6PID8 442 aa13.31□□□□□ -0.28
RUNX1-213ENST00000469087 FAM72BQ86X60 149 aa13.31□□□□□ -0.28
RUNX1-213ENST00000469087 ELMOD1Q8N336 334 aa13.31□□□□□ -0.28
RUNX1-213ENST00000469087 PRELID2Q8N945 189 aa13.31□□□□□ -0.28
RUNX1-213ENST00000469087 MYRIPQ8NFW9 859 aa13.31□□□□□ -0.28
RUNX1-213ENST00000469087 MRPL38Q96DV4 380 aaKnown RBP13.31□□□□□ -0.28
RUNX1-213ENST00000469087 RPGRIP1Q96KN7 1286 aa13.31□□□□□ -0.28
RUNX1-213ENST00000469087 FCRL2Q96LA5 508 aaPredicted RBP13.31□□□□□ -0.28
RUNX1-213ENST00000469087 SLC22A12Q96S37 553 aa13.31□□□□□ -0.28
RUNX1-213ENST00000469087 CDK5RAP1Q96SZ6 601 aaKnown RBP13.31□□□□□ -0.28
RUNX1-213ENST00000469087 CWC15Q9P013 229 aaKnown RBP13.31□□□□□ -0.28
RUNX1-213ENST00000469087 XPO7Q9UIA9 1087 aaKnown RBP13.31□□□□□ -0.28
RUNX1-213ENST00000469087 DNMT3LQ9UJW3 386 aa13.31□□□□□ -0.28
RUNX1-213ENST00000469087 DENND4CQ5VZ89 1909 aa13.31□□□□□ -0.28
RUNX1-213ENST00000469087 OBSL1O75147 1896 aa13.31□□□□□ -0.28
RUNX1-213ENST00000469087 CCDC195A0A1B0GUA6 201 aa13.3□□□□□ -0.28
RUNX1-213ENST00000469087 EFCAB8A8MWE9 144 aa13.3□□□□□ -0.28
RUNX1-213ENST00000469087 TJP3O95049 919 aa13.3□□□□□ -0.28
RUNX1-213ENST00000469087 IGLV3-27P01718 113 aa13.3□□□□□ -0.28
RUNX1-213ENST00000469087 HMBSP08397 361 aa13.3□□□□□ -0.28
RUNX1-213ENST00000469087 HNRNPA1P09651 372 aaKnown RBP eCLIP13.3□□□□□ -0.28
RUNX1-213ENST00000469087 MYL4P12829 197 aa13.3□□□□□ -0.28
RUNX1-213ENST00000469087 GJA1P17302 382 aa13.3□□□□□ -0.28
RUNX1-213ENST00000469087 PTPN2P17706 415 aa13.3□□□□□ -0.28
RUNX1-213ENST00000469087 CCR2P41597 374 aa13.3□□□□□ -0.28
RUNX1-213ENST00000469087 TUBP50607 506 aa13.3□□□□□ -0.28
RUNX1-213ENST00000469087 NNTQ13423 1086 aa13.3□□□□□ -0.28
RUNX1-213ENST00000469087 NAA30Q147X3 362 aaPredicted RBP13.3□□□□□ -0.28
RUNX1-213ENST00000469087 VN1R2Q8NFZ6 395 aa13.3□□□□□ -0.28
RUNX1-213ENST00000469087 PCDH19Q8TAB3 1148 aa13.3□□□□□ -0.28
RUNX1-213ENST00000469087 RNF157Q96PX1 679 aa13.3□□□□□ -0.28
RUNX1-213ENST00000469087 SIK2Q9H0K1 926 aa13.3□□□□□ -0.28
RUNX1-213ENST00000469087 GKN1Q9NS71 199 aa13.3□□□□□ -0.28
RUNX1-213ENST00000469087 OR12D3Q9UGF7 316 aa13.3□□□□□ -0.28
RUNX1-213ENST00000469087 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.3□□□□□ -0.28
RUNX1-213ENST00000469087 DPP7Q9UHL4 492 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms