RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 NLRP9Q7RTR0 991 aa19.34■□□□□ 0.69
TSPAN4-210ENST00000464987 LIMS2Q7Z4I7 341 aa19.34■□□□□ 0.69
TSPAN4-210ENST00000464987 TP53INP2Q8IXH6 220 aa19.34■□□□□ 0.69
TSPAN4-210ENST00000464987 UNC5BQ8IZJ1 945 aa19.34■□□□□ 0.69
TSPAN4-210ENST00000464987 QKIQ96PU8 341 aaKnown RBP eCLIP19.34■□□□□ 0.69
TSPAN4-210ENST00000464987 GTF2IRD1Q9UHL9 959 aa19.34■□□□□ 0.69
TSPAN4-210ENST00000464987 FZD10Q9ULW2 581 aa19.34■□□□□ 0.69
TSPAN4-210ENST00000464987 L3MBTL1Q9Y468 752 aa19.34■□□□□ 0.69
TSPAN4-210ENST00000464987 NUP205Q92621 2012 aa19.34■□□□□ 0.69
TSPAN4-210ENST00000464987 ZNF487B1APH4 448 aa19.33■□□□□ 0.69
TSPAN4-210ENST00000464987 PTGESO14684 152 aa19.33■□□□□ 0.69
TSPAN4-210ENST00000464987 MFSD11O43934 449 aa19.33■□□□□ 0.69
TSPAN4-210ENST00000464987 HUS1O60921 280 aa19.33■□□□□ 0.69
TSPAN4-210ENST00000464987 PRKCHP24723 683 aa19.33■□□□□ 0.69
TSPAN4-210ENST00000464987 AXLP30530 894 aa19.33■□□□□ 0.69
TSPAN4-210ENST00000464987 MATKP42679 507 aa19.33■□□□□ 0.69
TSPAN4-210ENST00000464987 TTC39BQ5VTQ0 682 aaPredicted RBP19.33■□□□□ 0.69
TSPAN4-210ENST00000464987 HEATR6Q6AI08 1181 aaKnown RBP19.33■□□□□ 0.69
TSPAN4-210ENST00000464987 ZNF449Q6P9G9 518 aa19.33■□□□□ 0.69
TSPAN4-210ENST00000464987 HFE2Q6ZVN8 426 aa19.33■□□□□ 0.69
TSPAN4-210ENST00000464987 HSFY1Q96LI6 401 aa19.33■□□□□ 0.69
TSPAN4-210ENST00000464987 HAS3O00219 553 aa19.33■□□□□ 0.68
TSPAN4-210ENST00000464987 SKIV2L2P42285 1042 aaKnown RBP19.33■□□□□ 0.68
TSPAN4-210ENST00000464987 AFF1P51825 1210 aaKnown RBP19.33■□□□□ 0.68
TSPAN4-210ENST00000464987 CRADDP78560 199 aa19.33■□□□□ 0.68
TSPAN4-210ENST00000464987 TAF1BQ53T94 588 aaPredicted RBP19.33■□□□□ 0.68
TSPAN4-210ENST00000464987 MORN1Q5T089 497 aa19.33■□□□□ 0.68
TSPAN4-210ENST00000464987 SYPL2Q5VXT5 272 aa19.33■□□□□ 0.68
TSPAN4-210ENST00000464987 ARCQ7LC44 396 aa19.33■□□□□ 0.68
TSPAN4-210ENST00000464987 MCUQ8NE86 351 aa19.33■□□□□ 0.68
TSPAN4-210ENST00000464987 AGAP11Q8TF27 550 aa19.33■□□□□ 0.68
TSPAN4-210ENST00000464987 SRPK1Q96SB4 655 aaKnown RBP19.33■□□□□ 0.68
TSPAN4-210ENST00000464987 MECRQ9BV79 373 aa19.33■□□□□ 0.68
TSPAN4-210ENST00000464987 ZNF236Q9UL36 1845 aa19.32■□□□□ 0.68
TSPAN4-210ENST00000464987 HMX2A2RU54 273 aa19.32■□□□□ 0.68
TSPAN4-210ENST00000464987 XPO1O14980 1071 aaKnown RBP19.32■□□□□ 0.68
TSPAN4-210ENST00000464987 DGKIO75912 1065 aa19.32■□□□□ 0.68
TSPAN4-210ENST00000464987 ACADSBP45954 432 aa19.32■□□□□ 0.68
TSPAN4-210ENST00000464987 MRPS5P82675 430 aaKnown RBP19.32■□□□□ 0.68
TSPAN4-210ENST00000464987 RIPK1Q13546 671 aa19.32■□□□□ 0.68
TSPAN4-210ENST00000464987 SV2CQ496J9 727 aa19.32■□□□□ 0.68
TSPAN4-210ENST00000464987 WSCD1Q658N2 575 aa19.32■□□□□ 0.68
TSPAN4-210ENST00000464987 STRADAQ7RTN6 431 aa19.32■□□□□ 0.68
TSPAN4-210ENST00000464987 CTU1Q7Z7A3 348 aaKnown RBP19.32■□□□□ 0.68
TSPAN4-210ENST00000464987 MTDHQ86UE4 582 aaKnown RBP19.32■□□□□ 0.68
TSPAN4-210ENST00000464987 RNF169Q8NCN4 708 aa19.32■□□□□ 0.68
TSPAN4-210ENST00000464987 OLFM3Q96PB7 478 aa19.32■□□□□ 0.68
TSPAN4-210ENST00000464987 NCAPGQ9BPX3 1015 aa19.32■□□□□ 0.68
TSPAN4-210ENST00000464987 TSSK1BQ9BXA7 367 aa19.32■□□□□ 0.68
TSPAN4-210ENST00000464987 DUSP16Q9BY84 665 aa19.32■□□□□ 0.68
TSPAN4-210ENST00000464987 FRMD8Q9BZ67 464 aaPredicted RBP19.32■□□□□ 0.68
TSPAN4-210ENST00000464987 ARHGEF4Q9NR80 690 aa19.32■□□□□ 0.68
TSPAN4-210ENST00000464987 SLC17A6Q9P2U8 582 aa19.32■□□□□ 0.68
TSPAN4-210ENST00000464987 TRPM7Q96QT4 1865 aa19.32■□□□□ 0.68
TSPAN4-210ENST00000464987 SHROOM3Q8TF72 1996 aa19.32■□□□□ 0.68
TSPAN4-210ENST00000464987 C2orf71A6NGG8 1288 aa19.32■□□□□ 0.68
TSPAN4-210ENST00000464987 C2CD2LO14523 706 aa19.32■□□□□ 0.68
TSPAN4-210ENST00000464987 RFPL1O75677 317 aa19.32■□□□□ 0.68
TSPAN4-210ENST00000464987 DCTN3O75935 186 aa19.32■□□□□ 0.68
TSPAN4-210ENST00000464987 TOP3BO95985 862 aaKnown RBP19.32■□□□□ 0.68
TSPAN4-210ENST00000464987 SCNN1AP37088 669 aa19.32■□□□□ 0.68
TSPAN4-210ENST00000464987 NR2C2P49116 596 aa19.32■□□□□ 0.68
TSPAN4-210ENST00000464987 MAP2K5Q13163 448 aa19.32■□□□□ 0.68
TSPAN4-210ENST00000464987 PCBP1Q15365 356 aaKnown RBP eCLIP19.32■□□□□ 0.68
TSPAN4-210ENST00000464987 SLC25A52Q3SY17 297 aa19.32■□□□□ 0.68
TSPAN4-210ENST00000464987 ANKRD20A2Q5SQ80 823 aa19.32■□□□□ 0.68
TSPAN4-210ENST00000464987 ANKRD20A1Q5TYW2 823 aa19.32■□□□□ 0.68
TSPAN4-210ENST00000464987 ANKRD20A3Q5VUR7 823 aa19.32■□□□□ 0.68
TSPAN4-210ENST00000464987 TWF2Q6IBS0 349 aaKnown RBP19.32■□□□□ 0.68
TSPAN4-210ENST00000464987 HTR3CQ8WXA8 447 aa19.32■□□□□ 0.68
TSPAN4-210ENST00000464987 EBNA1BP2Q99848 306 aaKnown RBP19.32■□□□□ 0.68
TSPAN4-210ENST00000464987 SLC13A1Q9BZW2 595 aa19.32■□□□□ 0.68
TSPAN4-210ENST00000464987 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.32■□□□□ 0.68
TSPAN4-210ENST00000464987 A0A0G2JND7 137 aa19.31■□□□□ 0.68
TSPAN4-210ENST00000464987 UNCXA6NJT0 531 aa19.31■□□□□ 0.68
TSPAN4-210ENST00000464987 ZFXP17010 805 aaPredicted RBP19.31■□□□□ 0.68
TSPAN4-210ENST00000464987 TPSB2P20231 275 aa19.31■□□□□ 0.68
TSPAN4-210ENST00000464987 ALDH3A1P30838 453 aa19.31■□□□□ 0.68
TSPAN4-210ENST00000464987 PNPLA4P41247 253 aa19.31■□□□□ 0.68
TSPAN4-210ENST00000464987 TPSAB1Q15661 275 aa19.31■□□□□ 0.68
TSPAN4-210ENST00000464987 SMAD1Q15797 465 aaKnown RBP19.31■□□□□ 0.68
TSPAN4-210ENST00000464987 GPR162Q16538 588 aa19.31■□□□□ 0.68
TSPAN4-210ENST00000464987 EFHC1Q5JVL4 640 aa19.31■□□□□ 0.68
TSPAN4-210ENST00000464987 CLEC20AQ6ZU45 233 aa19.31■□□□□ 0.68
TSPAN4-210ENST00000464987 MAGEC3Q8TD91 643 aa19.31■□□□□ 0.68
TSPAN4-210ENST00000464987 TFB1MQ8WVM0 346 aaKnown RBP19.31■□□□□ 0.68
TSPAN4-210ENST00000464987 SLC7A6OSQ96CW6 309 aaPredicted RBP19.31■□□□□ 0.68
TSPAN4-210ENST00000464987 OXNAD1Q96HP4 312 aaPredicted RBP19.31■□□□□ 0.68
TSPAN4-210ENST00000464987 HNRNPABQ99729 332 aaKnown RBP19.31■□□□□ 0.68
TSPAN4-210ENST00000464987 KCNK13Q9HB14 408 aa19.31■□□□□ 0.68
TSPAN4-210ENST00000464987 TXLNGQ9NUQ3 528 aa19.31■□□□□ 0.68
TSPAN4-210ENST00000464987 CYB561D2O14569 222 aa19.31■□□□□ 0.68
TSPAN4-210ENST00000464987 COPEO14579 308 aa19.31■□□□□ 0.68
TSPAN4-210ENST00000464987 CREB3O43889 395 aa19.31■□□□□ 0.68
TSPAN4-210ENST00000464987 CELF2O95319 508 aaKnown RBP19.31■□□□□ 0.68
TSPAN4-210ENST00000464987 AMHP03971 560 aa19.31■□□□□ 0.68
TSPAN4-210ENST00000464987 SNRPAP09012 282 aaKnown RBP19.31■□□□□ 0.68
TSPAN4-210ENST00000464987 ARL4AP40617 200 aa19.31■□□□□ 0.68
TSPAN4-210ENST00000464987 SERPINB4P48594 390 aa19.31■□□□□ 0.68
TSPAN4-210ENST00000464987 NME3Q13232 169 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms