RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 HSFY1Q96LI6 401 aa27.03■■□□□ 1.92
U2AF1-206ENST00000464750 MED15Q96RN5 788 aa27.03■■□□□ 1.92
U2AF1-206ENST00000464750 CLSTN2Q9H4D0 955 aa27.03■■□□□ 1.92
U2AF1-206ENST00000464750 TNRC6BQ9UPQ9 1833 aaKnown RBP27.03■■□□□ 1.92
U2AF1-206ENST00000464750 BCLAF3A2AJT9 711 aaKnown RBP27.02■■□□□ 1.92
U2AF1-206ENST00000464750 DCDC2BA2VCK2 349 aa27.02■■□□□ 1.92
U2AF1-206ENST00000464750 HARS2P49590 506 aaKnown RBP27.02■■□□□ 1.92
U2AF1-206ENST00000464750 SDE2Q6IQ49 451 aa27.02■■□□□ 1.92
U2AF1-206ENST00000464750 FAM217AQ8IXS0 508 aa27.02■■□□□ 1.92
U2AF1-206ENST00000464750 CRACR2AQ9BSW2 395 aa27.02■■□□□ 1.92
U2AF1-206ENST00000464750 UBE2TQ9NPD8 197 aaPredicted RBP27.02■■□□□ 1.92
U2AF1-206ENST00000464750 CNTN6Q9UQ52 1028 aa27.02■■□□□ 1.92
U2AF1-206ENST00000464750 SLC27A6Q9Y2P4 619 aa27.02■■□□□ 1.92
U2AF1-206ENST00000464750 A0A1W2PQF6 199 aa27.01■■□□□ 1.91
U2AF1-206ENST00000464750 MSI1O43347 362 aaKnown RBP27.01■■□□□ 1.91
U2AF1-206ENST00000464750 GABRG2P18507 467 aa27.01■■□□□ 1.91
U2AF1-206ENST00000464750 MFAP3P55082 362 aa27.01■■□□□ 1.91
U2AF1-206ENST00000464750 MSANTD2Q6P1R3 559 aa27.01■■□□□ 1.91
U2AF1-206ENST00000464750 MLKLQ8NB16 471 aa27.01■■□□□ 1.91
U2AF1-206ENST00000464750 CLEC4CQ8WTT0 213 aa27.01■■□□□ 1.91
U2AF1-206ENST00000464750 RXFP3Q9NSD7 469 aa27.01■■□□□ 1.91
U2AF1-206ENST00000464750 CACNA2D2Q9NY47 1150 aa27.01■■□□□ 1.91
U2AF1-206ENST00000464750 NCOR2Q9Y618 2525 aa27.01■■□□□ 1.91
U2AF1-206ENST00000464750 CEP192Q8TEP8 1941 aa27■■□□□ 1.91
U2AF1-206ENST00000464750 GEN1Q17RS7 908 aa27■■□□□ 1.91
U2AF1-206ENST00000464750 MAP7D1Q3KQU3 841 aa27■■□□□ 1.91
U2AF1-206ENST00000464750 TCEAL6Q6IPX3 200 aa27■■□□□ 1.91
U2AF1-206ENST00000464750 TRIM65Q6PJ69 517 aa27■■□□□ 1.91
U2AF1-206ENST00000464750 CYP2U1Q7Z449 544 aa27■■□□□ 1.91
U2AF1-206ENST00000464750 FRMD1Q8N878 549 aa27■■□□□ 1.91
U2AF1-206ENST00000464750 DDI1Q8WTU0 396 aa27■■□□□ 1.91
U2AF1-206ENST00000464750 TCEAL3Q969E4 200 aa27■■□□□ 1.91
U2AF1-206ENST00000464750 ERLEC1Q96DZ1 483 aa27■■□□□ 1.91
U2AF1-206ENST00000464750 GABRG3Q99928 467 aa27■■□□□ 1.91
U2AF1-206ENST00000464750 MIS12Q9H081 205 aa27■■□□□ 1.91
U2AF1-206ENST00000464750 FBXO21O94952 628 aa26.99■■□□□ 1.91
U2AF1-206ENST00000464750 CAVIN2O95810 425 aa26.99■■□□□ 1.91
U2AF1-206ENST00000464750 LTFP02788 710 aa26.99■■□□□ 1.91
U2AF1-206ENST00000464750 DHPSP49366 369 aaPredicted RBP26.99■■□□□ 1.91
U2AF1-206ENST00000464750 BYSLQ13895 437 aaKnown RBP26.99■■□□□ 1.91
U2AF1-206ENST00000464750 KIAA1211LQ6NV74 962 aa26.99■■□□□ 1.91
U2AF1-206ENST00000464750 GJB7Q6PEY0 223 aa26.99■■□□□ 1.91
U2AF1-206ENST00000464750 ENOSF1Q7L5Y1 443 aa26.99■■□□□ 1.91
U2AF1-206ENST00000464750 IRF2BP1Q8IU81 584 aa26.99■■□□□ 1.91
U2AF1-206ENST00000464750 IPO4Q8TEX9 1081 aaKnown RBP26.99■■□□□ 1.91
U2AF1-206ENST00000464750 GOLGA1Q92805 767 aa26.99■■□□□ 1.91
U2AF1-206ENST00000464750 CALCOCO1Q9P1Z2 691 aa26.99■■□□□ 1.91
U2AF1-206ENST00000464750 MBD1Q9UIS9 605 aaPredicted RBP26.99■■□□□ 1.91
U2AF1-206ENST00000464750 CLEC4EQ9ULY5 219 aa26.99■■□□□ 1.91
U2AF1-206ENST00000464750 RAD54BQ9Y620 910 aa26.99■■□□□ 1.91
U2AF1-206ENST00000464750 MAP3K13O43283 966 aa26.98■■□□□ 1.91
U2AF1-206ENST00000464750 LIMK1P53667 647 aa26.98■■□□□ 1.91
U2AF1-206ENST00000464750 TPD52L1Q16890 204 aaPredicted RBP26.98■■□□□ 1.91
U2AF1-206ENST00000464750 DENND1BQ6P3S1 775 aa26.98■■□□□ 1.91
U2AF1-206ENST00000464750 GBP6Q6ZN66 633 aa26.98■■□□□ 1.91
U2AF1-206ENST00000464750 LPCAT2Q7L5N7 544 aa26.98■■□□□ 1.91
U2AF1-206ENST00000464750 ANKS1BQ7Z6G8 1248 aa26.98■■□□□ 1.91
U2AF1-206ENST00000464750 PIWIL1Q96J94 861 aaKnown RBP26.98■■□□□ 1.91
U2AF1-206ENST00000464750 CD248Q9HCU0 757 aa26.98■■□□□ 1.91
U2AF1-206ENST00000464750 ST7Q9NRC1 585 aa26.98■■□□□ 1.91
U2AF1-206ENST00000464750 GFRA2O00451 464 aa26.97■■□□□ 1.91
U2AF1-206ENST00000464750 ZBTB24O43167 697 aaPredicted RBP26.97■■□□□ 1.91
U2AF1-206ENST00000464750 MED7O43513 233 aa26.97■■□□□ 1.91
U2AF1-206ENST00000464750 TSPAN3O60637 253 aa26.97■■□□□ 1.91
U2AF1-206ENST00000464750 LETM1O95202 739 aaPredicted RBP26.97■■□□□ 1.91
U2AF1-206ENST00000464750 LATS1O95835 1130 aa26.97■■□□□ 1.91
U2AF1-206ENST00000464750 NDUFV2P19404 249 aa26.97■■□□□ 1.91
U2AF1-206ENST00000464750 SLC9A1P19634 815 aa26.97■■□□□ 1.91
U2AF1-206ENST00000464750 GNA15P30679 374 aa26.97■■□□□ 1.91
U2AF1-206ENST00000464750 ANP32AP39687 249 aaKnown RBP26.97■■□□□ 1.91
U2AF1-206ENST00000464750 GPD2P43304 727 aa26.97■■□□□ 1.91
U2AF1-206ENST00000464750 MTIF2P46199 727 aaKnown RBP26.97■■□□□ 1.91
U2AF1-206ENST00000464750 MPPE1Q53F39 396 aa26.97■■□□□ 1.91
U2AF1-206ENST00000464750 FAM81BQ96LP2 452 aa26.97■■□□□ 1.91
U2AF1-206ENST00000464750 STOML2Q9UJZ1 356 aa26.97■■□□□ 1.91
U2AF1-206ENST00000464750 CKAP5Q14008 2032 aa26.96■■□□□ 1.91
U2AF1-206ENST00000464750 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa26.96■■□□□ 1.91
U2AF1-206ENST00000464750 THAP12O43422 761 aa26.96■■□□□ 1.91
U2AF1-206ENST00000464750 HOXD9P28356 352 aaPredicted RBP26.96■■□□□ 1.91
U2AF1-206ENST00000464750 ZNF445P59923 1031 aa26.96■■□□□ 1.91
U2AF1-206ENST00000464750 APBA1Q02410 837 aa26.96■■□□□ 1.91
U2AF1-206ENST00000464750 MEA1Q16626 185 aa26.96■■□□□ 1.91
U2AF1-206ENST00000464750 IL31Q6EBC2 164 aa26.96■■□□□ 1.91
U2AF1-206ENST00000464750 ARMCX6Q7L4S7 300 aa26.96■■□□□ 1.91
U2AF1-206ENST00000464750 TMEFF1Q8IYR6 380 aa26.96■■□□□ 1.91
U2AF1-206ENST00000464750 UCMAQ8WVF2 138 aa26.96■■□□□ 1.91
U2AF1-206ENST00000464750 SLC2A11Q9BYW1 496 aa26.96■■□□□ 1.91
U2AF1-206ENST00000464750 ACP6Q9NPH0 428 aa26.96■■□□□ 1.91
U2AF1-206ENST00000464750 APEX2Q9UBZ4 518 aa26.96■■□□□ 1.91
U2AF1-206ENST00000464750 STON1Q9Y6Q2 735 aa26.96■■□□□ 1.91
U2AF1-206ENST00000464750 GTPBP10A4D1E9 387 aaKnown RBP26.95■■□□□ 1.9
U2AF1-206ENST00000464750 WASH3PC4AMC7 463 aa26.95■■□□□ 1.9
U2AF1-206ENST00000464750 IGLV3-27P01718 113 aa26.95■■□□□ 1.9
U2AF1-206ENST00000464750 RPL34P49207 117 aaKnown RBP26.95■■□□□ 1.9
U2AF1-206ENST00000464750 ARHGAP44Q17R89 818 aa26.95■■□□□ 1.9
U2AF1-206ENST00000464750 EXOC3L4Q17RC7 722 aa26.95■■□□□ 1.9
U2AF1-206ENST00000464750 DPCR1Q3MIW9 517 aa26.95■■□□□ 1.9
U2AF1-206ENST00000464750 ADGRF1Q5T601 910 aa26.95■■□□□ 1.9
U2AF1-206ENST00000464750 STPG1Q5TH74 334 aa26.95■■□□□ 1.9
U2AF1-206ENST00000464750 ZNF606Q8WXB4 792 aa26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms