RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 ARRDC1-AS1Q9H2J1 176 aa22.74■■□□□ 1.23
LIME1-203ENST00000465591 SAMSN1Q9NSI8 373 aaKnown RBP22.74■■□□□ 1.23
LIME1-203ENST00000465591 GFRA2O00451 464 aa22.73■■□□□ 1.23
LIME1-203ENST00000465591 LRP3O75074 770 aa22.73■■□□□ 1.23
LIME1-203ENST00000465591 EPN2O95208 641 aa22.73■■□□□ 1.23
LIME1-203ENST00000465591 PNMA6AP0CW24 399 aaPredicted RBP22.73■■□□□ 1.23
LIME1-203ENST00000465591 USP8P40818 1118 aa22.73■■□□□ 1.23
LIME1-203ENST00000465591 GEN1Q17RS7 908 aa22.73■■□□□ 1.23
LIME1-203ENST00000465591 FRMD1Q8N878 549 aa22.73■■□□□ 1.23
LIME1-203ENST00000465591 KCNV2Q8TDN2 545 aa22.73■■□□□ 1.23
LIME1-203ENST00000465591 RLN3Q8WXF3 142 aa22.73■■□□□ 1.23
LIME1-203ENST00000465591 ERLEC1Q96DZ1 483 aa22.73■■□□□ 1.23
LIME1-203ENST00000465591 SLC4A5Q9BY07 1137 aa22.73■■□□□ 1.23
LIME1-203ENST00000465591 NDST4Q9H3R1 872 aa22.73■■□□□ 1.23
LIME1-203ENST00000465591 CD248Q9HCU0 757 aa22.73■■□□□ 1.23
LIME1-203ENST00000465591 ST7Q9NRC1 585 aa22.73■■□□□ 1.23
LIME1-203ENST00000465591 DLL3Q9NYJ7 618 aa22.73■■□□□ 1.23
LIME1-203ENST00000465591 TJP2Q9UDY2 1190 aa22.73■■□□□ 1.23
LIME1-203ENST00000465591 A0A1W2PQF6 199 aa22.72■■□□□ 1.23
LIME1-203ENST00000465591 TCRBV21S2A2A0A5A6 115 aa22.72■■□□□ 1.23
LIME1-203ENST00000465591 FBXO21O94952 628 aa22.72■■□□□ 1.23
LIME1-203ENST00000465591 IGLV3-27P01718 113 aa22.72■■□□□ 1.23
LIME1-203ENST00000465591 NTSR1P30989 418 aa22.72■■□□□ 1.23
LIME1-203ENST00000465591 CSRP2Q16527 193 aa22.72■■□□□ 1.23
LIME1-203ENST00000465591 VWA3BQ502W6 1294 aa22.72■■□□□ 1.23
LIME1-203ENST00000465591 PRR23CQ6ZRP0 262 aa22.72■■□□□ 1.23
LIME1-203ENST00000465591 HMGB4Q8WW32 186 aa22.72■■□□□ 1.23
LIME1-203ENST00000465591 LOXL4Q96JB6 756 aa22.72■■□□□ 1.23
LIME1-203ENST00000465591 TUBGCP2Q9BSJ2 902 aa22.72■■□□□ 1.23
LIME1-203ENST00000465591 SMOC1Q9H4F8 434 aa22.72■■□□□ 1.23
LIME1-203ENST00000465591 POLMQ9NP87 494 aaPredicted RBP22.72■■□□□ 1.23
LIME1-203ENST00000465591 DACH1Q9UI36 760 aa22.72■■□□□ 1.23
LIME1-203ENST00000465591 STOML2Q9UJZ1 356 aa22.72■■□□□ 1.23
LIME1-203ENST00000465591 SLC27A6Q9Y2P4 619 aa22.72■■□□□ 1.23
LIME1-203ENST00000465591 E5RJQ4 531 aa22.71■■□□□ 1.23
LIME1-203ENST00000465591 PAPSS1O43252 624 aaPredicted RBP22.71■■□□□ 1.23
LIME1-203ENST00000465591 TSPAN3O60637 253 aa22.71■■□□□ 1.23
LIME1-203ENST00000465591 PRKCSHP14314 528 aaPredicted RBP22.71■■□□□ 1.23
LIME1-203ENST00000465591 HOXB2P14652 356 aa22.71■■□□□ 1.23
LIME1-203ENST00000465591 HARS2P49590 506 aaKnown RBP22.71■■□□□ 1.23
LIME1-203ENST00000465591 LMNB2Q03252 620 aa22.71■■□□□ 1.23
LIME1-203ENST00000465591 KCNMA1Q12791 1236 aa22.71■■□□□ 1.23
LIME1-203ENST00000465591 MEA1Q16626 185 aa22.71■■□□□ 1.23
LIME1-203ENST00000465591 USP39Q53GS9 565 aaKnown RBP22.71■■□□□ 1.23
LIME1-203ENST00000465591 KIAA1211LQ6NV74 962 aa22.71■■□□□ 1.23
LIME1-203ENST00000465591 RBM43Q6ZSC3 357 aaKnown RBP22.71■■□□□ 1.23
LIME1-203ENST00000465591 NUDT18Q6ZVK8 323 aa22.71■■□□□ 1.23
LIME1-203ENST00000465591 FAM114A1Q8IWE2 563 aa22.71■■□□□ 1.23
LIME1-203ENST00000465591 WDTC1Q8N5D0 677 aa22.71■■□□□ 1.23
LIME1-203ENST00000465591 PIWIL1Q96J94 861 aaKnown RBP22.71■■□□□ 1.23
LIME1-203ENST00000465591 FAM81BQ96LP2 452 aa22.71■■□□□ 1.23
LIME1-203ENST00000465591 CACNA2D2Q9NY47 1150 aa22.71■■□□□ 1.23
LIME1-203ENST00000465591 DNAJC12Q9UKB3 198 aa22.71■■□□□ 1.23
LIME1-203ENST00000465591 NAALADL1Q9UQQ1 740 aa22.71■■□□□ 1.23
LIME1-203ENST00000465591 KCNJ18B7U540 433 aa22.7■■□□□ 1.22
LIME1-203ENST00000465591 WASH3PC4AMC7 463 aa22.7■■□□□ 1.22
LIME1-203ENST00000465591 MED7O43513 233 aa22.7■■□□□ 1.22
LIME1-203ENST00000465591 GDF9O60383 454 aa22.7■■□□□ 1.22
LIME1-203ENST00000465591 ALDH1A2O94788 518 aa22.7■■□□□ 1.22
LIME1-203ENST00000465591 GABRG2P18507 467 aa22.7■■□□□ 1.22
LIME1-203ENST00000465591 HOXD9P28356 352 aaPredicted RBP22.7■■□□□ 1.22
LIME1-203ENST00000465591 GBP1P32455 592 aa22.7■■□□□ 1.22
LIME1-203ENST00000465591 SGSHP51688 502 aa22.7■■□□□ 1.22
LIME1-203ENST00000465591 KCNJ12Q14500 433 aa22.7■■□□□ 1.22
LIME1-203ENST00000465591 SF3A2Q15428 464 aaKnown RBP22.7■■□□□ 1.22
LIME1-203ENST00000465591 TRMT11Q7Z4G4 463 aaKnown RBP22.7■■□□□ 1.22
LIME1-203ENST00000465591 CHPFQ8IZ52 775 aa22.7■■□□□ 1.22
LIME1-203ENST00000465591 DQX1Q8TE96 717 aaKnown RBP22.7■■□□□ 1.22
LIME1-203ENST00000465591 DDI1Q8WTU0 396 aa22.7■■□□□ 1.22
LIME1-203ENST00000465591 STK32AQ8WU08 396 aa22.7■■□□□ 1.22
LIME1-203ENST00000465591 RAD54BQ9Y620 910 aa22.7■■□□□ 1.22
LIME1-203ENST00000465591 TNRC6BQ9UPQ9 1833 aaKnown RBP22.7■■□□□ 1.22
LIME1-203ENST00000465591 CEP192Q8TEP8 1941 aa22.7■■□□□ 1.22
LIME1-203ENST00000465591 GOLGA6L7A0A1B0GV03 622 aa22.69■■□□□ 1.22
LIME1-203ENST00000465591 FOXN3O00409 490 aaPredicted RBP22.69■■□□□ 1.22
LIME1-203ENST00000465591 CYBBP04839 570 aa22.69■■□□□ 1.22
LIME1-203ENST00000465591 NCAM1P13591 858 aa22.69■■□□□ 1.22
LIME1-203ENST00000465591 P2RY2P41231 377 aa22.69■■□□□ 1.22
LIME1-203ENST00000465591 ACADSBP45954 432 aa22.69■■□□□ 1.22
LIME1-203ENST00000465591 PDCLQ13371 301 aa22.69■■□□□ 1.22
LIME1-203ENST00000465591 MAP7D1Q3KQU3 841 aa22.69■■□□□ 1.22
LIME1-203ENST00000465591 PLA2G2CQ5R387 149 aa22.69■■□□□ 1.22
LIME1-203ENST00000465591 SYPL2Q5VXT5 272 aa22.69■■□□□ 1.22
LIME1-203ENST00000465591 PMS2CLQ68D20 193 aa22.69■■□□□ 1.22
LIME1-203ENST00000465591 TMEM110Q86TL2 294 aa22.69■■□□□ 1.22
LIME1-203ENST00000465591 PASD1Q8IV76 773 aa22.69■■□□□ 1.22
LIME1-203ENST00000465591 ADAM32Q8TC27 787 aa22.69■■□□□ 1.22
LIME1-203ENST00000465591 FAM149B1Q96BN6 582 aa22.69■■□□□ 1.22
LIME1-203ENST00000465591 GBP4Q96PP9 640 aa22.69■■□□□ 1.22
LIME1-203ENST00000465591 GABRG3Q99928 467 aa22.69■■□□□ 1.22
LIME1-203ENST00000465591 RXFP3Q9NSD7 469 aa22.69■■□□□ 1.22
LIME1-203ENST00000465591 BCCIPQ9P287 314 aaKnown RBP eCLIP22.69■■□□□ 1.22
LIME1-203ENST00000465591 MBD1Q9UIS9 605 aaPredicted RBP22.69■■□□□ 1.22
LIME1-203ENST00000465591 NFE2L3Q9Y4A8 694 aa22.69■■□□□ 1.22
LIME1-203ENST00000465591 PRR5-ARHGAP8B1AHC4 643 aa22.68■■□□□ 1.22
LIME1-203ENST00000465591 LATS1O95835 1130 aa22.68■■□□□ 1.22
LIME1-203ENST00000465591 SLC6A4P31645 630 aa22.68■■□□□ 1.22
LIME1-203ENST00000465591 CLCN1P35523 988 aa22.68■■□□□ 1.22
LIME1-203ENST00000465591 TBX4P57082 545 aa22.68■■□□□ 1.22
LIME1-203ENST00000465591 ARHGAP8P85298 464 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms