RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 CAMK2GQ13555 558 aaPredicted RBP12.82□□□□□ -0.36
UBR4-211ENST00000467272 ZNF234Q14588 700 aa12.82□□□□□ -0.36
UBR4-211ENST00000467272 STARD3Q14849 445 aa12.82□□□□□ -0.36
UBR4-211ENST00000467272 EIF4HQ15056 248 aaKnown RBP12.82□□□□□ -0.36
UBR4-211ENST00000467272 KNOP1Q1ED39 458 aaKnown RBP12.82□□□□□ -0.36
UBR4-211ENST00000467272 SGSM1Q2NKQ1 1148 aa12.82□□□□□ -0.36
UBR4-211ENST00000467272 KIF19Q2TAC6 998 aa12.82□□□□□ -0.36
UBR4-211ENST00000467272 SHC4Q6S5L8 630 aa12.82□□□□□ -0.36
UBR4-211ENST00000467272 SCARA5Q6ZMJ2 495 aa12.82□□□□□ -0.36
UBR4-211ENST00000467272 KIAA0907Q7Z7F0 614 aaPredicted RBP12.82□□□□□ -0.36
UBR4-211ENST00000467272 NELFCDQ8IXH7 590 aa12.82□□□□□ -0.36
UBR4-211ENST00000467272 ADAM32Q8TC27 787 aa12.82□□□□□ -0.36
UBR4-211ENST00000467272 SETD7Q8WTS6 366 aaKnown RBP12.82□□□□□ -0.36
UBR4-211ENST00000467272 TAF4BQ92750 862 aa12.82□□□□□ -0.36
UBR4-211ENST00000467272 SIPA1Q96FS4 1042 aa12.82□□□□□ -0.36
UBR4-211ENST00000467272 CRELD1Q96HD1 420 aa12.82□□□□□ -0.36
UBR4-211ENST00000467272 LRIG1Q96JA1 1093 aa12.82□□□□□ -0.36
UBR4-211ENST00000467272 BACH2Q9BYV9 841 aa12.82□□□□□ -0.36
UBR4-211ENST00000467272 TMEM245Q9H330 911 aa12.82□□□□□ -0.36
UBR4-211ENST00000467272 FAM49BQ9NUQ9 324 aa12.82□□□□□ -0.36
UBR4-211ENST00000467272 ELOVL2Q9NXB9 296 aa12.82□□□□□ -0.36
UBR4-211ENST00000467272 TFIP11Q9UBB9 837 aaKnown RBP12.82□□□□□ -0.36
UBR4-211ENST00000467272 NUDT5Q9UKK9 219 aa12.82□□□□□ -0.36
UBR4-211ENST00000467272 AGO1Q9UL18 857 aaKnown RBP12.82□□□□□ -0.36
UBR4-211ENST00000467272 ZNF510Q9Y2H8 683 aa12.82□□□□□ -0.36
UBR4-211ENST00000467272 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.82□□□□□ -0.36
UBR4-211ENST00000467272 PTPRQQ9UMZ3 2332 aa12.81□□□□□ -0.36
UBR4-211ENST00000467272 A0A1B0GVT2 93 aa12.81□□□□□ -0.36
UBR4-211ENST00000467272 PVALEFA0A1B0GWK0 134 aa12.81□□□□□ -0.36
UBR4-211ENST00000467272 E9PAM4 449 aa12.81□□□□□ -0.36
UBR4-211ENST00000467272 TNFSF14O43557 240 aa12.81□□□□□ -0.36
UBR4-211ENST00000467272 PPP6R2O75170 966 aa12.81□□□□□ -0.36
UBR4-211ENST00000467272 C1QL1O75973 258 aa12.81□□□□□ -0.36
UBR4-211ENST00000467272 FAM200BP0CF97 657 aa12.81□□□□□ -0.36
UBR4-211ENST00000467272 CSNK1EP49674 416 aaKnown RBP12.81□□□□□ -0.36
UBR4-211ENST00000467272 PSEN1P49768 467 aa12.81□□□□□ -0.36
UBR4-211ENST00000467272 AFF3P51826 1226 aaKnown RBP12.81□□□□□ -0.36
UBR4-211ENST00000467272 ASIC1P78348 528 aa12.81□□□□□ -0.36
UBR4-211ENST00000467272 CYP4F3Q08477 520 aa12.81□□□□□ -0.36
UBR4-211ENST00000467272 GOLGA8FQ08AF8 430 aa12.81□□□□□ -0.36
UBR4-211ENST00000467272 GOLGA8DPQ0D2H9 430 aa12.81□□□□□ -0.36
UBR4-211ENST00000467272 KCNT1Q5JUK3 1230 aa12.81□□□□□ -0.36
UBR4-211ENST00000467272 SV2AQ7L0J3 742 aa12.81□□□□□ -0.36
UBR4-211ENST00000467272 ANKS1BQ7Z6G8 1248 aa12.81□□□□□ -0.36
UBR4-211ENST00000467272 GALNT15Q8N3T1 639 aa12.81□□□□□ -0.36
UBR4-211ENST00000467272 CPXM2Q8N436 756 aa12.81□□□□□ -0.36
UBR4-211ENST00000467272 PRCCQ92733 491 aaPredicted RBP12.81□□□□□ -0.36
UBR4-211ENST00000467272 BHMTQ93088 406 aa12.81□□□□□ -0.36
UBR4-211ENST00000467272 SLC2A11Q9BYW1 496 aa12.81□□□□□ -0.36
UBR4-211ENST00000467272 KCTD10Q9H3F6 313 aa12.81□□□□□ -0.36
UBR4-211ENST00000467272 C6orf106Q9H6K1 298 aaPredicted RBP12.81□□□□□ -0.36
UBR4-211ENST00000467272 STOML2Q9UJZ1 356 aa12.81□□□□□ -0.36
UBR4-211ENST00000467272 SNX11Q9Y5W9 270 aa12.81□□□□□ -0.36
UBR4-211ENST00000467272 MUC22E2RYF6 1773 aaPredicted RBP12.81□□□□□ -0.36
UBR4-211ENST00000467272 IKBKBO14920 756 aa12.8□□□□□ -0.36
UBR4-211ENST00000467272 TIMM44O43615 452 aa12.8□□□□□ -0.36
UBR4-211ENST00000467272 TSPAN3O60637 253 aa12.8□□□□□ -0.36
UBR4-211ENST00000467272 EXOC3O60645 756 aa12.8□□□□□ -0.36
UBR4-211ENST00000467272 PHACTR2O75167 634 aa12.8□□□□□ -0.36
UBR4-211ENST00000467272 CASP1P29466 404 aa12.8□□□□□ -0.36
UBR4-211ENST00000467272 ACSL1P33121 698 aa12.8□□□□□ -0.36
UBR4-211ENST00000467272 CHKAP35790 457 aa12.8□□□□□ -0.36
UBR4-211ENST00000467272 CTSKP43235 329 aa12.8□□□□□ -0.36
UBR4-211ENST00000467272 GRIA4P48058 902 aa12.8□□□□□ -0.36
UBR4-211ENST00000467272 AMPD3Q01432 767 aa12.8□□□□□ -0.36
UBR4-211ENST00000467272 PDE4CQ08493 712 aa12.8□□□□□ -0.36
UBR4-211ENST00000467272 BIRC3Q13489 604 aa12.8□□□□□ -0.36
UBR4-211ENST00000467272 RAB41Q5JT25 222 aa12.8□□□□□ -0.36
UBR4-211ENST00000467272 C10orf120Q5SQS8 335 aa12.8□□□□□ -0.36
UBR4-211ENST00000467272 SPOPLQ6IQ16 392 aa12.8□□□□□ -0.36
UBR4-211ENST00000467272 BHLHA9Q7RTU4 235 aa12.8□□□□□ -0.36
UBR4-211ENST00000467272 PDCD7Q8N8D1 485 aaKnown RBP12.8□□□□□ -0.36
UBR4-211ENST00000467272 IQUBQ8NA54 791 aa12.8□□□□□ -0.36
UBR4-211ENST00000467272 TMC2Q8TDI7 906 aa12.8□□□□□ -0.36
UBR4-211ENST00000467272 RHBDD1Q8TEB9 315 aa12.8□□□□□ -0.36
UBR4-211ENST00000467272 SORCS1Q8WY21 1168 aa12.8□□□□□ -0.36
UBR4-211ENST00000467272 IGSF8Q969P0 613 aa12.8□□□□□ -0.36
UBR4-211ENST00000467272 DUSP16Q9BY84 665 aa12.8□□□□□ -0.36
UBR4-211ENST00000467272 MIR1-1HGQ9H1L0 117 aa12.8□□□□□ -0.36
UBR4-211ENST00000467272 MAGEF1Q9HAY2 307 aa12.8□□□□□ -0.36
UBR4-211ENST00000467272 APOBEC3GQ9HC16 384 aaKnown RBP12.8□□□□□ -0.36
UBR4-211ENST00000467272 TM9SF3Q9HD45 589 aa12.8□□□□□ -0.36
UBR4-211ENST00000467272 SLC39A2Q9NP94 309 aa12.8□□□□□ -0.36
UBR4-211ENST00000467272 ANKRD6Q9Y2G4 727 aa12.8□□□□□ -0.36
UBR4-211ENST00000467272 KLRC4O43908 158 aa12.79□□□□□ -0.36
UBR4-211ENST00000467272 ADORA2BP29275 332 aa12.79□□□□□ -0.36
UBR4-211ENST00000467272 CORO1AP31146 461 aaKnown RBP12.79□□□□□ -0.36
UBR4-211ENST00000467272 COG7P83436 770 aa12.79□□□□□ -0.36
UBR4-211ENST00000467272 ZC3H3Q8IXZ2 948 aaKnown RBP12.79□□□□□ -0.36
UBR4-211ENST00000467272 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.79□□□□□ -0.36
UBR4-211ENST00000467272 KIAA0895Q8NCT3 520 aa12.79□□□□□ -0.36
UBR4-211ENST00000467272 OR2T3Q8NH03 318 aa12.79□□□□□ -0.36
UBR4-211ENST00000467272 GOLGA5Q8TBA6 731 aa12.79□□□□□ -0.36
UBR4-211ENST00000467272 DHX58Q96C10 678 aa12.79□□□□□ -0.36
UBR4-211ENST00000467272 CYFIP2Q96F07 1278 aa12.79□□□□□ -0.36
UBR4-211ENST00000467272 UBXN6Q9BZV1 441 aa12.79□□□□□ -0.36
UBR4-211ENST00000467272 DCLK3Q9C098 648 aa12.79□□□□□ -0.36
UBR4-211ENST00000467272 NAGPAQ9UK23 515 aa12.79□□□□□ -0.36
UBR4-211ENST00000467272 FAM149AA5PLN7 773 aa12.78□□□□□ -0.36
UBR4-211ENST00000467272 H0Y8X5 98 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms