RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 DDX3XO00571 662 aaKnown RBP eCLIP12.89□□□□□ -0.35
CHPF2-202ENST00000465601 TRDMT1O14717 391 aaKnown RBP12.89□□□□□ -0.35
CHPF2-202ENST00000465601 DAB1O75553 588 aa12.89□□□□□ -0.35
CHPF2-202ENST00000465601 GJB6O95452 261 aa12.89□□□□□ -0.35
CHPF2-202ENST00000465601 IGLV3-27P01718 113 aa12.89□□□□□ -0.35
CHPF2-202ENST00000465601 ADH5P11766 374 aa12.89□□□□□ -0.35
CHPF2-202ENST00000465601 NOS2P35228 1153 aa12.89□□□□□ -0.35
CHPF2-202ENST00000465601 SCNN1AP37088 669 aa12.89□□□□□ -0.35
CHPF2-202ENST00000465601 OPRD1P41143 372 aa12.89□□□□□ -0.35
CHPF2-202ENST00000465601 SLC6A11P48066 632 aa12.89□□□□□ -0.35
CHPF2-202ENST00000465601 GAD2Q05329 585 aa12.89□□□□□ -0.35
CHPF2-202ENST00000465601 FZD5Q13467 585 aa12.89□□□□□ -0.35
CHPF2-202ENST00000465601 ANO4Q32M45 955 aa12.89□□□□□ -0.35
CHPF2-202ENST00000465601 TDRD12Q587J7 1177 aaKnown RBP12.89□□□□□ -0.35
CHPF2-202ENST00000465601 ZC3H12AQ5D1E8 599 aaKnown RBP12.89□□□□□ -0.35
CHPF2-202ENST00000465601 HGSNATQ68CP4 663 aa12.89□□□□□ -0.35
CHPF2-202ENST00000465601 C1orf228Q6PIY5 440 aa12.89□□□□□ -0.35
CHPF2-202ENST00000465601 DNAAF5Q86Y56 855 aa12.89□□□□□ -0.35
CHPF2-202ENST00000465601 UNC45BQ8IWX7 931 aa12.89□□□□□ -0.35
CHPF2-202ENST00000465601 CCDC105Q8IYK2 499 aa12.89□□□□□ -0.35
CHPF2-202ENST00000465601 NAT16Q8N8M0 369 aa12.89□□□□□ -0.35
CHPF2-202ENST00000465601 BHMTQ93088 406 aa12.89□□□□□ -0.35
CHPF2-202ENST00000465601 SLC39A13Q96H72 371 aa12.89□□□□□ -0.35
CHPF2-202ENST00000465601 FCRL2Q96LA5 508 aaPredicted RBP12.89□□□□□ -0.35
CHPF2-202ENST00000465601 P2RY13Q9BPV8 354 aa12.89□□□□□ -0.35
CHPF2-202ENST00000465601 OSBPL6Q9BZF3 934 aa12.89□□□□□ -0.35
CHPF2-202ENST00000465601 FAM204AQ9H8W3 233 aa12.89□□□□□ -0.35
CHPF2-202ENST00000465601 METTL5Q9NRN9 209 aaKnown RBP12.89□□□□□ -0.35
CHPF2-202ENST00000465601 RBM12Q9NTZ6 932 aaKnown RBP12.89□□□□□ -0.35
CHPF2-202ENST00000465601 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.89□□□□□ -0.35
CHPF2-202ENST00000465601 COX16Q9P0S2 106 aa12.89□□□□□ -0.35
CHPF2-202ENST00000465601 TMEM59LQ9UK28 342 aa12.89□□□□□ -0.35
CHPF2-202ENST00000465601 TLR6Q9Y2C9 796 aa12.89□□□□□ -0.35
CHPF2-202ENST00000465601 GOLGA6L7A0A1B0GV03 622 aa12.88□□□□□ -0.35
CHPF2-202ENST00000465601 NCAM2O15394 837 aa12.88□□□□□ -0.35
CHPF2-202ENST00000465601 IRAK2O43187 625 aa12.88□□□□□ -0.35
CHPF2-202ENST00000465601 TSPAN3O60637 253 aa12.88□□□□□ -0.35
CHPF2-202ENST00000465601 IGLV3-25P01717 112 aa12.88□□□□□ -0.35
CHPF2-202ENST00000465601 SERPING1P05155 500 aa12.88□□□□□ -0.35
CHPF2-202ENST00000465601 CALB1P05937 261 aa12.88□□□□□ -0.35
CHPF2-202ENST00000465601 PLEKP08567 350 aaPredicted RBP12.88□□□□□ -0.35
CHPF2-202ENST00000465601 CHRNB1P11230 501 aa12.88□□□□□ -0.35
CHPF2-202ENST00000465601 TFE3P19532 575 aaPredicted RBP12.88□□□□□ -0.35
CHPF2-202ENST00000465601 GBP1P32455 592 aa12.88□□□□□ -0.35
CHPF2-202ENST00000465601 CHKAP35790 457 aa12.88□□□□□ -0.35
CHPF2-202ENST00000465601 FLT3P36888 993 aa12.88□□□□□ -0.35
CHPF2-202ENST00000465601 MATKP42679 507 aa12.88□□□□□ -0.35
CHPF2-202ENST00000465601 RING1Q06587 406 aa12.88□□□□□ -0.35
CHPF2-202ENST00000465601 TRIM14Q14142 442 aa12.88□□□□□ -0.35
CHPF2-202ENST00000465601 NUGGCQ68CJ6 796 aa12.88□□□□□ -0.35
CHPF2-202ENST00000465601 FSTL4Q6MZW2 842 aa12.88□□□□□ -0.35
CHPF2-202ENST00000465601 TRNP1Q6NT89 227 aa12.88□□□□□ -0.35
CHPF2-202ENST00000465601 MON1BQ7L1V2 547 aa12.88□□□□□ -0.35
CHPF2-202ENST00000465601 TMC6Q7Z403 805 aa12.88□□□□□ -0.35
CHPF2-202ENST00000465601 C12orf40Q86WS4 652 aa12.88□□□□□ -0.35
CHPF2-202ENST00000465601 MCOLN2Q8IZK6 566 aa12.88□□□□□ -0.35
CHPF2-202ENST00000465601 OR8K1Q8NGG5 319 aa12.88□□□□□ -0.35
CHPF2-202ENST00000465601 CD101Q93033 1021 aa12.88□□□□□ -0.35
CHPF2-202ENST00000465601 CLDN23Q96B33 292 aa12.88□□□□□ -0.35
CHPF2-202ENST00000465601 P2RY11Q96G91 374 aa12.88□□□□□ -0.35
CHPF2-202ENST00000465601 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.88□□□□□ -0.35
CHPF2-202ENST00000465601 BBS2Q9BXC9 721 aa12.88□□□□□ -0.35
CHPF2-202ENST00000465601 DDIT4Q9NX09 232 aa12.88□□□□□ -0.35
CHPF2-202ENST00000465601 PLK2Q9NYY3 685 aa12.88□□□□□ -0.35
CHPF2-202ENST00000465601 DLGAP2Q9P1A6 1054 aa12.88□□□□□ -0.35
CHPF2-202ENST00000465601 WDR35Q9P2L0 1181 aa12.88□□□□□ -0.35
CHPF2-202ENST00000465601 BZW2Q9Y6E2 419 aaKnown RBP12.88□□□□□ -0.35
CHPF2-202ENST00000465601 NEDD8-MDP1E9PL57 170 aa12.87□□□□□ -0.35
CHPF2-202ENST00000465601 M0QYT0 321 aa12.87□□□□□ -0.35
CHPF2-202ENST00000465601 HOXC11O43248 304 aaPredicted RBP12.87□□□□□ -0.35
CHPF2-202ENST00000465601 ACSL4O60488 711 aa12.87□□□□□ -0.35
CHPF2-202ENST00000465601 MOCS2O96007 188 aaPredicted RBP12.87□□□□□ -0.35
CHPF2-202ENST00000465601 EGFP01133 1207 aa12.87□□□□□ -0.35
CHPF2-202ENST00000465601 FTLP02792 175 aaPredicted RBP12.87□□□□□ -0.35
CHPF2-202ENST00000465601 TPM1P09493 284 aa12.87□□□□□ -0.35
CHPF2-202ENST00000465601 GZMAP12544 262 aa12.87□□□□□ -0.35
CHPF2-202ENST00000465601 TYRP14679 529 aa12.87□□□□□ -0.35
CHPF2-202ENST00000465601 SLC11A2P49281 568 aa12.87□□□□□ -0.35
CHPF2-202ENST00000465601 SULT1E1P49888 294 aa12.87□□□□□ -0.35
CHPF2-202ENST00000465601 ZNF75DP51815 510 aa12.87□□□□□ -0.35
CHPF2-202ENST00000465601 ADKP55263 362 aaKnown RBP12.87□□□□□ -0.35
CHPF2-202ENST00000465601 C1QBPQ07021 282 aaKnown RBP12.87□□□□□ -0.35
CHPF2-202ENST00000465601 GRSF1Q12849 480 aaKnown RBP eCLIP12.87□□□□□ -0.35
CHPF2-202ENST00000465601 NME3Q13232 169 aa12.87□□□□□ -0.35
CHPF2-202ENST00000465601 NNTQ13423 1086 aa12.87□□□□□ -0.35
CHPF2-202ENST00000465601 EIF4EBP2Q13542 120 aaPredicted RBP12.87□□□□□ -0.35
CHPF2-202ENST00000465601 TMEM196Q5HYL7 178 aa12.87□□□□□ -0.35
CHPF2-202ENST00000465601 ADGRF1Q5T601 910 aa12.87□□□□□ -0.35
CHPF2-202ENST00000465601 CPXM2Q8N436 756 aa12.87□□□□□ -0.35
CHPF2-202ENST00000465601 EMC1Q8N766 993 aa12.87□□□□□ -0.35
CHPF2-202ENST00000465601 JOSD2Q8TAC2 188 aa12.87□□□□□ -0.35
CHPF2-202ENST00000465601 RXFP2Q8WXD0 754 aa12.87□□□□□ -0.35
CHPF2-202ENST00000465601 RNF34Q969K3 372 aa12.87□□□□□ -0.35
CHPF2-202ENST00000465601 TBCBQ99426 244 aa12.87□□□□□ -0.35
CHPF2-202ENST00000465601 NPY6RQ99463 290 aa12.87□□□□□ -0.35
CHPF2-202ENST00000465601 SELENOOQ9BVL4 669 aa12.87□□□□□ -0.35
CHPF2-202ENST00000465601 ADAM33Q9BZ11 813 aa12.87□□□□□ -0.35
CHPF2-202ENST00000465601 MARK1Q9P0L2 795 aa12.87□□□□□ -0.35
CHPF2-202ENST00000465601 CALCOCO1Q9P1Z2 691 aa12.87□□□□□ -0.35
CHPF2-202ENST00000465601 ADAMTS1Q9UHI8 967 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms