RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 FAM204AQ9H8W3 233 aa16.66■□□□□ 0.26
GPC1-207ENST00000466624 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.66■□□□□ 0.26
GPC1-207ENST00000466624 THG1LQ9NWX6 298 aaKnown RBP16.66■□□□□ 0.26
GPC1-207ENST00000466624 DDIT4Q9NX09 232 aa16.66■□□□□ 0.26
GPC1-207ENST00000466624 TBC1D14Q9P2M4 693 aa16.66■□□□□ 0.26
GPC1-207ENST00000466624 LSM7Q9UK45 103 aaKnown RBP16.66■□□□□ 0.26
GPC1-207ENST00000466624 PAXBP1Q9Y5B6 917 aa16.66■□□□□ 0.26
GPC1-207ENST00000466624 COL4A2P08572 1712 aa16.65■□□□□ 0.26
GPC1-207ENST00000466624 SLC9A3R1O14745 358 aaPredicted RBP16.65■□□□□ 0.26
GPC1-207ENST00000466624 CHADO15335 359 aa16.65■□□□□ 0.26
GPC1-207ENST00000466624 MSI1O43347 362 aaKnown RBP16.65■□□□□ 0.26
GPC1-207ENST00000466624 MTA2O94776 668 aa16.65■□□□□ 0.26
GPC1-207ENST00000466624 SLC2A3P11169 496 aa16.65■□□□□ 0.26
GPC1-207ENST00000466624 RDXP35241 583 aaKnown RBP16.65■□□□□ 0.26
GPC1-207ENST00000466624 PPP2R5DQ14738 602 aa16.65■□□□□ 0.26
GPC1-207ENST00000466624 ACAP1Q15027 740 aa16.65■□□□□ 0.26
GPC1-207ENST00000466624 Q6ZNB5 142 aa16.65■□□□□ 0.26
GPC1-207ENST00000466624 GJD3Q8N144 294 aa16.65■□□□□ 0.26
GPC1-207ENST00000466624 SLC44A3Q8N4M1 653 aa16.65■□□□□ 0.26
GPC1-207ENST00000466624 ADAM32Q8TC27 787 aa16.65■□□□□ 0.26
GPC1-207ENST00000466624 OSCP1Q8WVF1 389 aa16.65■□□□□ 0.26
GPC1-207ENST00000466624 RFFLQ8WZ73 363 aa16.65■□□□□ 0.26
GPC1-207ENST00000466624 FCRL2Q96LA5 508 aaPredicted RBP16.65■□□□□ 0.26
GPC1-207ENST00000466624 RPP25Q9BUL9 199 aaKnown RBP16.65■□□□□ 0.26
GPC1-207ENST00000466624 TRMT61BQ9BVS5 477 aaKnown RBP16.65■□□□□ 0.26
GPC1-207ENST00000466624 REXO2Q9Y3B8 237 aaKnown RBP16.65■□□□□ 0.26
GPC1-207ENST00000466624 UNC80Q8N2C7 3258 aa16.64■□□□□ 0.25
GPC1-207ENST00000466624 A0A0A6YYK5 440 aaPredicted RBP16.64■□□□□ 0.25
GPC1-207ENST00000466624 APOEP02649 317 aa16.64■□□□□ 0.25
GPC1-207ENST00000466624 PTMAP06454 111 aaKnown RBP16.64■□□□□ 0.25
GPC1-207ENST00000466624 IRF1P10914 325 aa16.64■□□□□ 0.25
GPC1-207ENST00000466624 CCR1P32246 355 aa16.64■□□□□ 0.25
GPC1-207ENST00000466624 HARS2P49590 506 aaKnown RBP16.64■□□□□ 0.25
GPC1-207ENST00000466624 CXCR3P49682 368 aa16.64■□□□□ 0.25
GPC1-207ENST00000466624 VAV2P52735 878 aa16.64■□□□□ 0.25
GPC1-207ENST00000466624 OGDHQ02218 1023 aa16.64■□□□□ 0.25
GPC1-207ENST00000466624 DEUP1Q05D60 604 aa16.64■□□□□ 0.25
GPC1-207ENST00000466624 TDGQ13569 410 aa16.64■□□□□ 0.25
GPC1-207ENST00000466624 BRMS1LQ5PSV4 323 aa16.64■□□□□ 0.25
GPC1-207ENST00000466624 CC2D1AQ6P1N0 951 aaPredicted RBP16.64■□□□□ 0.25
GPC1-207ENST00000466624 SND1Q7KZF4 910 aaKnown RBP eCLIP16.64■□□□□ 0.253e-6■■■■■ 31
GPC1-207ENST00000466624 YAF2Q8IY57 180 aa16.64■□□□□ 0.25
GPC1-207ENST00000466624 ZNF564Q8TBZ8 553 aaPredicted RBP16.64■□□□□ 0.25
GPC1-207ENST00000466624 RSAD2Q8WXG1 361 aa16.64■□□□□ 0.25
GPC1-207ENST00000466624 NCAPGQ9BPX3 1015 aa16.64■□□□□ 0.25
GPC1-207ENST00000466624 ADAM33Q9BZ11 813 aa16.64■□□□□ 0.25
GPC1-207ENST00000466624 PIGVQ9NUD9 493 aa16.64■□□□□ 0.25
GPC1-207ENST00000466624 CALCOCO1Q9P1Z2 691 aa16.64■□□□□ 0.25
GPC1-207ENST00000466624 CTTNBP2NLQ9P2B4 639 aa16.64■□□□□ 0.25
GPC1-207ENST00000466624 STOML2Q9UJZ1 356 aa16.64■□□□□ 0.25
GPC1-207ENST00000466624 SORCS3Q9UPU3 1222 aa16.64■□□□□ 0.25
GPC1-207ENST00000466624 TICRRQ7Z2Z1 1910 aa16.63■□□□□ 0.25
GPC1-207ENST00000466624 BTNL10A8MVZ5 291 aa16.63■□□□□ 0.25
GPC1-207ENST00000466624 PJA2O43164 708 aa16.63■□□□□ 0.25
GPC1-207ENST00000466624 CCP110O43303 1012 aa16.63■□□□□ 0.25
GPC1-207ENST00000466624 ASGR2P07307 311 aa16.63■□□□□ 0.25
GPC1-207ENST00000466624 HMBSP08397 361 aa16.63■□□□□ 0.25
GPC1-207ENST00000466624 TFE3P19532 575 aaPredicted RBP16.63■□□□□ 0.25
GPC1-207ENST00000466624 PSMA2P25787 234 aa16.63■□□□□ 0.25
GPC1-207ENST00000466624 CORO1AP31146 461 aaKnown RBP16.63■□□□□ 0.25
GPC1-207ENST00000466624 HADHBP55084 474 aaKnown RBP16.63■□□□□ 0.25
GPC1-207ENST00000466624 ATP11AP98196 1134 aa16.63■□□□□ 0.25
GPC1-207ENST00000466624 ZNF252P-AS1Q0IIN9 211 aa16.63■□□□□ 0.25
GPC1-207ENST00000466624 NME3Q13232 169 aa16.63■□□□□ 0.25
GPC1-207ENST00000466624 GRM2Q14416 872 aa16.63■□□□□ 0.25
GPC1-207ENST00000466624 PIGHQ14442 188 aaPredicted RBP16.63■□□□□ 0.25
GPC1-207ENST00000466624 PDGFRLQ15198 375 aa16.63■□□□□ 0.25
GPC1-207ENST00000466624 C15orf59Q2T9L4 293 aaPredicted RBP16.63■□□□□ 0.25
GPC1-207ENST00000466624 RNF135Q8IUD6 432 aa16.63■□□□□ 0.25
GPC1-207ENST00000466624 FAM217AQ8IXS0 508 aa16.63■□□□□ 0.25
GPC1-207ENST00000466624 NIPA2Q8N8Q9 360 aa16.63■□□□□ 0.25
GPC1-207ENST00000466624 ACRBPQ8NEB7 543 aa16.63■□□□□ 0.25
GPC1-207ENST00000466624 SLC35G2Q8TBE7 412 aa16.63■□□□□ 0.25
GPC1-207ENST00000466624 FAM172AQ8WUF8 416 aa16.63■□□□□ 0.25
GPC1-207ENST00000466624 IRF7Q92985 503 aa16.63■□□□□ 0.25
GPC1-207ENST00000466624 WBP2Q969T9 261 aa16.63■□□□□ 0.25
GPC1-207ENST00000466624 CALR3Q96L12 384 aaKnown RBP16.63■□□□□ 0.25
GPC1-207ENST00000466624 FAM83CQ9BQN1 747 aa16.63■□□□□ 0.25
GPC1-207ENST00000466624 IRX2Q9BZI1 471 aaPredicted RBP16.63■□□□□ 0.25
GPC1-207ENST00000466624 TRPV5Q9NQA5 729 aa16.63■□□□□ 0.25
GPC1-207ENST00000466624 IP6K2Q9UHH9 426 aa16.63■□□□□ 0.25
GPC1-207ENST00000466624 ANAPC7Q9UJX3 599 aa16.63■□□□□ 0.25
GPC1-207ENST00000466624 KCNU1A8MYU2 1149 aa16.62■□□□□ 0.25
GPC1-207ENST00000466624 MYO1FO00160 1098 aa16.62■□□□□ 0.25
GPC1-207ENST00000466624 SLC34A2O95436 690 aa16.62■□□□□ 0.25
GPC1-207ENST00000466624 KLKB1P03952 638 aa16.62■□□□□ 0.25
GPC1-207ENST00000466624 IFNAR2P48551 515 aa16.62■□□□□ 0.25
GPC1-207ENST00000466624 SLC11A2P49281 568 aa16.62■□□□□ 0.25
GPC1-207ENST00000466624 HDAC4P56524 1084 aa16.62■□□□□ 0.25
GPC1-207ENST00000466624 CDO1Q16878 200 aa16.62■□□□□ 0.25
GPC1-207ENST00000466624 ZC3H12AQ5D1E8 599 aaKnown RBP16.62■□□□□ 0.25
GPC1-207ENST00000466624 ACBD5Q5T8D3 534 aaPredicted RBP16.62■□□□□ 0.25
GPC1-207ENST00000466624 CPXM2Q8N436 756 aa16.62■□□□□ 0.25
GPC1-207ENST00000466624 ATP6V0D2Q8N8Y2 350 aa16.62■□□□□ 0.25
GPC1-207ENST00000466624 ST13P5Q8NFI4 369 aaPredicted RBP16.62■□□□□ 0.25
GPC1-207ENST00000466624 DNASE1L2Q92874 299 aa16.62■□□□□ 0.25
GPC1-207ENST00000466624 BTN2A3PQ96KV6 586 aa16.62■□□□□ 0.25
GPC1-207ENST00000466624 TRIM7Q9C029 511 aa16.62■□□□□ 0.25
GPC1-207ENST00000466624 WDCPQ9H6R7 721 aa16.62■□□□□ 0.25
GPC1-207ENST00000466624 SLC2A4RGQ9NR83 387 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms