RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 GOLGA1Q92805 767 aa17.85■□□□□ 0.45
SSBP1-207ENST00000468267 LOXL4Q96JB6 756 aa17.85■□□□□ 0.45
SSBP1-207ENST00000468267 ZC3H10Q96K80 434 aaKnown RBP17.85■□□□□ 0.45
SSBP1-207ENST00000468267 SLC4A5Q9BY07 1137 aa17.85■□□□□ 0.45
SSBP1-207ENST00000468267 MIS12Q9H081 205 aa17.85■□□□□ 0.45
SSBP1-207ENST00000468267 ST7Q9NRC1 585 aa17.85■□□□□ 0.45
SSBP1-207ENST00000468267 SAMSN1Q9NSI8 373 aaKnown RBP17.85■□□□□ 0.45
SSBP1-207ENST00000468267 KCNJ18B7U540 433 aa17.84■□□□□ 0.45
SSBP1-207ENST00000468267 PRRT4C9JH25 899 aa17.84■□□□□ 0.45
SSBP1-207ENST00000468267 GOLGA6L22H0YM25 854 aa17.84■□□□□ 0.45
SSBP1-207ENST00000468267 ALDH1A2O94788 518 aa17.84■□□□□ 0.45
SSBP1-207ENST00000468267 CYBBP04839 570 aa17.84■□□□□ 0.45
SSBP1-207ENST00000468267 ID4P47928 161 aa17.84■□□□□ 0.45
SSBP1-207ENST00000468267 KCNJ12Q14500 433 aa17.84■□□□□ 0.45
SSBP1-207ENST00000468267 USP39Q53GS9 565 aaKnown RBP17.84■□□□□ 0.45
SSBP1-207ENST00000468267 DPY19L2P1Q6NXN4 242 aa17.84■□□□□ 0.45
SSBP1-207ENST00000468267 MDGA1Q8NFP4 955 aa17.84■□□□□ 0.45
SSBP1-207ENST00000468267 POLMQ9NP87 494 aaPredicted RBP17.84■□□□□ 0.45
SSBP1-207ENST00000468267 CYTH4Q9UIA0 394 aa17.84■□□□□ 0.45
SSBP1-207ENST00000468267 STOML2Q9UJZ1 356 aa17.84■□□□□ 0.45
SSBP1-207ENST00000468267 DNAJC12Q9UKB3 198 aa17.84■□□□□ 0.45
SSBP1-207ENST00000468267 AJAP1Q9UKB5 411 aaPredicted RBP17.84■□□□□ 0.45
SSBP1-207ENST00000468267 USP18Q9UMW8 372 aa17.84■□□□□ 0.45
SSBP1-207ENST00000468267 SLC27A6Q9Y2P4 619 aa17.84■□□□□ 0.45
SSBP1-207ENST00000468267 DCLK1O15075 740 aa17.83■□□□□ 0.44
SSBP1-207ENST00000468267 SART1O43290 800 aaKnown RBP17.83■□□□□ 0.44
SSBP1-207ENST00000468267 MSI1O43347 362 aaKnown RBP17.83■□□□□ 0.44
SSBP1-207ENST00000468267 LATS1O95835 1130 aa17.83■□□□□ 0.44
SSBP1-207ENST00000468267 FYNP06241 537 aa17.83■□□□□ 0.44
SSBP1-207ENST00000468267 EEF1GP26641 437 aaKnown RBP17.83■□□□□ 0.44
SSBP1-207ENST00000468267 NTSR1P30989 418 aa17.83■□□□□ 0.44
SSBP1-207ENST00000468267 PLK5Q496M5 336 aa17.83■□□□□ 0.44
SSBP1-207ENST00000468267 TCP11X2Q5H9J9 407 aa17.83■□□□□ 0.44
SSBP1-207ENST00000468267 ADGRF1Q5T601 910 aa17.83■□□□□ 0.44
SSBP1-207ENST00000468267 EGFLAMQ63HQ2 1017 aa17.83■□□□□ 0.44
SSBP1-207ENST00000468267 TMEM110Q86TL2 294 aa17.83■□□□□ 0.44
SSBP1-207ENST00000468267 ENOX1Q8TC92 643 aaKnown RBP17.83■□□□□ 0.44
SSBP1-207ENST00000468267 TPSD1Q9BZJ3 242 aa17.83■□□□□ 0.44
SSBP1-207ENST00000468267 DUSP15Q9H1R2 295 aaPredicted RBP17.83■□□□□ 0.44
SSBP1-207ENST00000468267 NFE2L3Q9Y4A8 694 aa17.83■□□□□ 0.44
SSBP1-207ENST00000468267 SPTBN2O15020 2390 aa17.83■□□□□ 0.44
SSBP1-207ENST00000468267 NUP205Q92621 2012 aa17.82■□□□□ 0.44
SSBP1-207ENST00000468267 FOXN3O00409 490 aaPredicted RBP17.82■□□□□ 0.44
SSBP1-207ENST00000468267 GFRA2O00451 464 aa17.82■□□□□ 0.44
SSBP1-207ENST00000468267 IGLV3-27P01718 113 aa17.82■□□□□ 0.44
SSBP1-207ENST00000468267 NCAM1P13591 858 aa17.82■□□□□ 0.44
SSBP1-207ENST00000468267 CLCN1P35523 988 aa17.82■□□□□ 0.44
SSBP1-207ENST00000468267 RING1Q06587 406 aa17.82■□□□□ 0.44
SSBP1-207ENST00000468267 KCNMA1Q12791 1236 aa17.82■□□□□ 0.44
SSBP1-207ENST00000468267 CSRP2Q16527 193 aa17.82■□□□□ 0.44
SSBP1-207ENST00000468267 MPPE1Q53F39 396 aa17.82■□□□□ 0.44
SSBP1-207ENST00000468267 BEND5Q7L4P6 421 aa17.82■□□□□ 0.44
SSBP1-207ENST00000468267 UNC45BQ8IWX7 931 aa17.82■□□□□ 0.44
SSBP1-207ENST00000468267 WDTC1Q8N5D0 677 aa17.82■□□□□ 0.44
SSBP1-207ENST00000468267 OLIG1Q8TAK6 271 aa17.82■□□□□ 0.44
SSBP1-207ENST00000468267 DDI1Q8WTU0 396 aa17.82■□□□□ 0.44
SSBP1-207ENST00000468267 RMDN1Q96DB5 314 aa17.82■□□□□ 0.44
SSBP1-207ENST00000468267 PIWIL1Q96J94 861 aaKnown RBP17.82■□□□□ 0.44
SSBP1-207ENST00000468267 SLC2A11Q9BYW1 496 aa17.82■□□□□ 0.44
SSBP1-207ENST00000468267 SEMA4GQ9NTN9 838 aa17.82■□□□□ 0.44
SSBP1-207ENST00000468267 PCDHGC3Q9UN70 934 aa17.82■□□□□ 0.44
SSBP1-207ENST00000468267 INVSQ9Y283 1065 aa17.82■□□□□ 0.44
SSBP1-207ENST00000468267 PLXND1Q9Y4D7 1925 aa17.82■□□□□ 0.44
SSBP1-207ENST00000468267 PRR5-ARHGAP8B1AHC4 643 aa17.81■□□□□ 0.44
SSBP1-207ENST00000468267 E5RJQ4 531 aa17.81■□□□□ 0.44
SSBP1-207ENST00000468267 PAPSS1O43252 624 aaPredicted RBP17.81■□□□□ 0.44
SSBP1-207ENST00000468267 RHOBTB1O94844 696 aa17.81■□□□□ 0.44
SSBP1-207ENST00000468267 EPN2O95208 641 aa17.81■□□□□ 0.44
SSBP1-207ENST00000468267 WASP42768 502 aa17.81■□□□□ 0.44
SSBP1-207ENST00000468267 TBX4P57082 545 aa17.81■□□□□ 0.44
SSBP1-207ENST00000468267 ZNF445P59923 1031 aa17.81■□□□□ 0.44
SSBP1-207ENST00000468267 ARHGAP8P85298 464 aa17.81■□□□□ 0.44
SSBP1-207ENST00000468267 LMNB2Q03252 620 aa17.81■□□□□ 0.44
SSBP1-207ENST00000468267 PTK2Q05397 1052 aa17.81■□□□□ 0.44
SSBP1-207ENST00000468267 PDCLQ13371 301 aa17.81■□□□□ 0.44
SSBP1-207ENST00000468267 NUGGCQ68CJ6 796 aa17.81■□□□□ 0.44
SSBP1-207ENST00000468267 SDE2Q6IQ49 451 aa17.81■□□□□ 0.44
SSBP1-207ENST00000468267 C11orf74Q86VG3 221 aa17.81■□□□□ 0.44
SSBP1-207ENST00000468267 FAM71AQ8IYT1 594 aa17.81■□□□□ 0.44
SSBP1-207ENST00000468267 CHPFQ8IZ52 775 aa17.81■□□□□ 0.44
SSBP1-207ENST00000468267 HMGB4Q8WW32 186 aa17.81■□□□□ 0.44
SSBP1-207ENST00000468267 AZIN2Q96A70 460 aa17.81■□□□□ 0.44
SSBP1-207ENST00000468267 FAM149B1Q96BN6 582 aa17.81■□□□□ 0.44
SSBP1-207ENST00000468267 ACOX2Q99424 681 aa17.81■□□□□ 0.44
SSBP1-207ENST00000468267 TRIM62Q9BVG3 475 aa17.81■□□□□ 0.44
SSBP1-207ENST00000468267 LHX5Q9H2C1 402 aa17.81■□□□□ 0.44
SSBP1-207ENST00000468267 ARRDC1-AS1Q9H2J1 176 aa17.81■□□□□ 0.44
SSBP1-207ENST00000468267 CLEC4EQ9ULY5 219 aa17.81■□□□□ 0.44
SSBP1-207ENST00000468267 NAALADL1Q9UQQ1 740 aa17.81■□□□□ 0.44
SSBP1-207ENST00000468267 CNOT1A5YKK6 2376 aaKnown RBP17.81■□□□□ 0.44
SSBP1-207ENST00000468267 A0A1W2PQF6 199 aa17.8■□□□□ 0.44
SSBP1-207ENST00000468267 TCRBV21S2A2A0A5A6 115 aa17.8■□□□□ 0.44
SSBP1-207ENST00000468267 PES1O00541 588 aaKnown RBP17.8■□□□□ 0.44
SSBP1-207ENST00000468267 TSPAN3O60637 253 aa17.8■□□□□ 0.44
SSBP1-207ENST00000468267 HOXB2P14652 356 aa17.8■□□□□ 0.44
SSBP1-207ENST00000468267 HOXD9P28356 352 aaPredicted RBP17.8■□□□□ 0.44
SSBP1-207ENST00000468267 ELF2Q15723 593 aa17.8■□□□□ 0.44
SSBP1-207ENST00000468267 GEN1Q17RS7 908 aa17.8■□□□□ 0.44
SSBP1-207ENST00000468267 RSPO4Q2I0M5 234 aaPredicted RBP17.8■□□□□ 0.44
SSBP1-207ENST00000468267 KLHDC7AQ5VTJ3 777 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms