RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 NIPA2Q8N8Q9 360 aa15.83■□□□□ 0.12
SNIP1-202ENST00000468040 FAM172AQ8WUF8 416 aa15.83■□□□□ 0.12
SNIP1-202ENST00000468040 CENPIQ92674 756 aaPredicted RBP15.83■□□□□ 0.12
SNIP1-202ENST00000468040 NXPE3Q969Y0 559 aa15.83■□□□□ 0.12
SNIP1-202ENST00000468040 ASB2Q96Q27 587 aa15.83■□□□□ 0.12
SNIP1-202ENST00000468040 TRIM7Q9C029 511 aa15.83■□□□□ 0.12
SNIP1-202ENST00000468040 LACRTQ9GZZ8 138 aa15.83■□□□□ 0.12
SNIP1-202ENST00000468040 GKN1Q9NS71 199 aa15.83■□□□□ 0.12
SNIP1-202ENST00000468040 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.83■□□□□ 0.12
SNIP1-202ENST00000468040 CFAP97Q9P2B7 532 aa15.83■□□□□ 0.12
SNIP1-202ENST00000468040 TFR2Q9UP52 801 aa15.83■□□□□ 0.12
SNIP1-202ENST00000468040 CCL26Q9Y258 94 aa15.83■□□□□ 0.12
SNIP1-202ENST00000468040 PPP2R2CQ9Y2T4 447 aa15.83■□□□□ 0.12
SNIP1-202ENST00000468040 SH3BP1Q9Y3L3 701 aa15.83■□□□□ 0.12
SNIP1-202ENST00000468040 XIRP2A4UGR9 3374 aa15.83■□□□□ 0.12
SNIP1-202ENST00000468040 SYNJ2BP-COX16A0A087WUM0 186 aa15.82■□□□□ 0.12
SNIP1-202ENST00000468040 E2F8A0AVK6 867 aa15.82■□□□□ 0.12
SNIP1-202ENST00000468040 HEPACAM2A8MVW5 462 aa15.82■□□□□ 0.12
SNIP1-202ENST00000468040 STC2O76061 302 aa15.82■□□□□ 0.12
SNIP1-202ENST00000468040 APOEP02649 317 aa15.82■□□□□ 0.12
SNIP1-202ENST00000468040 HMBSP08397 361 aa15.82■□□□□ 0.12
SNIP1-202ENST00000468040 TFE3P19532 575 aaPredicted RBP15.82■□□□□ 0.12
SNIP1-202ENST00000468040 VIPR2P41587 438 aa15.82■□□□□ 0.12
SNIP1-202ENST00000468040 CXCR3P49682 368 aa15.82■□□□□ 0.12
SNIP1-202ENST00000468040 ZXDBP98169 803 aa15.82■□□□□ 0.12
SNIP1-202ENST00000468040 ZNF252P-AS1Q0IIN9 211 aa15.82■□□□□ 0.12
SNIP1-202ENST00000468040 PPP2R5DQ14738 602 aa15.82■□□□□ 0.12
SNIP1-202ENST00000468040 ZNF77Q15935 545 aa15.82■□□□□ 0.12
SNIP1-202ENST00000468040 IFI16Q16666 785 aaKnown RBP15.82■□□□□ 0.12
SNIP1-202ENST00000468040 BRMS1LQ5PSV4 323 aa15.82■□□□□ 0.12
SNIP1-202ENST00000468040 BPIFB1Q8TDL5 484 aa15.82■□□□□ 0.12
SNIP1-202ENST00000468040 RNF34Q969K3 372 aa15.82■□□□□ 0.12
SNIP1-202ENST00000468040 SLC39A13Q96H72 371 aa15.82■□□□□ 0.12
SNIP1-202ENST00000468040 FCRL2Q96LA5 508 aaPredicted RBP15.82■□□□□ 0.12
SNIP1-202ENST00000468040 DCLK3Q9C098 648 aa15.82■□□□□ 0.12
SNIP1-202ENST00000468040 WDCPQ9H6R7 721 aa15.82■□□□□ 0.12
SNIP1-202ENST00000468040 PIGVQ9NUD9 493 aa15.82■□□□□ 0.12
SNIP1-202ENST00000468040 COX16Q9P0S2 106 aa15.82■□□□□ 0.12
SNIP1-202ENST00000468040 ZNF510Q9Y2H8 683 aa15.82■□□□□ 0.12
SNIP1-202ENST00000468040 LOC730098B7Z3J9 87 aa15.81■□□□□ 0.12
SNIP1-202ENST00000468040 ZSCAN12O43309 604 aa15.81■□□□□ 0.12
SNIP1-202ENST00000468040 PROSCO94903 275 aa15.81■□□□□ 0.12
SNIP1-202ENST00000468040 LATS1O95835 1130 aa15.81■□□□□ 0.12
SNIP1-202ENST00000468040 IRF1P10914 325 aa15.81■□□□□ 0.12
SNIP1-202ENST00000468040 CORO1AP31146 461 aaKnown RBP15.81■□□□□ 0.12
SNIP1-202ENST00000468040 MAN1A1P33908 653 aa15.81■□□□□ 0.12
SNIP1-202ENST00000468040 NAP1L1P55209 391 aaKnown RBP15.81■□□□□ 0.12
SNIP1-202ENST00000468040 HDAC4P56524 1084 aa15.81■□□□□ 0.12
SNIP1-202ENST00000468040 ZP2Q05996 745 aa15.81■□□□□ 0.12
SNIP1-202ENST00000468040 HTR4Q13639 388 aa15.81■□□□□ 0.12
SNIP1-202ENST00000468040 TANGO2Q6ICL3 276 aa15.81■□□□□ 0.12
SNIP1-202ENST00000468040 CC2D1AQ6P1N0 951 aaPredicted RBP15.81■□□□□ 0.12
SNIP1-202ENST00000468040 PARM1Q6UWI2 310 aa15.81■□□□□ 0.12
SNIP1-202ENST00000468040 HTR3DQ70Z44 454 aa15.81■□□□□ 0.12
SNIP1-202ENST00000468040 RNF10Q8N5U6 811 aaKnown RBP15.81■□□□□ 0.12
SNIP1-202ENST00000468040 TTC16Q8NEE8 873 aa15.81■□□□□ 0.12
SNIP1-202ENST00000468040 ADAMTS19Q8TE59 1207 aa15.81■□□□□ 0.12
SNIP1-202ENST00000468040 DEPDC1BQ8WUY9 529 aa15.81■□□□□ 0.12
SNIP1-202ENST00000468040 FGF14Q92915 247 aa15.81■□□□□ 0.12
SNIP1-202ENST00000468040 BTBD6Q96KE9 485 aa15.81■□□□□ 0.12
SNIP1-202ENST00000468040 ADAM33Q9BZ11 813 aa15.81■□□□□ 0.12
SNIP1-202ENST00000468040 THG1LQ9NWX6 298 aaKnown RBP15.81■□□□□ 0.12
SNIP1-202ENST00000468040 CALCOCO1Q9P1Z2 691 aa15.81■□□□□ 0.12
SNIP1-202ENST00000468040 IGSF9Q9P2J2 1179 aa15.81■□□□□ 0.12
SNIP1-202ENST00000468040 TBC1D14Q9P2M4 693 aa15.81■□□□□ 0.12
SNIP1-202ENST00000468040 SLC12A6Q9UHW9 1150 aa15.81■□□□□ 0.12
SNIP1-202ENST00000468040 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.81■□□□□ 0.12
SNIP1-202ENST00000468040 NUMBLQ9Y6R0 609 aa15.81■□□□□ 0.12
SNIP1-202ENST00000468040 SLC9A3R1O14745 358 aaPredicted RBP15.8■□□□□ 0.12
SNIP1-202ENST00000468040 PSMC3P17980 439 aa15.8■□□□□ 0.12
SNIP1-202ENST00000468040 PCK1P35558 622 aa15.8■□□□□ 0.12
SNIP1-202ENST00000468040 SLC11A2P49281 568 aa15.8■□□□□ 0.12
SNIP1-202ENST00000468040 AIF1P55008 147 aa15.8■□□□□ 0.12
SNIP1-202ENST00000468040 MESDQ14696 234 aa15.8■□□□□ 0.12
SNIP1-202ENST00000468040 ARL13BQ3SXY8 428 aa15.8■□□□□ 0.12
SNIP1-202ENST00000468040 ARHGAP29Q52LW3 1261 aa15.8■□□□□ 0.12
SNIP1-202ENST00000468040 HS1BP3Q53T59 392 aa15.8■□□□□ 0.12
SNIP1-202ENST00000468040 ZC3H12AQ5D1E8 599 aaKnown RBP15.8■□□□□ 0.12
SNIP1-202ENST00000468040 SH3PXD2AQ5TCZ1 1133 aa15.8■□□□□ 0.12
SNIP1-202ENST00000468040 VITQ6UXI7 678 aa15.8■□□□□ 0.12
SNIP1-202ENST00000468040 MFSD6LQ8IWD5 586 aa15.8■□□□□ 0.12
SNIP1-202ENST00000468040 YAF2Q8IY57 180 aa15.8■□□□□ 0.12
SNIP1-202ENST00000468040 ATP6V0D2Q8N8Y2 350 aa15.8■□□□□ 0.12
SNIP1-202ENST00000468040 AZIN2Q96A70 460 aa15.8■□□□□ 0.12
SNIP1-202ENST00000468040 RSPRY1Q96DX4 576 aa15.8■□□□□ 0.12
SNIP1-202ENST00000468040 TRIM44Q96DX7 344 aaPredicted RBP15.8■□□□□ 0.12
SNIP1-202ENST00000468040 BTN2A3PQ96KV6 586 aa15.8■□□□□ 0.12
SNIP1-202ENST00000468040 KXD1Q9BQD3 176 aa15.8■□□□□ 0.12
SNIP1-202ENST00000468040 LIMD1Q9UGP4 676 aa15.8■□□□□ 0.12
SNIP1-202ENST00000468040 DUSP10Q9Y6W6 482 aa15.8■□□□□ 0.12
SNIP1-202ENST00000468040 PRUNE2Q8WUY3 3088 aa15.8■□□□□ 0.12
SNIP1-202ENST00000468040 MACROD2A1Z1Q3 448 aa15.79■□□□□ 0.12
SNIP1-202ENST00000468040 KCNU1A8MYU2 1149 aa15.79■□□□□ 0.12
SNIP1-202ENST00000468040 LRCH4O75427 683 aa15.79■□□□□ 0.12
SNIP1-202ENST00000468040 KLKB1P03952 638 aa15.79■□□□□ 0.12
SNIP1-202ENST00000468040 BMP1P13497 986 aa15.79■□□□□ 0.12
SNIP1-202ENST00000468040 SLC1A1P43005 524 aa15.79■□□□□ 0.12
SNIP1-202ENST00000468040 ATXN1P54253 815 aaKnown RBP15.79■□□□□ 0.12
SNIP1-202ENST00000468040 FCHO2Q0JRZ9 810 aa15.79■□□□□ 0.12
SNIP1-202ENST00000468040 ACBD5Q5T8D3 534 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms