RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 KLF16Q9BXK1 252 aaPredicted RBP16.56■□□□□ 0.24
TSSC4-208ENST00000467308 CSNK1G1Q9HCP0 422 aa16.56■□□□□ 0.24
TSSC4-208ENST00000467308 CYLDQ9NQC7 956 aa16.56■□□□□ 0.24
TSSC4-208ENST00000467308 TLR8Q9NR97 1041 aaKnown RBP16.56■□□□□ 0.24
TSSC4-208ENST00000467308 KRT82Q9NSB4 513 aa16.56■□□□□ 0.24
TSSC4-208ENST00000467308 ITPR1Q14643 2758 aa16.56■□□□□ 0.24
TSSC4-208ENST00000467308 ACACAQ13085 2346 aa16.56■□□□□ 0.24
TSSC4-208ENST00000467308 ADAMTS20P59510 1910 aa16.55■□□□□ 0.24
TSSC4-208ENST00000467308 LRRC10BA6NIK2 292 aa16.55■□□□□ 0.24
TSSC4-208ENST00000467308 NDUFS2O75306 463 aa16.55■□□□□ 0.24
TSSC4-208ENST00000467308 GNA14O95837 355 aa16.55■□□□□ 0.24
TSSC4-208ENST00000467308 EEF1GP26641 437 aaKnown RBP16.55■□□□□ 0.24
TSSC4-208ENST00000467308 MARSP56192 900 aaKnown RBP16.55■□□□□ 0.24
TSSC4-208ENST00000467308 MCCD1P59942 119 aaPredicted RBP16.55■□□□□ 0.24
TSSC4-208ENST00000467308 CLDN10P78369 228 aa16.55■□□□□ 0.24
TSSC4-208ENST00000467308 ZNF667Q5HYK9 610 aa16.55■□□□□ 0.24
TSSC4-208ENST00000467308 WDR45BQ5MNZ6 344 aa16.55■□□□□ 0.24
TSSC4-208ENST00000467308 RGL4Q8IZJ4 473 aa16.55■□□□□ 0.24
TSSC4-208ENST00000467308 ZMIZ2Q8NF64 920 aa16.55■□□□□ 0.24
TSSC4-208ENST00000467308 ADAMTS14Q8WXS8 1223 aa16.55■□□□□ 0.24
TSSC4-208ENST00000467308 SMOQ99835 787 aa16.55■□□□□ 0.24
TSSC4-208ENST00000467308 SRRTQ9BXP5 876 aaKnown RBP16.55■□□□□ 0.24
TSSC4-208ENST00000467308 ZDHHC5Q9C0B5 715 aa16.55■□□□□ 0.24
TSSC4-208ENST00000467308 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.55■□□□□ 0.244e-20■■■■■ 484.4
TSSC4-208ENST00000467308 SAMSN1Q9NSI8 373 aaKnown RBP16.55■□□□□ 0.24
TSSC4-208ENST00000467308 PRRT4C9JH25 899 aa16.54■□□□□ 0.24
TSSC4-208ENST00000467308 CETN3O15182 167 aa16.54■□□□□ 0.24
TSSC4-208ENST00000467308 MAPK13O15264 365 aa16.54■□□□□ 0.24
TSSC4-208ENST00000467308 SLC16A3O15427 465 aaKnown RBP16.54■□□□□ 0.24
TSSC4-208ENST00000467308 SH3BP5O60239 455 aa16.54■□□□□ 0.24
TSSC4-208ENST00000467308 NR3C1P04150 777 aa16.54■□□□□ 0.24
TSSC4-208ENST00000467308 ATP5C1P36542 298 aaKnown RBP16.54■□□□□ 0.24
TSSC4-208ENST00000467308 DGKGP49619 791 aa16.54■□□□□ 0.24
TSSC4-208ENST00000467308 PGFP49763 221 aa16.54■□□□□ 0.24
TSSC4-208ENST00000467308 ADAM9Q13443 819 aa16.54■□□□□ 0.24
TSSC4-208ENST00000467308 BIRC3Q13489 604 aa16.54■□□□□ 0.24
TSSC4-208ENST00000467308 NCOA4Q13772 614 aa16.54■□□□□ 0.24
TSSC4-208ENST00000467308 KLHDC10Q6PID8 442 aa16.54■□□□□ 0.24
TSSC4-208ENST00000467308 TOGARAM2Q6ZUX3 1019 aa16.54■□□□□ 0.24
TSSC4-208ENST00000467308 ACOT1Q86TX2 421 aa16.54■□□□□ 0.24
TSSC4-208ENST00000467308 METTL3Q86U44 580 aaKnown RBP16.54■□□□□ 0.24
TSSC4-208ENST00000467308 CAMK1GQ96NX5 476 aa16.54■□□□□ 0.24
TSSC4-208ENST00000467308 LSM7Q9UK45 103 aaKnown RBP16.54■□□□□ 0.24
TSSC4-208ENST00000467308 PCDHB9Q9Y5E1 797 aa16.54■□□□□ 0.24
TSSC4-208ENST00000467308 LOC400499M0QZD8 3231 aa16.53■□□□□ 0.24
TSSC4-208ENST00000467308 PLXNB3Q9ULL4 1909 aa16.53■□□□□ 0.24
TSSC4-208ENST00000467308 BEST1O76090 585 aa16.53■□□□□ 0.24
TSSC4-208ENST00000467308 TBX18O95935 607 aa16.53■□□□□ 0.24
TSSC4-208ENST00000467308 CISD3P0C7P0 127 aa16.53■□□□□ 0.24
TSSC4-208ENST00000467308 P4HA1P13674 534 aa16.53■□□□□ 0.24
TSSC4-208ENST00000467308 NR2F2P24468 414 aa16.53■□□□□ 0.24
TSSC4-208ENST00000467308 CD6P30203 668 aa16.53■□□□□ 0.24
TSSC4-208ENST00000467308 ZNF132P52740 706 aa16.53■□□□□ 0.24
TSSC4-208ENST00000467308 SCAPQ12770 1279 aa16.53■□□□□ 0.24
TSSC4-208ENST00000467308 TCP11X2Q5H9J9 407 aa16.53■□□□□ 0.24
TSSC4-208ENST00000467308 TPGS1Q6ZTW0 290 aa16.53■□□□□ 0.24
TSSC4-208ENST00000467308 NAXDQ8IW45 347 aa16.53■□□□□ 0.24
TSSC4-208ENST00000467308 CRYBG2Q8N1P7 616 aa16.53■□□□□ 0.24
TSSC4-208ENST00000467308 SLC2A14Q8TDB8 520 aa16.53■□□□□ 0.24
TSSC4-208ENST00000467308 PARD3BQ8TEW8 1205 aa16.53■□□□□ 0.24
TSSC4-208ENST00000467308 DNASE2BQ8WZ79 361 aa16.53■□□□□ 0.24
TSSC4-208ENST00000467308 SDCBP2Q9H190 292 aa16.53■□□□□ 0.24
TSSC4-208ENST00000467308 CACNA2D2Q9NY47 1150 aa16.53■□□□□ 0.24
TSSC4-208ENST00000467308 LIMA1Q9UHB6 759 aaKnown RBP16.53■□□□□ 0.24
TSSC4-208ENST00000467308 SCML2Q9UQR0 700 aa16.53■□□□□ 0.24
TSSC4-208ENST00000467308 GPSM3Q9Y4H4 160 aa16.53■□□□□ 0.24
TSSC4-208ENST00000467308 RAD54BQ9Y620 910 aa16.53■□□□□ 0.24
TSSC4-208ENST00000467308 CELSR3Q9NYQ7 3312 aa16.53■□□□□ 0.24
TSSC4-208ENST00000467308 NPC1O15118 1278 aa16.52■□□□□ 0.24
TSSC4-208ENST00000467308 EXOC3O60645 756 aa16.52■□□□□ 0.24
TSSC4-208ENST00000467308 C4BPAP04003 597 aaKnown RBP16.52■□□□□ 0.24
TSSC4-208ENST00000467308 FTH1P19P0C7X4 201 aa16.52■□□□□ 0.24
TSSC4-208ENST00000467308 CCDC130P13994 396 aa16.52■□□□□ 0.24
TSSC4-208ENST00000467308 PRKCSHP14314 528 aaPredicted RBP16.52■□□□□ 0.24
TSSC4-208ENST00000467308 CASP4P49662 377 aa16.52■□□□□ 0.24
TSSC4-208ENST00000467308 MAP3K7CLP57077 242 aa16.52■□□□□ 0.24
TSSC4-208ENST00000467308 ENPEPQ07075 957 aa16.52■□□□□ 0.24
TSSC4-208ENST00000467308 GRIK2Q13002 908 aa16.52■□□□□ 0.24
TSSC4-208ENST00000467308 SCARA5Q6ZMJ2 495 aa16.52■□□□□ 0.24
TSSC4-208ENST00000467308 CCNI2Q6ZMN8 369 aaPredicted RBP16.52■□□□□ 0.24
TSSC4-208ENST00000467308 APTXQ7Z2E3 356 aaKnown RBP16.52■□□□□ 0.24
TSSC4-208ENST00000467308 GLRX5Q86SX6 157 aa16.52■□□□□ 0.24
TSSC4-208ENST00000467308 UNC93AQ86WB7 457 aa16.52■□□□□ 0.24
TSSC4-208ENST00000467308 ANKRD20A12PQ8NF67 263 aa16.52■□□□□ 0.24
TSSC4-208ENST00000467308 CADM4Q8NFZ8 388 aa16.52■□□□□ 0.24
TSSC4-208ENST00000467308 PLEKHO2Q8TD55 490 aa16.52■□□□□ 0.24
TSSC4-208ENST00000467308 SLC6A17Q9H1V8 727 aa16.52■□□□□ 0.24
TSSC4-208ENST00000467308 CD93Q9NPY3 652 aa16.52■□□□□ 0.24
TSSC4-208ENST00000467308 USP36Q9P275 1121 aaKnown RBP16.52■□□□□ 0.24
TSSC4-208ENST00000467308 FBXO10Q9UK96 956 aa16.52■□□□□ 0.24
TSSC4-208ENST00000467308 APC2O95996 2303 aa16.52■□□□□ 0.23
TSSC4-208ENST00000467308 PTPRBP23467 1997 aa16.51■□□□□ 0.23
TSSC4-208ENST00000467308 A0A1B0GTW7 788 aa16.51■□□□□ 0.23
TSSC4-208ENST00000467308 LRRIQ3A6PVS8 624 aaPredicted RBP16.51■□□□□ 0.23
TSSC4-208ENST00000467308 KCNJ18B7U540 433 aa16.51■□□□□ 0.23
TSSC4-208ENST00000467308 CBFA2T3O75081 653 aa16.51■□□□□ 0.23
TSSC4-208ENST00000467308 CLSTN1O94985 981 aa16.51■□□□□ 0.23
TSSC4-208ENST00000467308 ATP1A3P13637 1013 aa16.51■□□□□ 0.23
TSSC4-208ENST00000467308 CDK11BP21127 795 aaKnown RBP16.51■□□□□ 0.23
TSSC4-208ENST00000467308 PLA2G4AP47712 749 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms