RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 C11orf44Q8N8P7 122 aa4.98□□□□□ -1.61
LRCH3-211ENST00000466054 WDYHV1Q96HA8 205 aa4.98□□□□□ -1.61
LRCH3-211ENST00000466054 RMDN3Q96TC7 470 aa4.98□□□□□ -1.61
LRCH3-211ENST00000466054 PRPF18Q99633 342 aaKnown RBP4.98□□□□□ -1.61
LRCH3-211ENST00000466054 THAP7Q9BT49 309 aaPredicted RBP4.98□□□□□ -1.61
LRCH3-211ENST00000466054 QTRT1Q9BXR0 403 aaKnown RBP4.98□□□□□ -1.61
LRCH3-211ENST00000466054 VPS16Q9H269 839 aa4.98□□□□□ -1.61
LRCH3-211ENST00000466054 SNX15Q9NRS6 342 aa4.98□□□□□ -1.61
LRCH3-211ENST00000466054 hCG_1642624A0A1W2PR95 340 aa4.97□□□□□ -1.61
LRCH3-211ENST00000466054 LGALS16A8MUM7 142 aa4.97□□□□□ -1.61
LRCH3-211ENST00000466054 AP4M1O00189 453 aa4.97□□□□□ -1.61
LRCH3-211ENST00000466054 CES2O00748 559 aa4.97□□□□□ -1.61
LRCH3-211ENST00000466054 SPRY2O43597 315 aa4.97□□□□□ -1.61
LRCH3-211ENST00000466054 TOP3BO95985 862 aaKnown RBP4.97□□□□□ -1.61
LRCH3-211ENST00000466054 SRGAP2BP0DMP2 458 aa4.97□□□□□ -1.61
LRCH3-211ENST00000466054 ADRA1DP25100 572 aa4.97□□□□□ -1.61
LRCH3-211ENST00000466054 SERPINF1P36955 418 aa4.97□□□□□ -1.61
LRCH3-211ENST00000466054 TRAPPC10P48553 1259 aa4.97□□□□□ -1.61
LRCH3-211ENST00000466054 GALNT1Q10472 559 aaPredicted RBP4.97□□□□□ -1.61
LRCH3-211ENST00000466054 FOXO1Q12778 655 aa4.97□□□□□ -1.61
LRCH3-211ENST00000466054 MTAPQ13126 283 aa4.97□□□□□ -1.61
LRCH3-211ENST00000466054 TRIM14Q14142 442 aa4.97□□□□□ -1.61
LRCH3-211ENST00000466054 RABEP1Q15276 862 aa4.97□□□□□ -1.61
LRCH3-211ENST00000466054 ELF2Q15723 593 aa4.97□□□□□ -1.61
LRCH3-211ENST00000466054 CCDC38Q502W7 563 aa4.97□□□□□ -1.61
LRCH3-211ENST00000466054 PCID2Q5JVF3 399 aa4.97□□□□□ -1.61
LRCH3-211ENST00000466054 ERAP2Q6P179 960 aa4.97□□□□□ -1.61
LRCH3-211ENST00000466054 CEP85Q6P2H3 762 aa4.97□□□□□ -1.61
LRCH3-211ENST00000466054 ZNF66Q6ZN08 573 aa4.97□□□□□ -1.61
LRCH3-211ENST00000466054 DPY19L3Q6ZPD9 716 aa4.97□□□□□ -1.61
LRCH3-211ENST00000466054 CNGA4Q8IV77 575 aa4.97□□□□□ -1.61
LRCH3-211ENST00000466054 SMC5Q8IY18 1101 aa4.97□□□□□ -1.61
LRCH3-211ENST00000466054 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.97□□□□□ -1.61
LRCH3-211ENST00000466054 OVCA2Q8WZ82 227 aa4.97□□□□□ -1.61
LRCH3-211ENST00000466054 RSC1A1Q92681 617 aa4.97□□□□□ -1.61
LRCH3-211ENST00000466054 LTV1Q96GA3 475 aaPredicted RBP4.97□□□□□ -1.61
LRCH3-211ENST00000466054 LENG8Q96PV6 779 aaPredicted RBP4.97□□□□□ -1.61
LRCH3-211ENST00000466054 SPRTNQ9H040 489 aaPredicted RBP4.97□□□□□ -1.61
LRCH3-211ENST00000466054 PTPRHQ9HD43 1115 aa4.97□□□□□ -1.61
LRCH3-211ENST00000466054 MGAT4CQ9UBM8 478 aa4.97□□□□□ -1.61
LRCH3-211ENST00000466054 AQP12BA6NM10 295 aa4.96□□□□□ -1.62
LRCH3-211ENST00000466054 KCNU1A8MYU2 1149 aa4.96□□□□□ -1.62
LRCH3-211ENST00000466054 PCDH17O14917 1159 aa4.96□□□□□ -1.62
LRCH3-211ENST00000466054 DHHO43323 396 aa4.96□□□□□ -1.62
LRCH3-211ENST00000466054 LATS1O95835 1130 aa4.96□□□□□ -1.62
LRCH3-211ENST00000466054 FGAP02671 866 aa4.96□□□□□ -1.62
LRCH3-211ENST00000466054 ANXA6P08133 673 aa4.96□□□□□ -1.62
LRCH3-211ENST00000466054 ALDH18A1P54886 795 aaKnown RBP4.96□□□□□ -1.62
LRCH3-211ENST00000466054 CSHL1Q14406 222 aa4.96□□□□□ -1.62
LRCH3-211ENST00000466054 KCNJ12Q14500 433 aa4.96□□□□□ -1.62
LRCH3-211ENST00000466054 GGT6Q6P531 493 aa4.96□□□□□ -1.62
LRCH3-211ENST00000466054 SLC29A4Q7RTT9 530 aa4.96□□□□□ -1.62
LRCH3-211ENST00000466054 NRSN1Q8IZ57 195 aa4.96□□□□□ -1.62
LRCH3-211ENST00000466054 CACNA2D3Q8IZS8 1091 aa4.96□□□□□ -1.62
LRCH3-211ENST00000466054 PNPLA1Q8N8W4 532 aa4.96□□□□□ -1.62
LRCH3-211ENST00000466054 ZBTB8BQ8NAP8 495 aaPredicted RBP4.96□□□□□ -1.62
LRCH3-211ENST00000466054 TP63Q9H3D4 680 aaPredicted RBP4.96□□□□□ -1.62
LRCH3-211ENST00000466054 AGO4Q9HCK5 861 aaKnown RBP4.96□□□□□ -1.62
LRCH3-211ENST00000466054 DACT1Q9NYF0 836 aa4.96□□□□□ -1.62
LRCH3-211ENST00000466054 SH3BP4Q9P0V3 963 aa4.96□□□□□ -1.62
LRCH3-211ENST00000466054 PNMA6EA0A0J9YXQ4 647 aa4.95□□□□□ -1.62
LRCH3-211ENST00000466054 PLEKHD1A6NEE1 506 aa4.95□□□□□ -1.62
LRCH3-211ENST00000466054 JTBO76095 146 aa4.95□□□□□ -1.62
LRCH3-211ENST00000466054 ITGA2BP08514 1039 aa4.95□□□□□ -1.62
LRCH3-211ENST00000466054 SCP2P22307 547 aa4.95□□□□□ -1.62
LRCH3-211ENST00000466054 MCM5P33992 734 aa4.95□□□□□ -1.62
LRCH3-211ENST00000466054 PBX1P40424 430 aa4.95□□□□□ -1.62
LRCH3-211ENST00000466054 TUBB8Q3ZCM7 444 aa4.95□□□□□ -1.62
LRCH3-211ENST00000466054 AASDHQ4L235 1098 aaPredicted RBP4.95□□□□□ -1.62
LRCH3-211ENST00000466054 L1TD1Q5T7N2 865 aaKnown RBP4.95□□□□□ -1.62
LRCH3-211ENST00000466054 CCDC174Q6PII3 467 aa4.95□□□□□ -1.62
LRCH3-211ENST00000466054 CLASRPQ8N2M8 674 aaKnown RBP4.95□□□□□ -1.62
LRCH3-211ENST00000466054 ATG16L2Q8NAA4 619 aa4.95□□□□□ -1.62
LRCH3-211ENST00000466054 STYXQ8WUJ0 223 aa4.95□□□□□ -1.62
LRCH3-211ENST00000466054 NSMCE1Q8WV22 266 aa4.95□□□□□ -1.62
LRCH3-211ENST00000466054 WDR60Q8WVS4 1066 aa4.95□□□□□ -1.62
LRCH3-211ENST00000466054 HERPUD2Q9BSE4 406 aa4.95□□□□□ -1.62
LRCH3-211ENST00000466054 KATNAL1Q9BW62 490 aa4.95□□□□□ -1.62
LRCH3-211ENST00000466054 HERC5Q9UII4 1024 aaKnown RBP4.95□□□□□ -1.62
LRCH3-211ENST00000466054 NFU1Q9UMS0 254 aa4.95□□□□□ -1.62
LRCH3-211ENST00000466054 RIPOR2Q9Y4F9 1068 aa4.95□□□□□ -1.62
LRCH3-211ENST00000466054 ARID4BQ4LE39 1312 aaPredicted RBP4.95□□□□□ -1.62
LRCH3-211ENST00000466054 J3KTA2 159 aa4.94□□□□□ -1.62
LRCH3-211ENST00000466054 ACKR2O00590 384 aa4.94□□□□□ -1.62
LRCH3-211ENST00000466054 ZNF213O14771 459 aa4.94□□□□□ -1.62
LRCH3-211ENST00000466054 ASNA1O43681 348 aa4.94□□□□□ -1.62
LRCH3-211ENST00000466054 TUBB4AP04350 444 aa4.94□□□□□ -1.62
LRCH3-211ENST00000466054 MMP8P22894 467 aa4.94□□□□□ -1.62
LRCH3-211ENST00000466054 CHKAP35790 457 aa4.94□□□□□ -1.62
LRCH3-211ENST00000466054 GRK6P43250 576 aa4.94□□□□□ -1.62
LRCH3-211ENST00000466054 GSTM5P46439 218 aa4.94□□□□□ -1.62
LRCH3-211ENST00000466054 DIO1P49895 249 aa4.94□□□□□ -1.62
LRCH3-211ENST00000466054 TXNL4AP83876 142 aaKnown RBP4.94□□□□□ -1.62
LRCH3-211ENST00000466054 PSG6Q00889 435 aa4.94□□□□□ -1.62
LRCH3-211ENST00000466054 LMAN2Q12907 356 aa4.94□□□□□ -1.62
LRCH3-211ENST00000466054 DNASE1L3Q13609 305 aa4.94□□□□□ -1.62
LRCH3-211ENST00000466054 C4orf46Q504U0 113 aa4.94□□□□□ -1.62
LRCH3-211ENST00000466054 TMEM196Q5HYL7 178 aa4.94□□□□□ -1.62
LRCH3-211ENST00000466054 CEP78Q5JTW2 689 aa4.94□□□□□ -1.62
LRCH3-211ENST00000466054 GORABQ5T7V8 394 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms