RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 EIF2DP41214 584 aaKnown RBP11.51□□□□□ -0.57
MSH5-212ENST00000467319 MATKP42679 507 aa11.51□□□□□ -0.57
MSH5-212ENST00000467319 VCPP55072 806 aaKnown RBP11.51□□□□□ -0.57
MSH5-212ENST00000467319 FZD5Q13467 585 aa11.51□□□□□ -0.57
MSH5-212ENST00000467319 DCAF6Q58WW2 860 aa11.51□□□□□ -0.57
MSH5-212ENST00000467319 TMEM196Q5HYL7 178 aa11.51□□□□□ -0.57
MSH5-212ENST00000467319 LY6G5CQ5SRR4 150 aa11.51□□□□□ -0.57
MSH5-212ENST00000467319 PPP1R15BQ5SWA1 713 aa11.51□□□□□ -0.57
MSH5-212ENST00000467319 NUGGCQ68CJ6 796 aa11.51□□□□□ -0.57
MSH5-212ENST00000467319 NAIF1Q69YI7 327 aaPredicted RBP11.51□□□□□ -0.57
MSH5-212ENST00000467319 ASTLQ6HA08 431 aaPredicted RBP11.51□□□□□ -0.57
MSH5-212ENST00000467319 ACAD10Q6JQN1 1059 aa11.51□□□□□ -0.57
MSH5-212ENST00000467319 PPP1R2P3Q6NXS1 205 aa11.51□□□□□ -0.57
MSH5-212ENST00000467319 WDR59Q6PJI9 974 aa11.51□□□□□ -0.57
MSH5-212ENST00000467319 ZNF852Q6ZMS4 543 aa11.51□□□□□ -0.57
MSH5-212ENST00000467319 MCOLN2Q8IZK6 566 aa11.51□□□□□ -0.57
MSH5-212ENST00000467319 PHTF2Q8N3S3 785 aa11.51□□□□□ -0.57
MSH5-212ENST00000467319 CPXM2Q8N436 756 aa11.51□□□□□ -0.57
MSH5-212ENST00000467319 TMEM105Q8N8V8 129 aa11.51□□□□□ -0.57
MSH5-212ENST00000467319 TTC8Q8TAM2 541 aa11.51□□□□□ -0.57
MSH5-212ENST00000467319 ADAM32Q8TC27 787 aa11.51□□□□□ -0.57
MSH5-212ENST00000467319 CLDN23Q96B33 292 aa11.51□□□□□ -0.57
MSH5-212ENST00000467319 PGAP3Q96FM1 320 aaPredicted RBP11.51□□□□□ -0.57
MSH5-212ENST00000467319 ANP32EQ9BTT0 268 aa11.51□□□□□ -0.57
MSH5-212ENST00000467319 TRIM5Q9C035 493 aa11.51□□□□□ -0.57
MSH5-212ENST00000467319 MFSD1Q9H3U5 465 aa11.51□□□□□ -0.57
MSH5-212ENST00000467319 SPHK2Q9NRA0 654 aa11.51□□□□□ -0.57
MSH5-212ENST00000467319 SEPT11Q9NVA2 429 aaKnown RBP11.51□□□□□ -0.57
MSH5-212ENST00000467319 RRN3Q9NYV6 651 aa11.51□□□□□ -0.57
MSH5-212ENST00000467319 ADAM22Q9P0K1 906 aa11.51□□□□□ -0.57
MSH5-212ENST00000467319 CALCOCO1Q9P1Z2 691 aa11.51□□□□□ -0.57
MSH5-212ENST00000467319 ARHGAP20Q9P2F6 1191 aa11.51□□□□□ -0.57
MSH5-212ENST00000467319 WDR35Q9P2L0 1181 aa11.51□□□□□ -0.57
MSH5-212ENST00000467319 ZNF510Q9Y2H8 683 aa11.51□□□□□ -0.57
MSH5-212ENST00000467319 GOLGA8SH3BPF8 625 aa11.5□□□□□ -0.57
MSH5-212ENST00000467319 TRDMT1O14717 391 aaKnown RBP11.5□□□□□ -0.57
MSH5-212ENST00000467319 CAPN9O14815 690 aa11.5□□□□□ -0.57
MSH5-212ENST00000467319 CACNG3O60359 315 aa11.5□□□□□ -0.57
MSH5-212ENST00000467319 PENKP01210 267 aaPredicted RBP11.5□□□□□ -0.57
MSH5-212ENST00000467319 GZMAP12544 262 aa11.5□□□□□ -0.57
MSH5-212ENST00000467319 TFE3P19532 575 aaPredicted RBP11.5□□□□□ -0.57
MSH5-212ENST00000467319 TNFAIP3P21580 790 aa11.5□□□□□ -0.57
MSH5-212ENST00000467319 CD72P21854 359 aa11.5□□□□□ -0.57
MSH5-212ENST00000467319 NOS2P35228 1153 aa11.5□□□□□ -0.57
MSH5-212ENST00000467319 HARS2P49590 506 aaKnown RBP11.5□□□□□ -0.57
MSH5-212ENST00000467319 TBX4P57082 545 aa11.5□□□□□ -0.57
MSH5-212ENST00000467319 CDK17Q00537 523 aa11.5□□□□□ -0.57
MSH5-212ENST00000467319 CCINQ13939 588 aa11.5□□□□□ -0.57
MSH5-212ENST00000467319 TDRD12Q587J7 1177 aaKnown RBP11.5□□□□□ -0.57
MSH5-212ENST00000467319 FAM133BQ5BKY9 247 aaKnown RBP11.5□□□□□ -0.57
MSH5-212ENST00000467319 C12orf40Q86WS4 652 aa11.5□□□□□ -0.57
MSH5-212ENST00000467319 TMEM25Q86YD3 366 aa11.5□□□□□ -0.57
MSH5-212ENST00000467319 DENND1CQ8IV53 801 aa11.5□□□□□ -0.57
MSH5-212ENST00000467319 DRC7Q8IY82 874 aa11.5□□□□□ -0.57
MSH5-212ENST00000467319 FLCNQ8NFG4 579 aa11.5□□□□□ -0.57
MSH5-212ENST00000467319 CPLX3Q8WVH0 158 aa11.5□□□□□ -0.57
MSH5-212ENST00000467319 FAM3CQ92520 227 aa11.5□□□□□ -0.57
MSH5-212ENST00000467319 EZH1Q92800 747 aaPredicted RBP11.5□□□□□ -0.57
MSH5-212ENST00000467319 AZIN2Q96A70 460 aa11.5□□□□□ -0.57
MSH5-212ENST00000467319 VCPIP1Q96JH7 1222 aa11.5□□□□□ -0.57
MSH5-212ENST00000467319 FAM204AQ9H8W3 233 aa11.5□□□□□ -0.57
MSH5-212ENST00000467319 METTL5Q9NRN9 209 aaKnown RBP11.5□□□□□ -0.57
MSH5-212ENST00000467319 ABHD10Q9NUJ1 306 aa11.5□□□□□ -0.57
MSH5-212ENST00000467319 DDIT4Q9NX09 232 aa11.5□□□□□ -0.57
MSH5-212ENST00000467319 MRPS17Q9Y2R5 130 aaKnown RBP11.5□□□□□ -0.57
MSH5-212ENST00000467319 MTF2Q9Y483 593 aaPredicted RBP11.5□□□□□ -0.57
MSH5-212ENST00000467319 CACNA1HO95180 2353 aa11.5□□□□□ -0.57
MSH5-212ENST00000467319 C2CD4BA6NLJ0 364 aa11.49□□□□□ -0.57
MSH5-212ENST00000467319 KCNU1A8MYU2 1149 aa11.49□□□□□ -0.57
MSH5-212ENST00000467319 PI15O43692 258 aa11.49□□□□□ -0.57
MSH5-212ENST00000467319 CHRNB1P11230 501 aa11.49□□□□□ -0.57
MSH5-212ENST00000467319 RRM1P23921 792 aa11.49□□□□□ -0.57
MSH5-212ENST00000467319 RPS9P46781 194 aaKnown RBP11.49□□□□□ -0.57
MSH5-212ENST00000467319 MESP2Q0VG99 397 aa11.49□□□□□ -0.57
MSH5-212ENST00000467319 NR1H3Q13133 447 aa11.49□□□□□ -0.57
MSH5-212ENST00000467319 PPP2R5DQ14738 602 aa11.49□□□□□ -0.57
MSH5-212ENST00000467319 UBXN2BQ14CS0 331 aa11.49□□□□□ -0.57
MSH5-212ENST00000467319 ASTE1Q2TB18 679 aaPredicted RBP11.49□□□□□ -0.57
MSH5-212ENST00000467319 SLC25A52Q3SY17 297 aa11.49□□□□□ -0.57
MSH5-212ENST00000467319 FYB2Q5VWT5 728 aa11.49□□□□□ -0.57
MSH5-212ENST00000467319 NADSYN1Q6IA69 706 aa11.49□□□□□ -0.57
MSH5-212ENST00000467319 FSTL4Q6MZW2 842 aa11.49□□□□□ -0.57
MSH5-212ENST00000467319 TMC6Q7Z403 805 aa11.49□□□□□ -0.57
MSH5-212ENST00000467319 CNGA4Q8IV77 575 aa11.49□□□□□ -0.57
MSH5-212ENST00000467319 UNC45BQ8IWX7 931 aa11.49□□□□□ -0.57
MSH5-212ENST00000467319 SUGP1Q8IWZ8 645 aaKnown RBP11.49□□□□□ -0.57
MSH5-212ENST00000467319 EMC1Q8N766 993 aa11.49□□□□□ -0.57
MSH5-212ENST00000467319 OR8K1Q8NGG5 319 aa11.49□□□□□ -0.57
MSH5-212ENST00000467319 JOSD2Q8TAC2 188 aa11.49□□□□□ -0.57
MSH5-212ENST00000467319 PRICKLE1Q96MT3 831 aaPredicted RBP11.49□□□□□ -0.57
MSH5-212ENST00000467319 TBCBQ99426 244 aa11.49□□□□□ -0.57
MSH5-212ENST00000467319 NELL2Q99435 816 aa11.49□□□□□ -0.57
MSH5-212ENST00000467319 IRX2Q9BZI1 471 aaPredicted RBP11.49□□□□□ -0.57
MSH5-212ENST00000467319 ISCUQ9H1K1 167 aa11.49□□□□□ -0.57
MSH5-212ENST00000467319 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.49□□□□□ -0.57
MSH5-212ENST00000467319 STAP1Q9ULZ2 295 aa11.49□□□□□ -0.57
MSH5-212ENST00000467319 A0A087X0T9 212 aa11.48□□□□□ -0.57
MSH5-212ENST00000467319 SSU72P8A0A1W2PR75 194 aa11.48□□□□□ -0.57
MSH5-212ENST00000467319 SIGLEC16A6NMB1 481 aa11.48□□□□□ -0.57
MSH5-212ENST00000467319 FAM170BA6NMN3 283 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms