RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 TPM1P09493 284 aa15.11■□□□□ 0.01
SQSTM1-205ENST00000464493 ADH5P11766 374 aa15.11■□□□□ 0.01
SQSTM1-205ENST00000464493 GBP1P32455 592 aa15.11■□□□□ 0.01
SQSTM1-205ENST00000464493 MATKP42679 507 aa15.11■□□□□ 0.01
SQSTM1-205ENST00000464493 GALK1P51570 392 aa15.11■□□□□ 0.01
SQSTM1-205ENST00000464493 PITX1P78337 314 aaPredicted RBP15.11■□□□□ 0.01
SQSTM1-205ENST00000464493 GAD2Q05329 585 aa15.11■□□□□ 0.01
SQSTM1-205ENST00000464493 C1QBPQ07021 282 aaKnown RBP15.11■□□□□ 0.01
SQSTM1-205ENST00000464493 PTP4A2Q12974 167 aa15.11■□□□□ 0.01
SQSTM1-205ENST00000464493 GAB4Q2WGN9 574 aa15.11■□□□□ 0.01
SQSTM1-205ENST00000464493 ANO4Q32M45 955 aa15.11■□□□□ 0.01
SQSTM1-205ENST00000464493 HGSNATQ68CP4 663 aa15.11■□□□□ 0.01
SQSTM1-205ENST00000464493 PPP1R2P3Q6NXS1 205 aa15.11■□□□□ 0.01
SQSTM1-205ENST00000464493 TPGS1Q6ZTW0 290 aa15.11■□□□□ 0.01
SQSTM1-205ENST00000464493 PHLDB2Q86SQ0 1253 aa15.11■□□□□ 0.01
SQSTM1-205ENST00000464493 CCDC105Q8IYK2 499 aa15.11■□□□□ 0.01
SQSTM1-205ENST00000464493 OLIG1Q8TAK6 271 aa15.11■□□□□ 0.01
SQSTM1-205ENST00000464493 SLC39A13Q96H72 371 aa15.11■□□□□ 0.01
SQSTM1-205ENST00000464493 FCRL2Q96LA5 508 aaPredicted RBP15.11■□□□□ 0.01
SQSTM1-205ENST00000464493 P2RY13Q9BPV8 354 aa15.11■□□□□ 0.01
SQSTM1-205ENST00000464493 FAM204AQ9H8W3 233 aa15.11■□□□□ 0.01
SQSTM1-205ENST00000464493 RRN3Q9NYV6 651 aa15.11■□□□□ 0.01
SQSTM1-205ENST00000464493 TMEM59LQ9UK28 342 aa15.11■□□□□ 0.01
SQSTM1-205ENST00000464493 MIA3Q5JRA6 1907 aa15.1■□□□□ 0.01
SQSTM1-205ENST00000464493 TMCO5BA8MYB1 307 aa15.1■□□□□ 0.01
SQSTM1-205ENST00000464493 DDX3XO00571 662 aaKnown RBP eCLIP15.1■□□□□ 0.013e-52■■■□□ 17.8
SQSTM1-205ENST00000464493 IRAK2O43187 625 aa15.1■□□□□ 0.01
SQSTM1-205ENST00000464493 HOXC11O43248 304 aaPredicted RBP15.1■□□□□ 0.01
SQSTM1-205ENST00000464493 LATS1O95835 1130 aa15.1■□□□□ 0.01
SQSTM1-205ENST00000464493 GZMAP12544 262 aa15.1■□□□□ 0.01
SQSTM1-205ENST00000464493 OPRD1P41143 372 aa15.1■□□□□ 0.01
SQSTM1-205ENST00000464493 SLC11A2P49281 568 aa15.1■□□□□ 0.01
SQSTM1-205ENST00000464493 GRSF1Q12849 480 aaKnown RBP eCLIP15.1■□□□□ 0.01
SQSTM1-205ENST00000464493 FZD5Q13467 585 aa15.1■□□□□ 0.01
SQSTM1-205ENST00000464493 EIF4EBP2Q13542 120 aaPredicted RBP15.1■□□□□ 0.01
SQSTM1-205ENST00000464493 TDRD12Q587J7 1177 aaKnown RBP15.1■□□□□ 0.01
SQSTM1-205ENST00000464493 ADGRF1Q5T601 910 aa15.1■□□□□ 0.01
SQSTM1-205ENST00000464493 MON1BQ7L1V2 547 aa15.1■□□□□ 0.01
SQSTM1-205ENST00000464493 ARCQ7LC44 396 aa15.1■□□□□ 0.01
SQSTM1-205ENST00000464493 FAM217AQ8IXS0 508 aa15.1■□□□□ 0.01
SQSTM1-205ENST00000464493 DRC7Q8IY82 874 aa15.1■□□□□ 0.01
SQSTM1-205ENST00000464493 CPXM2Q8N436 756 aa15.1■□□□□ 0.01
SQSTM1-205ENST00000464493 OR8K1Q8NGG5 319 aa15.1■□□□□ 0.01
SQSTM1-205ENST00000464493 CD101Q93033 1021 aa15.1■□□□□ 0.01
SQSTM1-205ENST00000464493 AZIN2Q96A70 460 aa15.1■□□□□ 0.01
SQSTM1-205ENST00000464493 CLDN23Q96B33 292 aa15.1■□□□□ 0.01
SQSTM1-205ENST00000464493 LMAN1LQ9HAT1 526 aa15.1■□□□□ 0.01
SQSTM1-205ENST00000464493 FBRSL1Q9HCM7 1045 aaKnown RBP15.1■□□□□ 0.01
SQSTM1-205ENST00000464493 DDIT4Q9NX09 232 aa15.1■□□□□ 0.01
SQSTM1-205ENST00000464493 TAS2R14Q9NYV8 317 aa15.1■□□□□ 0.01
SQSTM1-205ENST00000464493 STOML2Q9UJZ1 356 aa15.1■□□□□ 0.01
SQSTM1-205ENST00000464493 STAP1Q9ULZ2 295 aa15.1■□□□□ 0.01
SQSTM1-205ENST00000464493 SYNJ2BP-COX16A0A087WUM0 186 aa15.09■□□□□ 0.01
SQSTM1-205ENST00000464493 NEDD8-MDP1E9PL57 170 aa15.09■□□□□ 0.01
SQSTM1-205ENST00000464493 M0QYT0 321 aa15.09■□□□□ 0.01
SQSTM1-205ENST00000464493 FTLP02792 175 aaPredicted RBP15.09■□□□□ 0.01
SQSTM1-205ENST00000464493 CHRNB1P11230 501 aa15.09■□□□□ 0.01
SQSTM1-205ENST00000464493 DRD1P21728 446 aa15.09■□□□□ 0.01
SQSTM1-205ENST00000464493 HNRNPH3P31942 346 aaKnown RBP15.09■□□□□ 0.01
SQSTM1-205ENST00000464493 FLT3P36888 993 aa15.09■□□□□ 0.01
SQSTM1-205ENST00000464493 GSCP56915 257 aaPredicted RBP15.09■□□□□ 0.01
SQSTM1-205ENST00000464493 TSR1Q2NL82 804 aaKnown RBP15.09■□□□□ 0.01
SQSTM1-205ENST00000464493 ZC3H12AQ5D1E8 599 aaKnown RBP15.09■□□□□ 0.01
SQSTM1-205ENST00000464493 TMEM196Q5HYL7 178 aa15.09■□□□□ 0.01
SQSTM1-205ENST00000464493 DGKKQ5KSL6 1271 aa15.09■□□□□ 0.01
SQSTM1-205ENST00000464493 NAIF1Q69YI7 327 aaPredicted RBP15.09■□□□□ 0.01
SQSTM1-205ENST00000464493 VPS36Q86VN1 386 aa15.09■□□□□ 0.01
SQSTM1-205ENST00000464493 MCOLN2Q8IZK6 566 aa15.09■□□□□ 0.01
SQSTM1-205ENST00000464493 NAT16Q8N8M0 369 aa15.09■□□□□ 0.01
SQSTM1-205ENST00000464493 NT5C3BQ969T7 300 aa15.09■□□□□ 0.01
SQSTM1-205ENST00000464493 VCPIP1Q96JH7 1222 aa15.09■□□□□ 0.01
SQSTM1-205ENST00000464493 NPY6RQ99463 290 aa15.09■□□□□ 0.01
SQSTM1-205ENST00000464493 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.09■□□□□ 0.018e-12■■□□□ 13.9
SQSTM1-205ENST00000464493 BBS2Q9BXC9 721 aa15.09■□□□□ 0.01
SQSTM1-205ENST00000464493 METTL5Q9NRN9 209 aaKnown RBP15.09■□□□□ 0.01
SQSTM1-205ENST00000464493 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.09■□□□□ 0.013e-6■■□□□ 13.4
SQSTM1-205ENST00000464493 MARK1Q9P0L2 795 aa15.09■□□□□ 0.01
SQSTM1-205ENST00000464493 COX16Q9P0S2 106 aa15.09■□□□□ 0.01
SQSTM1-205ENST00000464493 DLGAP2Q9P1A6 1054 aa15.09■□□□□ 0.01
SQSTM1-205ENST00000464493 ACSL4O60488 711 aa15.08■□□□□ 0
SQSTM1-205ENST00000464493 RTN2O75298 545 aa15.08■□□□□ 0
SQSTM1-205ENST00000464493 APOEP02649 317 aa15.08■□□□□ 0
SQSTM1-205ENST00000464493 CYBBP04839 570 aa15.08■□□□□ 0
SQSTM1-205ENST00000464493 PLEKP08567 350 aaPredicted RBP15.08■□□□□ 0
SQSTM1-205ENST00000464493 SLC2A3P11169 496 aa15.08■□□□□ 0
SQSTM1-205ENST00000464493 KRT3P12035 628 aa15.08■□□□□ 0
SQSTM1-205ENST00000464493 TYRP14679 529 aa15.08■□□□□ 0
SQSTM1-205ENST00000464493 CCR1P32246 355 aa15.08■□□□□ 0
SQSTM1-205ENST00000464493 EIF2DP41214 584 aaKnown RBP15.08■□□□□ 0
SQSTM1-205ENST00000464493 MAGEA9P43362 315 aa15.08■□□□□ 0
SQSTM1-205ENST00000464493 RPS9P46781 194 aaKnown RBP15.08■□□□□ 0
SQSTM1-205ENST00000464493 SLC6A11P48066 632 aa15.08■□□□□ 0
SQSTM1-205ENST00000464493 SULT1E1P49888 294 aa15.08■□□□□ 0
SQSTM1-205ENST00000464493 ZNF75DP51815 510 aa15.08■□□□□ 0
SQSTM1-205ENST00000464493 NME3Q13232 169 aa15.08■□□□□ 0
SQSTM1-205ENST00000464493 CCINQ13939 588 aa15.08■□□□□ 0
SQSTM1-205ENST00000464493 LRRC32Q14392 662 aa15.08■□□□□ 0
SQSTM1-205ENST00000464493 ARID5BQ14865 1188 aa15.08■□□□□ 0
SQSTM1-205ENST00000464493 SLC25A52Q3SY17 297 aa15.08■□□□□ 0
SQSTM1-205ENST00000464493 FSTL4Q6MZW2 842 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms